Dissertations/Thesis

Clique aqui para acessar os arquivos diretamente da Biblioteca Digital de Teses e Dissertações da UFRRJ

2026
Thesis
1
  • RAFAEL FERREIRA DOS SANTOS
  • Chemical and Biological Study of Melipona mondury Geopropolis and Synthesis of Analogous Chalcones: Isolation, Characterization, and Structure-Activity Relationship

  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ROSANE NORA CASTRO
  • RENATA BARBOSA LACERDA
  • EDUARDO HILLMANN WANDERLIND
  • WANDA PEREIRA ALMEIDA
  • GILDA GUIMARÃES LEITÃO
  • DAVYSON DE LIMA MOREIRA
  • THATYANA ROCHA ALVES VASCONCELOS
  • Data: Jan 22, 2026


  • Show Abstract
  • Propolis is a natural resin produced by Africanized honeybees and stingless bees (SB), playing an essential role in the protection and organization of colonies. In the genus Melipona, this material is known as geopropolis, as it results from the combination of plant resins, waxes, salivary secretions, and inorganic materials such as soil and/or clay. This complex matrix acts in sealing crevices, reinforcing nest structure, mummifying intruders, and maintaining an aseptic internal environment, thereby contributing to colony health (Cardozo et al., 2015; Sousa et al., 2019).

    Since antiquity, bee products have been used in traditional medicine, mainly due to their therapeutic properties. Among these products, geopropolis has attracted increasing scientific interest because of the wide range of biological activities attributed to it, including antioxidant (De Souza et al., 2013; Dutra et al., 2014), anti-inflammatory (Franchin et al., 2012; 2013), gastroprotective (Ribeiro-Junior et al., 2015), antiviral (Coelho et al., 2015), antimicrobial (Sousa et al., 2019; Novaes & Torres, 2024), and antiproliferative activities (Cunha et al., 2013; Campos et al., 2014). Despite this potential, systematic studies on Brazilian geopropolis only began in the late 1990s, which explains the still limited knowledge regarding its chemical composition, biosafety, pharmacological properties, and possible biomarkers (Bankova et al., 1998; Cardozo et al., 2015).

    The chemical composition of (geo)propolis is notoriously complex and variable, being influenced by factors such as surrounding vegetation, seasonality, climatic conditions, soil type, and the genetic characteristics of the producing bees. In the case of stingless bees, this variability is even more pronounced due to the high diversity of species and the scarcity of consolidated data on the botanical sources exploited, which hinders the detailed chemical characterization of this matrix (Menezes, 2005).

    Previous studies have reported the presence of different classes of organic substances in the geopropolis of Melipona species, including prenylated benzophenones, phenolic compounds, di- and triterpenes, free and glycosylated flavonoids, phenolic acids, terpenic acids, saponins, aldehydes, and alcohols, as well as minerals derived from the soil incorporated into the matrix (Cardozo et al., 2015; Sousa et al., 2019; Silva et al., 2020). However, there are still few studies that systematically address the isolation, structural elucidation, and biological evaluation of the compounds responsible for the pharmacological activities attributed to geopropolis, especially that produced by Melipona mondury (Dos Santos et al., 2017; Dos Santos et al., 2025).

    In this context, the isolation and characterization of bioactive compounds from geopropolis are fundamental strategies to correlate specific metabolites with their possible botanical sources, thereby expanding the understanding of the plants visited by bees during resin collection. Moreover, the identification of these substances allows a more accurate assessment of their biological and biotechnological properties, providing support for the standardization of geopropolis, the establishment of quality and safety criteria, and its potential therapeutic and industrial applications.

    Advancing the chemical knowledge of geopropolis may also guide sustainable hive management practices and encourage the conservation of resin-producing plant species, promoting benefits for both biodiversity and meliponiculturists. However, the isolation of substances from this natural matrix poses significant challenges, as geopropolis is produced in limited quantities and exhibits high compositional variability, which hampers the reproducibility of isolation processes and the acquisition of sufficient amounts for structural and pharmacological studies (Magalhães & Venturieri, 2010; Gemim & Silva, 2017).

    Given these limitations, the synthesis of natural products and their analogues emerges as a strategic alternative in Natural Products Chemistry, enabling the production of larger quantities of bioactive compounds and the introduction of structural modifications aimed at studying structure–activity relationships. In this regard, chalcones—recognized as biosynthetic precursors of flavonoids and characterized by broad structural versatility and biological relevance—are promising synthetic models for investigating the mechanisms underlying the observed activities.

    Accordingly, this thesis is organized into two chapters. Chapter 1 addresses the isolation, chemical characterization, and evaluation of the biological properties of substances obtained from the geopropolis of the stingless bee Melipona mondury, collected in Bosque da Barra, Rio de Janeiro State, Brazil. Chapter 2 focuses on the synthesis of chalcones analogous to the flavonoids isolated from this matrix, aiming to investigate structure–activity relationships and to broaden the understanding of the mechanisms associated with the observed biological activities.

2025
Dissertations
1
  • JULIANA FERREIRA DOS SANTOS BRITO
  • Effect of Ezetimibe on cholesterol absorption through the Niemann Pick transporter as a tick control tool

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • EMERSON GUEDES PONTES
  • LUCIANO APARECIDO MEIRELES GRILLO
  • Petter Franco Entringer
  • RENATA BARBOSA LACERDA
  • Data: Feb 27, 2025
    Ata de defesa assinada:


  • Show Abstract
  • The use of chemical acaricides is the main method used to control tick infestations. However, a lack of knowledge or even incorrect use of these products leads to a tick population that is more resistant to acaricides, in addition to the environmental impact caused by these chemicals. Therefore, it is important to understand all the biological aspects of ticks to develop new control tools. There is much information about the lipid profile of other arthropods, but little is known about this profile in ticks. Ezetimibe is a drug widely used in the treatment of hypercholesterolemia that acts as a selective inhibitor of cholesterol absorption, impairing its transport. This study aimed to evaluate the viability and lipid profiles of embryonic cell lines of two tick species before and after ezetimibe treatment. To evaluate, through molecular modeling, the interaction of ezetimibe with the cholesterol transporter Niemann Pick of the two species. The cells used were BMP36 and IDE8 from Rhipicephalus (Boophilus) microplus and Ixodes scapularis, respectively. The 12-well plates containing target cells had a predefined concentration. After the formation of a confluent monolayer, the cells were treated with ezetimibe at three different concentrations (25, 50, and 100 μM) and evaluated at three different contact times (24, 48, and 72 h). Viability assays were performed, and the samples were subjected to lipid extraction and analysis by thin-layer chromatography. At 24 h, a decrease in the viability of the IDE8 lineage was observed only at the highest concentration; however, at 48 h, the concentration of 50 μM also showed a significant decrease. In the BMEP36 line, a significant decrease was observed only after 72 h of treatment at 100 µM. The lipid profile of the cell lines was determined, and the presence of cholesterol (CHO) and cholesterol esters (CHOE) was observed. It was observed that tick embryonic cells were influenced by the addition of the cholesterol inhibitor, and the levels of cholesterol and cholesterol ester were reduced. Evaluating the results, it was concluded that the lipid profile found in embryonic cells of different tick lineages was similar to that found in the tick fat body. Therefore, ezetimibe, a substance used to inhibit cholesterol absorption in humans, inhibits cholesterol absorption and affects cholesterol ester levels in tick cells in vitro. Finally, a theoretical molecular docking study was performed using the ChemScore scoring function to observe the interaction of ezetimibe with cholesterol transporter models of both ticks constructed from the human Niemann-Pick C1 protein (NPC1L1) template. It was found that the ligand interacts favorably with the protein present in the cholesterol metabolism of ticks, with a slight advantage in the interaction with the I. scapularis model. However, studies of the energy involved in the formation of these complexes can provide more complete data.

2
  • AYLLA LOPES HAICK
  • ISOLATION AND STRUCTURAL ELUCIDATION OF SPECIAL METABOLITES FROM THE LEAVES of Ouratea polygyna Engl. AND EVALUATION OF BIOLOGICAL ACTIVITIES

  • Advisor : MARIO GERALDO DE CARVALHO
  • COMMITTEE MEMBERS :
  • GILDA GUIMARÃES LEITÃO
  • LUCAS SILVA ABREU
  • LUCIANO RAMOS SUZART
  • MARIO GERALDO DE CARVALHO
  • THIAGO WOLFF
  • Data: Apr 30, 2025
    Ata de defesa assinada:


  • Show Abstract
  • This work describes the phytochemical study of leaves of Ouratea polygyna Engl., that belong to Ochnaceae family. The plant material was collected at the Vale do Rio Doce Natural Reserve (RNV), in Linhares-ES and registered in the RNV herbarium. The crude extract of the leaves was prepared by maceration at room temperature with P.A methanol and concentrated in a rotary evaporator. The crude extract was partitioned with different organic solvents: hexane, dichloromethane, ethyl acetate and methanol, generating their respective partitions. From the hexane partition, were isolated the substances friedelin (1) and β-sitosterol (2). From the dichloromethane partition, were isolated the substances 7,7’’,4’’’-tri-O-methyl-lanaraflavone (3) and 3-β-O-β-Dglucopyranosyl sitosterol (4). From the ethyl acetate partition, amentoflavone (5), 5,4'- dihydroxy-6,7,3',6'-tetramethoxyisoflavone (6), lanceoloside A (7), a mixture of (7+8), being (8) the glycosylated derivative of benzoic acid and 3'-O-β-D-glucopyranosyl-5- hydroxy-6,7,4',5'-tetramethoxyisoflavone (9). All substances were elucidated through analysis of one-dimensional and two-dimensional 1H and 13C Nuclear Magnetic Resonance experiments and comparison with literature data. The substances 7,7’’,4’’’- tri-O-methyl-lanaraflavone (3), 5,4’-dihydroxy-6,7,3’,6’-tetramethoxy-isoflavone (6) and 3’-O-β-D-glucopyranosyl-5-hydroxy-6,7,4’,5’-tetramethoxyisoflavone (9) have not been found in the literature to date. Amentoflavone was tested in Huh-7 cell line for hepatocarcinoma and larvicidal activity against Aedes Aegypti and the glycosylated substances were investigated in silico for action on the 3CLPRO protein of SARS-COV- 2

3
  • KARINE FALCÃO DOS SANTOS
  • Influence of butyrate on processes related to autophagic metabolism in Saccharomyces cerevisiae cells

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • ANA LUCIA TAVARES GOMES
  • CRISTIANO JORGE RIGER
  • DANIELA COSENTINO GOMES
  • MARCO ANDRE ALVES DE SOUZA
  • MARCOS DIAS PEREIRA
  • Data: Jun 18, 2025
    Ata de defesa assinada:


  • Show Abstract
  • Butyrate is a metabolite generated from the fermentation of dietary fibers by intestinal bacteria, and it can be utilized in various metabolic pathways of eukaryotic cells. Autophagy is one of the main intracellular degradation pathways, involving the removal of cytoplasmic components detrimental to cells. Dysfunctions in this pathway are correlated with the onset and progression of various pathologies, such as cancer and neurodegenerative diseases. This study aimed to evaluate the influence of butyrate on steps of the autophagic process using Saccharomyces cerevisiae cells deficient in proteins essential for autophagy maintenance (Δatg8, Δgcn4, and Δpep4). Analysis of butyrate toxicity in the control strain, assessed by growth curves and cell viability, demonstrated no toxic effect within concentrations ranging from 50μM to 200μM. In assays with mutant strains at a butyrate concentration of 100μM, cells from the Δgcn4 and Δpep4 strains exhibited reduced metabolic activity. Upon autophagy induction by nitrogen starvation, it was observed that after 4h, there was no alteration in cell viability with butyrate exposure. However, after 24h, the Δgcn4 and Δpep4 strains showed a reduction in cell viability, a behavior associated with an increased frequency of petite colonies and elevated levels of intracellular oxidation. It is concluded that, under normal conditions, butyrate is not cytotoxic, but under autophagy induction, the Δgcn4 and Δpep4 strains demonstrated lower tolerance to low-concentration butyrate exposure and increased oxidative stress.

4
  • EMANOELLE PEIXOTO ALENCAR DO NASCIMENTO
  • EVALUATION OF THE EFFECT OF ALKALINE SALTS TO INCREASE THE CATALYTIC EFFICIENCY OF QUICKLIME IN THE SYNTHESIS OF METHYL BIODIESEL

  • Advisor : JOSE GERALDO ROCHA JUNIOR
  • COMMITTEE MEMBERS :
  • IDIO ALVES DE SOUSA FILHO
  • JOSE GERALDO ROCHA JUNIOR
  • LUIZ FERNANDO SILVA CALDAS
  • Data: Jul 9, 2025
    Ata de defesa assinada:


  • Show Abstract
  • Biodiesel is a renewable alternative to fossil diesel and has been progressively incorporated into the energy matrix. Its synthesis mainly occurs through the transesterification reaction of vegetable oils with short-chain alcohols, in the presence of catalysts. Homogeneous basic catalysts, such as NaOH and NaOCH3, are widely used, but some drawbacks have motivated the study of heterogeneous catalysts, such as CaO. This work investigates the influence of alkaline salts on the conversion of biodiesel synthesis catalyzed by quicklime. The reaction was carried out at 60 °C for 120 minutes, with and without the additives CH3CO2Na, CH3CO2K, NaCl, and KCl A total of 45.0 g of soybean oil, 1.6 g of quicklime (both calcined and uncalcined), 3.0 mmol of additive, and a molar ratio of methanol:oil of 4:1 were used. A factorial design 2³ with a central point, using CH3CO2Na and calcined lime, evaluated the effects of reaction time (60 and 180 min), additive percentage (0.17 %m/m and 0.93 %m/m), and catalyst percentage (1.7 %m/m and 5.3 %m/m). The conversion with uncalcined lime was 45%, increasing to 93.7%, 91.3% and 62.0% with the additives CH3CO2Na, CH3CO2K, and NaCl, respectively. The addition of KCl reduced the conversion to 17%. Calcining the lime increased the conversion to 72%. With the calcined lime and additives, the conversions were 92.4% (CH3CO2Na), 93.5% (CH3CO2K), 93.7% (NaCl), and 90.2% (KCl). It was observed, through the conversions, that CH3CO2Na and CH3CO2K allow to forgo calcination. The conversions obtained in the factorial design varied from 77.59% to 92.95%. The three main effects and the time*additive and time*catalyst interactions were statistically significant (α = 0.05). The maximum conversion (92.95%) was achieved with 5.3 %m/m of catalyst and 0.93 %m/m of additive, after 60 minutes of reaction, at a molar ratio of methanol:oil 4:1.

5
  • BÁRBARA DE SOUZA CARDOSO
  • The Role of the NADPH Oxidases Inhibitors VAS2870, Setanaxib and GKT in the Activities of the LFR1 of Leishmania amazonensis and Possible Influence on Infection and Differentiation of the Parasite

  • Advisor : DANIELA COSENTINO GOMES
  • COMMITTEE MEMBERS :
  • MICHELLE TANNY CUNHA DO NASCIMENTO
  • DANIELA COSENTINO GOMES
  • MARCO ANDRE ALVES DE SOUZA
  • MARCO EDILSON FREIRE DE LIMA
  • SUZETE ARAUJO OLIVEIRA GOMES
  • Data: Jul 11, 2025


  • Show Abstract
  • The species Leishmania amazonensis occurs in various parts of Brazil and is the causative agent of Cutaneous Leishmaniasis, transmitted by phlebotomine insect vectors to vertebrate hosts. During the parasite’s life cycle, there is an alternation between the promastigote forms, present in the vector, and the intracellular infective amastigote forms, which arise from the differentiation of metacyclic promastigotes within the mammalian host. Recently, it has been described that the ferric reductase enzyme (LFR1) of L. amazonensis, when activated by heme, can also function as a NADPH oxidase (NOX). This bifunctional enzyme appears to be involved in the parasite’s differentiation process and may constitute a new pharmacological target. NOXs are involved in various pathologies such as cancer, cardiac, and neurodegenerative diseases; therefore, there is an intense search for drugs that inhibit the activity of these enzymes. Some of these inhibitors are commercially available, such as Setanaxib, GKT136901, and VAS2870. In this context, in order to investigate whether LFR1 could be a target for drug therapy against leishmaniasis, this study aims to analyze the effect of Setanaxib, GKT136901, and VAS2870 on the activities of LFR1 from L. amazonensis and to assess their effects on the proliferation, differentiation, and infectivity of the parasites, as well as to perform an in silico analysis of the interaction of these inhibitors with LFR1. Preliminary results using the Amplex Red® reagent to measure heme-dependent H2O2 production showed that Setanaxib at 15 µM, GKT136901 at 2.5 µM, and VAS2870 at concentrations as low as 1 µM were able to completely abolish NOX activity. The cytotoxic effect of these inhibitors against promastigote forms was also evaluated through the MTT assay, in which only VAS2870 exhibited toxic effects, showing a loss of 20% and 90% in cell viability in the presence of 10 µM of the inhibitor after 24 h and 72 h, respectively. Regarding the ferric reductase activity of LFR1, measured through a colorimetric method with the (K3Fe(CN)6) reagent, the promising inhibitor VAS2870 at 1 µM did not show a significant inhibitory effect but inhibited this activity at concentrations above 5 µM. The in silico study, which aimed to demonstrate the possible interaction between VAS2870 and the dehydrogenase domain of LFR1 modeled comparatively, showed that this inhibitor interacts covalently and stably with the enzyme’s active site. In axenic cultures that stimulate promastigote-to-amastigote differentiation, VAS2870 appears to act by inhibiting this process at non-cytotoxic concentrations, although it did not exert an effect on L. amazonensis infection in murine macrophages. These results suggest that VAS2870 can act on both activities of LFR1, exerting effects on the life cycle of L. amazonensis. Furthermore, the possibility of deeper studies regarding the effects of these and other NOX inhibitors on LFR1 is not excluded.

6
  • SARAH HESSING LOUZADA
  • Identification of Allosteric Ligands of Dengue Virus Polymerase Using SBDD and FBDD Strategies

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • RENATA BARBOSA LACERDA
  • MAGALY GIRÃO ALBUQUERQUE
  • Data: Sep 16, 2025


  • Show Abstract
  • Dengue is an arbovirus endemic to tropical and subtropical regions. The incidence of dengue has increased in recent decades, particularly due to climate change. This represents a serious public health problem, exacerbated by the lack of licensed antivirals. Nonstructural protein 5 (NS5), which acts as an RNA-dependent RNA polymerase (RdRp), is essential for viral replication. It is highly conserved across serotypes and has no homologues in humans, making it a strategic target for drug development. In this study, we applied a virtual screening approach based on structure docking to identify ligands for the allosteric N site of NS5. A novel, non-commercial chemical library consisting of 657 compounds derived from dissertations and theses from the Graduate Program in Chemistry at UFRRJ was used. The screening was conducted with the GOLD 2023.2.0 program, ChemPLP scoring function, using the ensemble docking technique. The scores obtained were normalized by molecular mass and surface area to select fragments (mass <300 Da) and by √N (number of non-hydrogen atoms) to reduce bias related to molecular size. Twenty-three compounds were selected, 17 fragments and 5 larger molecules. Cinnamic acid, the best fragment in the mass criterion, was optimized by fragment growth techniques, generating the ligand (E)-3-(3-(2-carboxyvinyl)phenoxy)benzoic acid as the most promising derivative. The larger compounds stood out for establishing relevant interactions with key residues of the site, such as Arg729, Thr794, Trp795, and His800, including hydrogen bonds and cation–π interactions. Interaction enthalpies were estimated using the semiempirical PM7 method (MOPAC2016), considering implicit solvent, revealing very interesting values, up to -96 kcal/mol for (E)-3-(3-(2-carboxyvinyl)phenoxy)benzoic acid, which exceeds the value of the reference inhibitors. Among the larger compounds, two fully comply with Lipinski's rules, suggesting potential for oral administration and predicted toxicity comparable to or better than that of known inhibitors. In this context, the PPGQ2000701 series stands out. Fragment optimization also led to an improvement in the pharmacokinetic profile, eliminating the predicted interaction with CYPs. The results indicate that compounds from the PPGQ-UFRRJ library are promising candidates for DENV NS5 inhibitors and promising starting structures for rational drug design. Furthermore, FBDD techniques proved effective in improving the interaction and pharmacokinetic profiles of the ligands.

7
  • MAURICIO ROCHA DE BRITO
  • COMPOSITES BASED ON NIOBIUM AND NON-NOBLE METALS AS PHOTOCATALYSTS UNDER VISIBLE LIGHT

  • Advisor : EDUARDO HILLMANN WANDERLIND
  • COMMITTEE MEMBERS :
  • ANTONIO MARQUES DA SILVA JUNIOR
  • EDUARDO HILLMANN WANDERLIND
  • GUILHERME PEREIRA GUEDES
  • Data: Oct 16, 2025


  • Show Abstract
  • Aiming at the synthesis of new visible-light active photocatalysts, this work focused on preparing six photocatalytic composites based on three crystallographic morphologies of niobium pentoxide combined with non-noble metals (aluminum or copper). The synthetic procedure involved preparing an organic matrix of fructose-derived oligomers with non-noble metal precursor salts in an ethylene glycol medium, followed by addition of an Nb₂O₅/ethylene glycol suspension at 105 °C. Bandgap energies were determined using the Tauc plot method from UV-Vis diffuse reflectance spectroscopy data, showing that all composites exhibit visible-light range bandgaps (1.79~2.47 eV), significantly lower than those of the precursor oxides (2.93~3.53 eV). Urbach energy values (0.295~0.538 eV for composites vs. 0.080~0.129 eV for precursors) further supported the enhanced photocatalytic potential. Photocatalytic activity was evaluated in aqueous medium through decolorization of rhodamine B dye aqueous solutions under irradiation by a 100 W white LED (6500 K). All composites demonstrated superior decolorization efficiencies compared to their respective pristine oxides after 2 h. A brief discussion of the catalytic mechanism was provided, identifying the Al/Fru@Up composite as the most promising candidate for optimization (originally achieving 70.4% decolorization), with the optimized Al/Fru@Up½ variant showing similar performance (73.4%). Adsorption assays were subsequently performed, highlighting numerical approaches for kinetic analysis and suggesting a two-step adsorption mechanism per site. Finally, preliminary theoretical studies were conducted using density functional theory (time-dependent and stationary cases) to investigate the fructose transformation mechanism and to determine the optical properties of 5-hydroxymethylfurfural, a possible key intermediate.

8
  • ADRIELE DE OLIVEIRA BATISTA
  • Photocatalytic degradation of Rhodamine 6G using silver-modified lithium niobate perovskite.

  • Advisor : JOSE CARLOS NETTO FERREIRA
  • COMMITTEE MEMBERS :
  • EDUARDO HILLMANN WANDERLIND
  • Evelyn Christyan da Silva Santos
  • IDIO ALVES DE SOUSA FILHO
  • JOSE CARLOS NETTO FERREIRA
  • Rodrigo da Silva Souza
  • Data: Dec 16, 2025


  • Show Abstract
  • The perovskite structure is recognized for its remarkable properties in solidmaterial chemistry. Recently, research has focused on high-performance photocatalytic technologies for environmental recovery and sustainable energy generation. Rhodamine 6G (Rh-6G) is a widely used synthetic dye, but it is poorly biodegradable and polluting. When released into water, it can harm aquatic fauna and flora. Due to its stability and toxicity, it is frequently studied in photodegradation to reduce environmental impacts. Interest in photocatalysis has driven studies of perovskites such as NaNbO₃, KNbO₃, and LiNbO₃, due to their photocatalytic properties and band gap tunability. In this work, the modification of LiNbO₃ with silver was evaluated on the photocatalytic efficiency to degrade Rhodamine 6G under visible light. The photocatalytic capabilities of LiNbO₃ and Li(1-x)Ag(x)NbO₃ perovskites with silver concentrations of 5%, 10%, 20%, 30% and 40% in mol were analyzed. Photodegradation of Rh-6G was performed under visible light, using a xenon lamp (300W, 400nm filter) or blue LED (10W, 440nm). The dye calibration curve was constructed to determine the molar absorptivity coefficient, with maximum absorbance at 526nm. A concentration of 10mgL⁻¹ was used, followed by adsorption in the dark for 2h. Photocatalysis occurred under visible light for 120min, with measurements every 15min. Modification of LiNbO₃ with silver increased the photocatalytic capacity, reducing the band gap from 4.10 eV to 2.65–2.82 eV, facilitating electronic excitation. The insertion of silver into the LiNbO₃ structure made the material more reactive, achieving approximately 76% degradation in 120 minutes under irradiation with a xenon lamp and approximately 97% with a blue LED, in the same time interval. The observed kinetics were pseudo-first order for all materials analyzed, with Ag30% being the most reactive in the established period, with values of k = 0.01093 min⁻¹ for irradiation with a 300 W xenon lamp and k = 0.03644 min⁻¹ for irradiation with a 10 W blue LED. Tests with reactive species scavengers showed that the superoxide radical exerts the greatest effect in preventing photodegradation, both for LiNbO₃ and Ag30%. Conduction-band electrons react with dissolved oxygen, forming superoxide radicals that oxidize the pollutant or generate secondary species that promote its conversion to CO₂ and water. Thus, modifying LiNbO₃ with silver proves an effective strategy for developing photocatalysts for the degradation of organic pollutants in water.

Thesis
1
  • CRISTIANE CARDOSO DOS SANTOS
  • Isolation and biological evaluation of special metabolites from green propolis by countercurrent chromatography

  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • DAVYSON DE LIMA MOREIRA
  • LUCAS SILVA ABREU
  • MARIA RAQUEL FIGUEIREDO
  • REGINA VICENZI OLIVEIRA
  • RODRIGO RODRIGUES DE OLIVEIRA
  • ROSANE NORA CASTRO
  • Data: Feb 10, 2025
    Ata de defesa assinada:


  • Show Abstract
  • Green propolis, a widely recognised Brazilian apicultural product, has been the focus of scientific research for its promising medicinal properties and benefits, particularly in the fight against SARS-CoV-2 and cancer. The importance of characterising the bioactive chemical constituents present in this resin produced by honeybees cannot be underestimated, as its chemical composition is remarkably complex, requiring several steps to effectively isolate the main substances. In this context, the choice of an isolation method that reduces costs, long execution times and significant sample losses is crucial. Countercurrent chromatography (CCC), a liquid-liquid partition technique characterised by full recovery of the analyte without the need for solid supports, is emerging as a suitable alternative. Thus, in the present study, both the hexane (HEGP) and ethanol (EEGP) extracts of green propolis were evaluated with the aim of isolating, with a higher degree of purity, prenylated substances, especially artepillin C, baccharin and chromene. The fractionation of HEGP involved two different isocratic chromatographic procedures, one with normal elution mode and the other with reverse elution, using hexane-ethanol-water 4:3:1 (v/v) as a biphasic solvent system. The results obtained for the isolation of the compounds in the hexane extract were different, with the normal elution mode promoting greater selectivity for baccharin (89% purity) and artepillin C (93% purity), whereas in the reverse mode chromene stood out with 96% purity. In addition, the isolated substances were tested for inhibition of the interaction between the receptor binding domain (RBD) of the spike protein and the ACE2 protein receptor, which was evaluated by the Lumitᵀᴹ immunoassay, showing that bacharin and artepillin C exhibited significant inhibitory activities, with 51% and 67% inhibition, respectively, at concentrations of 10 μM. With regard to the fractionation of EEGP, particular attention was paid to the methodology for the isolation of artepillin C. For this purpose, the solvent system of hexane-ethyl acetate (8:2) and 4% aqueous sodium bicarbonate (1:1) was used in the reverse elution mode, resulting in artepillin C with 82% purity.These fractionations were monitored by LCQTOF fingerprinting, providing an effective parameter for monitoring the separation. As part of the phytochemical study, the ethanol extract of green propolis (EEGP), substances such as anacardic acid, capillartemisin, p-coumaric acid, aromadendrin, betuletol and kaempferide were also isolated using multidimensional countercurrent chromatography (MDCCC), alternating aqueous and non-aqueous solvent systems and tested in vitro in breast cancer (MCF-7 e MDA-MD-231). Baccharin showed promising preliminary results on aggressive breast cancer (MDA) strains. Thus, the results obtained for the isolation of specific metabolites from green propolis demonstrate the potential of the CCC technique and offer new perspectives in the field of natural products for the isolation of bioactive substances with high purity in order to evaluate their biological potential.

2
  • FELIPE MARINHO FERNANDES
  • DESCRIPTION OF THE OXYGEN EVOLUTION REACTION ON THE (101) AND (100)
    TiO2 SURFACE.
  • Advisor : CLARISSA OLIVEIRA DA SILVA
  • COMMITTEE MEMBERS :
  • ALEXANDRE AMARAL LEITÃO
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • CLARISSA OLIVEIRA DA SILVA
  • FELIPE FANTUZZI SOARES
  • LUCAS MODESTO DA COSTA
  • MARCELO HAWRYLAK HERBST
  • MARCIO SOARES PEREIRA
  • RICARDO RODRIGUES DE OLIVEIRA JUNIOR
  • Data: Apr 16, 2025
    Ata de defesa assinada:


  • Show Abstract

  • The oxygen evolution reaction (OER) is the rate-limiting step of water electrolysis and is essential for sustainable hydrogen production. In this work, we investigate the OER on the (101) and (100) surfaces of TiO₂ in the anatase phase, using Density Functional Theory (DFT) calculations to determine thermodynamic and kinetic profiles of the reaction. The analysis of the Gibbs free energies showed that the (100) surface presents a lower thermodynamic overpotential (2.32 V), while the (101) surface exhibits a slightly higher value (2.85 V). However, when considering the activation barriers for the elementary steps of the OER, it was observed that the (101) surface has lower energy barriers, ranging from 0.87 eV to 1.18 eV, while, on the (100) surface, these barriers are significantly higher, reaching up to 2.84 eV. The absence of an activation barrier in the formation of the OOH* intermediate on the (101) surface is one of the factors that favor its greater catalytic efficiency. The scaling relationship between the OOH* and OH* intermediates was analyzed, indicating that the free energy difference between these intermediates remains close to 3.2 eV, which imposes an intrinsic limitation on the catalytic performance. The overestimation of the energy of the O₂* intermediate in the DFT calculations was corrected by adopting an adjustment based on the expected thermodynamic value for the formation of molecular oxygen (4.92 eV), avoiding distortions in the energy profile of the reaction. The results indicate that the isolated evaluation of the thermodynamic overpotential can lead to inaccurate conclusions about the catalytic efficiency, reinforcing the need to also consider the kinetic aspects of the reaction. Thus, the (101) surface of anatase TiO₂ stands out as the most efficient for OER, providing valuable information for the rational design of new catalytic materials aiming at optimizing the energy conversion in electrochemical devices.

3
  • NATHALIA FONSECA NADUR
  • Structural Optimization of 7-((piperidin-1-yl)alkoxy)-coumarins: Homologation and Construction of Mimetic Heterocycles Aiming at the Development of Novel Mixed Cholinesterase Inhibitors

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • GUILHERME DA SILVA CALEFFI
  • ARTHUR EUGEN KUMMERLE
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • MARINA AMARAL ALVES
  • PEDRO DE SENA MURTEIRA PINHEIRO
  • Data: Jul 10, 2025


  • Show Abstract
  • Alzheimer's disease (AD) is characterized by being a progressive and irreversible neurodegenerative disorder of memory and other cognitive functions, affecting occupational and social functioning. The use of compounds involving multitarget-directed ligands (MTDLs), such as mixed inhibitors of the enzyme acetylcholinesterase (AChE) that indirectly suppress aggregation of β-amyloid (Aβ) or combine cholinesterase (ChEs) inhibition with other mechanisms, has been observed as a high-value objective for AD treatment due to possibility to inhibit simultaneously different targets that contribute to installation and maintenance of the disease. Recently, our research group (LaDMol-QM) described two classes of coumarins (22 and 23a-b) that exhibited mixed inhibitory activity, acting on both CAS and PAS simultaneously, with IC50 values of up to 20 nM on AChE and selectivities of up to 354-fold on butyrylcholinesterase (BChE). Based on the pharmacophoric map of these series, this work has as its general objective the design, synthesis, and pharmacological evaluation of a series of benzyl-triazole-coumarins and coumarin mimetic heterocycles as possible mixed inhibitors of the AChE enzyme. Three series were proposed: the first, an optimization of the triazole-coumarin series involving the synthesis of new benzyl derivatives (series A); the second, a series with mimetic heterocycles, including quinolinone (series B) and aminoquinazoline (series C). The synthesis of series A, a superior homolog of series 23, was completed after ten synthetic steps, leading to the production of tem new derivatives of the triazole-coumarin series (24a-j), in which all compounds were able to inhibit AChE with IC50 values ranging from 4.2 to 103.8 nM and selectivities of up to 685-fold against BChE. The molecular docking study showed consistency with the results of the enzymatic kinetics study of triazole-coumarin compounds, which classified them as mixed-type inhibition. The multitarget potential of series A was demonstrated by the results obtained against hH3R, MAO-A, and MAO-B. The synthesis of series B, a classical bioisostere of series 22, was completed after six synthetic steps, leading to the production of seven new quinolinone derivatives (56a-g), which demonstrated a dual inhibition profile of cholinesterases (ChEs). Molecular docking studies elucidated the distinct inhibition mechanisms observed for the B series derivatives. The synthesis of the C series, a non-classical bioisostere of the 22 series, was performed in a convergent manner after obtaining the two main reaction building blocks, phenol-2-amino quinazoline and chloroalkyl piperidine hydrochloride, leading to the production of two new derivatives of the amino quinazoline series (65a-b), which were shown to be capable of inhibiting BChE. The molecular docking study showed consistency with the results of the enzyme kinetics study, which classified them as mixed-type inhibition.

4
  • MARIELE RONDON SANTOS GONÇALVES
  • Phytochemical study and evaluation of biological activities of Galianthe matogrossiana E.L. Cabral (Rubiaceae) and Crateva tapia L. (Capparaceae); contribution to the structural elucidation of a new alkaloid isolated from Justicia wasshauseniana Profice (Acanthaceae)

  • Advisor : MARIO GERALDO DE CARVALHO
  • COMMITTEE MEMBERS :
  • ALAÍDE DE SÁ BARRETO
  • BRUNO GUIMARAES MARINHO
  • JULIO CESAR ESCALONA ARRANZ
  • MARIO GERALDO DE CARVALHO
  • THIAGO WOLFF
  • Data: Aug 28, 2025
    Ata de defesa assinada:


  • Show Abstract
  • This thesis integrates a phytochemical study and evaluation of some biological activities of two Neotropical species: Galianthe matogrossiana E.L. Cabral (Rubiaceae) and Crateva tapia L. (Capparaceae). It details the definition of the molecular structure of a new alkaloid isolated from Justicia wasshauseniana Profice (Acanthaceae). In addition to describing the experimental procedures of isolation, the identification of molecular structures of special metabolites are described. Chromatographic techniques and detailed NMR and MS spectral analyses were used in this work. Biological activities such as anti-nociceptive, anti-inflammatory, and antioxidant activities were evaluated. Twenty-one compounds were identified in the nonpolar fractions of roots and aerial parts of G. matogrossiana, including fatty acid, anthraquinone, chalcone and coumarin derivatives, benzoic acid derivatives, steroids, and some pentacyclic triterpenes. In vivo assays (abdominal writhing, formalin, and open field in Swiss mice), with the exception of the hexane root fraction, the other fractions showed strong antinociceptive and anti-inflammatory activity, even superior to morphine. Antioxidant activity, performed in vitro (wild-type and Δyap1 strains of Saccharomyces cerevisiae), revealed that the hexane and dichloromethane fractions are potent radical scavengers. 3O-acetyl oleanolic acid inhibited Trypanosoma cruzi amastigotes (IC50 = 11.06 µM; selectivity = 3.11). Preliminary molecular docking studies suggested promising affinity of triterpenes against Aurora B kinase for anticancer applications. The in vitro antiglycation activity of the crude bark extract of C. tapia was evaluated, but was not very significant. Until now, glycosylated sitosterol and lupeol have been isolated from the dichloromethane fraction. Detailed discussion of the spectrometric data of the alkaloid, previously isolated from J. wasshauseniana, including TD DFT calculations, has defined its molecular structure, including absolute stereochemistry, which was named as "Brazoid E". These results provide insight into the phytochemical composition and biological activities of species with no record study in the literature.

5
  • IGOR RESENDES BARBOSA
  • PLANNING, OBTAINING AND BIOLOGICAL EVALUATION OF NEW PIRIMIDONE-N-ACYL-HYDRAZONES HYBRIDS WITH POTENTIAL ACTIVITY AGAINST CHIKUNGUNYA VIRUS

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • MARCUS VINICIUS NORA DE SOUZA
  • MARIO GERALDO DE CARVALHO
  • NATÁLIA DRUMOND LOPES
  • Data: Oct 23, 2025


  • Show Abstract
  • Chikungunya is a viral disease transmitted to humans by the bite of mosquitoes of the genus Aedes. Although the disease remained restricted to a few Asian and African territories for many years, from the early 2000s it spread to new geographic regions, putting an even greater number of individuals at risk. The main symptoms of this infection include fever, rashes and joint pain, which is often chronic and debilitating. In the Americas, the number of cases and deaths associated with Chikungunya virus infection have increased over the years, occurring mainly in Brazil and Paraguay. Recently, the FDA approved a single-dose vaccine for use in people 18 years of age and older. This vaccine is still undergoing clinical studies in Brazil, which should be completed in early 2024. Despite the encouraging results of this new vaccine, it is possible that mutant strains capable of evading the immune response, totally or partially, will emerge in the future. Therefore, it is necessary to develop drugs that are active against the virus to be added to the arsenal of measures against the disease. In this sense, the non-structural protein 3 (nsP3) of the Chikungunya virus has been considered an attractive biological target, as it has been shown to be essential for viral replication and virulence in several studies. Molecular fragments containing 2-pyrimidone-4-carboxylic acid as a common structural unit were previously identified in the literature as ligands and potential inhibitors of Chikungunya virus nsP3. Thus, this Project presents the rational planning for the synthesis of three unprecedented series of compounds based on the pyrimidone ring as potential anti-Chikungunya agents. The planned compounds have an N-acylhydrazone in their structure, a group previously identified in compounds with various biological activities, including antiviral. After obtaining them, the cytotoxicity of the compounds will be evaluated in Vero cells, and the antiviral activity will be evaluated in Vero cells infected by the Chikungunya virus. Finally, the experimental results will be correlated with Molecular Anchoring studies between these compounds and the macro domain of the nsP3 protein.

6
  • LUAN VALIM DOS SANTOS
  • Effects of morin hydrate on the development and metabolism of Aedes aegypti.

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • KATIA CALP GONDIM
  • ADEMIR DE JESUS MARTINS JUNIOR
  • JORGE LUIZ DA CUNHA MORAES
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • EMERSON GUEDES PONTES
  • MARCO EDILSON FREIRE DE LIMA
  • PATRICIA FAMPA NEGREIROS LIMA
  • RENATA BARBOSA LACERDA
  • Data: Nov 27, 2025


  • Show Abstract
  • Aedes aegypti is the primary vector of arboviruses with major public health impact, such as dengue, Zika, chikungunya, and Mayaro fever, being capable of adapting to diverse environments and developing resistance to synthetic insecticides. In this context, natural compounds such as flavonoids emerge as promising alternatives for integrated vector management. Morin hydrate, a plant-derived flavonol, has been investigated for its pharmacological properties, but its effects on insect vectors remain poorly understood. The aim of this study was to comprehensively evaluate the effects of morin hydrate on the energy metabolism and biological parameters of A. aegypti, with emphasis on survival, development, fertility, and vector competence. Laboratory assays were conducted using larvae exposed to the compound at different concentrations and under variable nutritional conditions. Growth, survival, energy reserves, biochemical and metabolomic profiles were assessed, in addition to infection assays with Mayaro virus and complementary toxicity analyses in non-target organisms. The results showed that morin hydrate induces dose-dependent larval mortality, delays development, and reduces female fertility, even when exposure occurs only at juvenile stages. Significant depletion of lipids, carbohydrates, and proteins was observed, associated with alterations in metabolic pathways and the induction of oxidative stress, establishing a physiological state similar to starvation. This energy imbalance persisted into adulthood, impairing reproduction and decreasing vector competence for Mayaro virus. Moreover, toxicity tests in mice revealed no relevant adverse effects, supporting the selective and environmentally safe potential of the compound. Collectively, the findings demonstrate that morin hydrate acts as a multifunctional metabolic modulator, simultaneously impairing survival, metabolism, development, and reproduction of A. aegypti, representing a promising alternative for the development of sustainable and selective vector control strategies.

7
  • AFONSO SANTINE MAGALHÃES MESQUITA VELEZ
  • Molecular hybridization and dimerization of pharmacophore groups as strategies for designing new drugs to treat infections caused by trypanosomatids

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • LUANA DA SILVA MAGALHÃES FOREZI
  • LUCIANA POLACO COVRE
  • LUIS OCTÁVIO REGASINI
  • MARCO EDILSON FREIRE DE LIMA
  • Data: Nov 28, 2025
    Ata de defesa assinada:


  • Show Abstract
  • Diseases caused by trypanosomatid protozoa significantly impact public health worldwide, and effective long- term treatments are still lacking. Predominantly found in the Americas, Chagas disease (American trypanosomiasis), caused by the hemoflagellated protozoan Trypanosoma cruzi, affects over 7 million people globally. In Africa, sleeping sickness (Human African trypanosomiasis), caused by Trypanosoma brucei, remains a serious health threat because of its high fatality rate if not treated early. Over 55 million people live in endemic zones across Africa, facing real risks of infection. Due to the urgent need for new therapeutic options, this work emphasizes the rational design of novel molecules using two approaches. Chapter 1 details the design of hybrids based on synthetic derivatives of the natural amide piperine, extracted from dried Piper nigrum fruits, combined with pharmacophoric groups found in existing antiparasitic drugs like nitroimidazoles (which contribute to the activity of benznidazole, megazol, and metronidazole). Organic analysis techniques- including those used to investigate intermediates- were employed to synthesize and characterize these hybrids. All molecules were tested against the primary forms of T. cruzi, especially the amastigote stage (strain Tulahuen C2C4- LacZ), and evaluated for activity against T. brucei and cytotoxicity toward different mammalian cells. Molecular docking and enzymatic models of TcSDH and 14 DM of T. cruzi were used to assess the inhibitory potential of these hybrid ligands. In Chapter 2, the rational design of dimeric compounds was explored, inspired solely by the pharmacophoric core of benznidazole (2- 2-nitroimidazole), created through simple N-alkylation using bidentate alkylating agents — a promising strategy. Biological tests showed all dimeric compounds were active against T. cruzi amastigotes (Tulahuen C 2 C 4- LacZ). Notably, longer-chain dimers displayed remarkable potency (IC₅₀ < 1 1.0 µM), indicating that their activity depends on the length of the methylene spacer; longer chains interact more effectively with T. cruzi nitroreductase (TcNTR), which activates these prodrugs inside the parasite. These compounds also demonstrated significant activity against T. b. brucei (strain 427) and exhibited minimal cytotoxicity in mammalian cells, underscoring their selectivity — especially among the longer-chain dimers. The nitroimidazole pharmacophoric groups are crucial in antiparasitic therapy, which, despite limited efficacy, continues to show some success at certain stages of treatment. Overall, this study aims to enhance understanding of their mechanisms of action across different parasites and hosts. It uses multiple approaches to improve the design of new drug candidates and facilitate the development of prototype molecules active against parasitic infections.

8
  • TAMIRES DE ALMEIDA CRUZ
  • Analysis of the Biological Effects of Extracts from the Plant Species Cannabis sativa (Linnaeus) in Models of Protein Aggregation Studies Associated with Neurodegenerative Diseases

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • TUANE CRISTINE RAMOS GONÇALVES VIEIRA
  • ARTHUR EUGEN KUMMERLE
  • CRISTIANO JORGE RIGER
  • DANIELA COSENTINO GOMES
  • ELIS CRISTINA ARAÚJO ELEUTHERIO
  • NEIDE MARA DE MENEZES EPIFANIO
  • RENATA BARBOSA LACERDA
  • Data: Dec 12, 2025


  • Show Abstract
  • Neurodegenerative diseases, in general, are characterized by progressive loss of vulnerable neurons and are related to conformational abnormalities of proteins, such as the formation of oligomers containing the α-synuclein protein in Parkinson's disease (PD) and the β-amyloid peptide in Alzheimer's disease (AD). The plant C. sativa has a diverse chemical profile depending on its genotype, including various classes of substances such as cannabinoids, flavonoids, terpenes, and alkaloids. However, most research addresses the role of phytocannabinoids in isolation. In this study, we evaluated the effects of four C. sativa extracts with different phytocannabinoid chemical profiles in two cellular models that reproduce alterations in cellular homeostasis common during the cellular phase of PD and AD. We used Saccharomyces cerevisiae strains with a deletion in the Yap1p transcription factor and transformed with plasmid DNA expressing aSyn and Aβ42, as well as genetically modified human cells (H4) expressing aSyn. Phytochemical characterization revealed extracts rich in tetrahydrocannabinol – THC (69.88%), cannabidiol – CBD (52.64%), and cannabinol – CBN (47.38% and 58.64%), and we concluded that, regardless of these percentages, all C. sativa extracts showed antioxidant activity independent of the endogenous antioxidant defense system, and reversed the redox imbalance caused by proteins associated with neurodegenerative diseases. However, the extracts were not able to protect against mitochondrial damage caused by aSyn expression, although they protected mitochondria affected by the Aβ42 peptide, suggesting selectivity towards the expressed protein. Furthermore, the extracts reduced the number of intracellular inclusions in H4 cells and increased the number of inclusion-free cells, demonstrating protective biological activity against toxicity caused by aSyn production in H4 cells. C. sativa extracts showed promising effects in modulating aSyn inclusions and in intracellular antioxidant protection, but their role in mitochondrial regulation still needs further investigation.

9
  • LAÍS PETRA MACHADO
  • THEORETICAL DESCRIPTION OF THE OXYGEN RELEASE REACTION IN THE SHEET OF G-C3N4 AND OF G-C3N4 DOPED WITH PHOSPHORUS, PLATINUM AND NIOBIUM

  • Advisor : CLARISSA OLIVEIRA DA SILVA
  • COMMITTEE MEMBERS :
  • CLARISSA OLIVEIRA DA SILVA
  • GLADSON DE SOUZA MACHADO
  • LUCAS MODESTO DA COSTA
  • MARCIO SOARES PEREIRA
  • FELIPE FANTUZZI SOARES
  • LEONARDO BAPTISTA
  • Data: Dec 19, 2025


  • Show Abstract
  • The growing demand for sustainable energy sources drives the development of technologies based on alternative fuels, among which hydrogen stands out as a clean and versatile energy vector. Its production through water electrolysis, however, depends on the efficiency of electrocatalytic reactions, such as the oxygen evolution reaction (OER), which faces high energy barriers. In this context, graphitic carbon nitride (g-C₃N₄) emerges as a promising material due to its two-dimensional structure, thermal stability, and abundance of active sites, although its intrinsic catalytic activity remains limited.

    This work investigates, through computational modeling based on Density Functional Theory (DFT), the behavior of the OER on surfaces of pristine g-C₃N₄ and functionalized with different dopant elements: platinum (Pt), phosphourus (P) and niobium (Nb). Optimized geometries, adsorption energies of the main reaction intermediates (OH*, O*, OOH*, and OO*), and Gibbs free energy (ΔG) profiles for the key steps of the OER under various electrochemical potential conditions were analyzed. The objective was to assess how these structural and electronic modifications influence the stability of the intermediates and the thermodynamic feasibility of the reaction.

    The results showed that Pt doping significantly reduced the OER overpotential to 0.67 V, rendering all steps exergonic from 1.90 V onward, thus standing out as the most efficient system among those studied. Nb doping, on the other hand, enhanced the interaction with oxygenated intermediates (especially O*), promoting strong anchoring and localized structural stability, but requiring a higher potential (2.60 V) to complete the catalytic cycle. Pure g-C₃N₄, although structurally stable, exhibited inferior performance with an overpotential of 1.14 V. These findings reinforce the importance of doping in g-C₃N₄ for the development of more active catalysts for oxygen evolution

2024
Dissertations
1
  • FELIPE PIRES MACHADO
  • Synthesis, Characterization and In Silico and In Vitro Evaluation of the Anti-leukemia Effect of Tetra-substituted Pyrazoles on Jurkat Cells

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • FELIPE VITORIO RIBEIRO
  • ROSANE NORA CASTRO
  • Data: Jan 25, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Pyrazoles are five-membered aromatic heterocyclic compounds of which three are carbon atoms and the other two are nitrogen atoms that, by convention, assume positions 1 and 2 of the ring. Given its wide spectrum of biological activities reported in the literature, such as analgesic and anti-inflammatory, bactericidal, fungicidal, antiviral, antitumor and others, this class of heterocyclic compounds has aroused the interest of chemical and pharmaceutical industries that continually search for new substances that are potentially more effective in combating diseases and, at the same time, have lower toxicity. Cancer is a disease that is the second cause of death in Brazil and worldwide. Leukemias are a group of malignant neoplasms whose main characteristic is the uncontrolled proliferation of immature hematopoietic progenitor cells. Once produced, these cells accumulate in the bone marrow (BM), causing a series of damages and compromising their normal functions. In this context, using three previously synthesized nitriled precursors (47-49) and four different nucleophiles, this work aimed to prepare a family of ten pyrazoles (53-62), two of which are new (56 and 59). Spectroscopic techniques such as infrared, hydrogen and carbon-13 nuclear magnetic resonance were used to confirm the proposed structures. Once confirmed, the ten structures were subjected to in silico tests using the LCL-Pred and AdmetSAR software in order to carry out screening for subsequent biological evaluation of these compounds. Thus, based on the data generated in this analysis, it was possible to suggest that compounds 53 and 60 would be those most likely to have antitumor activity and at the same time likely to present low toxicity levels. Once selected, these two pyrazoles were subjected to toxicity analyzes using the Artemia salina method and their effects on the viability of Jurkat cancer cells. These studies showed that both had effects on the inhibition of cell viability, with compound 60 being more active. Given the structural similarity between these compounds, with the substituent linked to the pyrazole ring in position 4 being the only difference, it was possible to suggest that the nitrile group plays an important role in this mechanism of action on the cancer cells evaluated.

2
  • MAYARA CARLA DOS SANTOS
  • NEW ACYLGUANIDINE QUINOLINES DESIGNED AS SELECTIVE BUTYRYLCHOLINESTERASE INHIBITORS
  • Advisor : RENATA BARBOSA LACERDA
  • COMMITTEE MEMBERS :
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • LUCIANO RAMOS SUZART
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • Data: Apr 26, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Alzheimer's disease (AD) is a progressive neurodegenerative disease characterized by a deficiency of intact cholinergic neurons. Butyrylcholinesterase (BuChE) and acetylcholinesterase (AChE) are nervous system enzymes that catalyze the hydrolysis of acetylcholine (ACh), reducing neurotransmitter levels and ending communication between nerve cells. AChE is still the main therapeutic target for the treatment of AD, however studies suggest an important role for BuChE in the hydrolysis of ACh in more advanced stages of AD, with selective BuChE inhibitors being seen as potential candidates for the treatment of this disease. This work describes a new series of quinolinic acylguanidines (59-62A-D; 63-66A-D) designed as selective inhibitors of BuChE. Structural design was based on the indole and bromopyrrolic acylguanidines previously described by our group, which were shown to be selective inhibitors of BuChE. In the new derivatives, the acylguanidine pharmacophore was maintained and, through bioisosterism, we propose the exchange of the main heterocycle for the quinoline nucleus with different substitution patterns in position two of the central heterocycle. The synthesis of the compounds was based on obtaining the key intermediates tert-butyl((methylthio)(quinoline-4-carboxamido) methylene) carbamates (58a-d) for subsequent condensation with the amines of interest (A-D) and subsequent reaction in an acidic medium to remove the protecting group ( N-Boc). 20 original compounds were synthesized, including protected (59-62-A-D) and free acylguanidines (63-66-A-D), characterized by H1NMR and DEPTQ. The free phenyl-quinoline acylguanidines (64A-D) were identified as selective inhibitors of the BuChE enzyme (IC50 between 7 and 12 µM). The two acylguanidines with the lowest IC50 values for BuChE inhibition (64C-D) were evaluated for their antioxidant profile in the DPPH model, but showed no activity at tested concentration (110µM). Molecular docking studies made it possible to understand the possible modes of interaction of active compounds with BuChE and in silico prediction of ADME and druglike properties suggests that the new quinolinic acylguanidines have a good pharmacokinetic profile.

3
  • MATHEUS SILVA CAIADO
  • Morin effects on Aedes aegypti lipid metabolism and its effects on reproductive physiology.

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • JOSÉ ROBERTO DA SILVA
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • EMERSON GUEDES PONTES
  • Petter Franco Entringer
  • RENATA BARBOSA LACERDA
  • Data: Apr 30, 2024
    Ata de defesa assinada:


  • Show Abstract
  • The use of plant-derived allelochemicals has emerged as a promising alternative for insect
    control, owing to their non-toxicity to humans and the environment. Morin, a flavonoid
    primarily extracted from plants of the Moraceae family, has exhibited a wide range of
    applications in model organisms. This compound has demonstrated efficacy in inhibiting fatty
    acid synthase and ecdysone 20-monooxygenase, enzymes crucial for the insect life cycle. Fatty
    acid synthase plays a fundamental role in lipid metabolism, synthesizing long-chain fatty acids
    from Malonyl-CoA molecules and forming complex lipids such as triacylglycerols (TAGs). In
    insects, this lipid synthesis is critical in various life cycle events including reproduction, flight,
    and development. In this study, we investigated the effects of morin ingestion in
    Aedes aegypti,
    the primary vector of several arboviruses, including those causing Dengue, Zika, Chikungunya,
    and Yellow Fever. For this purpose, a feeding approach was employed, with mosquitoes being
    fed and separated at 24-, 48-, 72-, and 96-hours post-emergence. Additionally, females and
    males were kept in separate cages throughout the assay. Through this, it was possible to assess
    the TAG content of the whole body and fat body of the insects, along with the relative
    expression levels of fatty acid synthase (
    fas1) and triacylglycerol lipase (tagl1). This approach
    revealed that the effects of feeding varied according to the sex and age of the mosquitoes. While
    females did not show a reduction in lipid content in the fat body after morin ingestion, males
    exhibited lower levels of triacylglycerols. Therefore, we investigated the effects of morin-fed
    males on copulation, finding that females mated with treated males laid fewer eggs and had a
    reduced hatching rate. In summary, our findings indicate that morin feeding was more effective
    in males than in the pre-vitellogenic period of females. The results related to fecundity and
    fertility highlight morin as a promising molecule for studies on insect control of interest, both
    in public health and agro-economic contexts.


4
  • LUIZ HENRIQUE DE CARVALHO OLIVETO
  • DESIGN, SYNTHESIS, AND EVALUATION OF THE ANTI-TRYPANOSOMA CRUZI ACTIVITY OF NEW MOLECULAR HYBRIDS OF PIPERINE AND NITAZOXANIDE

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • DANIELLE DE OLIVEIRA NASCIMENTO
  • EDSON FERREIRA DA SILVA
  • EDUARDO HILLMANN WANDERLIND
  • GUSTAVO HENRIQUE GOULART TROSSINI
  • MARCO EDILSON FREIRE DE LIMA
  • Data: Jun 27, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Chagas disease (CD) is a neglected tropical disease (NTD) caused by the hemoflagellate protozoan Trypanosoma cruzi. CD has various modes of transmission, with the primary one being vectorial, through the bite of insects from the Reduviidae family (subfamily Triatominae). However, transmission can also occur vertically from mother to child, through the placenta or breastfeeding, by blood transfusion, laboratory accidents, or orally, also known as distant transmission, through consuming raw food containing contaminated insects. T. cruzihas has a complex life cycle, presenting three distinct evolutive forms (epimastigote, amastigote, and trypomastigote). The progression of the infection is divided into three phases: acute, indeterminate, and chronic. In the chronic phase, damage occurs mainly to the digestive tract and the cardiac system in approximately 30% of infected patients. Recent literature data have revealed a new form of amastigote, the dormant amastigote, which lodges in cells of deep and poorly vascularized tissues, forming nests and being capable of restarting the disease cycle at any time. It is estimated that the disease affects 6 to 8 million people worldwide and causes approximately 50,000 deaths. There are only two drugs used in the treatment of Chagas disease patients: nitroimidazole, benznidazole, and the nitrofuran derivative, nifurtimox. Due to genotoxic effects, the use of nifurtimox has been discontinued in Brazil, leaving only benznidazole as a therapeutic alternative for the chemotherapy of Chagas disease. These drugs do not show effective activity in the chronic phase of the infection, highlighting the need to develop new therapeutic alternatives for chronic Chagas disease patients. The amide piperine is a natural product that shows good in vitro activity against T. cruzi. This amide can be isolated in yields ranging from 3 to 10% from the dried fruits of Piper nigrum (black pepper). The chemical structure of piperine is divided into three main subunits: a trisubstituted aromatic ring, a conjugated diene spacer with four carbons, and a piperidinyl amide fraction. Different approaches have been employed better to understand piperine's structure-activity relationship (SAR), leading to the preparation of different families of derivatives of this essential natural amide. In this work, we propose using the molecular hybridization strategy of piperine with the nitro-thiazole nucleus, a pharmacophore present in the structure of the antiparasitic drug nitazoxanide (Annita®). Literature data demonstrate that nitro-heterocycles interfere with the redox balance of the parasite cell, which, being more sensitive to the presence of radical oxygen and nitrogen species, is more affected by them than mammalian cells. Thus, the planned compounds have great potential to present selective toxicity against parasite cells. Auspicious preliminary results obtained in vitro against amastigotes of T. cruzi (strain Tulahuen LaCZ, C2C3) of a piperine-nitazoxanide hybrid synthesized in this work validate the proposed molecular design strategy. The hybrids were prepared in yields ranging from 24 to 47% through a coupling reaction between carboxylic acids and amides in the presence of HATU. The tests in T. cruzi showed positive results, highlighting the main hybrid, LOP-04, which presented an IC50 result in the range of 2 mM. Two other compounds, ME-04 and ME-05, also showed good selectivity indices, 18.40 and 17.58, respectively. The data set allowed us to understand and outline an SAR study to analyze which portions of the molecules contributed to the antitrypanosomal activity. The results obtained herein demonstrate that this work successfully achieved the proposed objectives.

5
  • JORGE LUCAS FERREIRA LACERDA
  • DEVELOPMENT AND INVESTIGATION OF THE ANTI-TRYPANOSOMA CRUZI ACTIVITY OF NEW CURCUMINOIDS

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • PEDRO DE SENA MURTEIRA PINHEIRO
  • LEONARDO SIMOES DE ABREU CARNEIRO
  • MARCO EDILSON FREIRE DE LIMA
  • NAILTON MONTEIRO DO NASCIMENTO JÚNIOR
  • RENATA BARBOSA LACERDA
  • Data: Jul 29, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Curcumin (1) is a natural product of the diarylheptanoid class, being the majority component of the Curcuma longa, which presents a wide variety of applications in medicinal
    chemistry since antitumor activity, until anti-inflammatory, antioxidant, antiparasitic, among
    others that classify it as a multitarget substance. Despite a variety of works in the literature
    relating the activity of curcumin (1) against Leshimania amazonensis and Plasmodium
    falciparum, there are few reports from studies about its activities against Trypanosoma
    cruzi, the etiological agent by Chagas Disease (CD). CD affects approximately 8 million
    people worldwide, with only two drugs, benznidazole (7) and nifurtimox (8), available to
    treat the patients. Both drugs present low efficacy for long-term treatment and much
    systemic toxicity, with collateral severe effects, and only benznidazole is now available in
    Brazil. In previous work, the LaQuiMed group was one of the pioneers in researching the
    activity of curcumin (1) against T. cruzi (Dm-28c strains), obtaining IC50 values in vitro of
    10,13 μM against epimastigotes forms and investigating the interactions with tubulin, by in
    silico methods, as its possible molecular target. Thereby, this work's objective is to
    synthesize a series of products planned by medicinal chemistry strategies of non-classic
    bioisosterism (33 - 41), like natural curcuminoids (1 - 3) analogs, and molecular
    hybridization as hybrids (54 - 56) with nitroimidazoles portions, aiming to enhance the
    curcuminoids biological activity against parasite amastigotes forms (intracellular replicative
    form), following the in silico investigation of the interactions of the product with its potential
    molecular target and pharmacokinetic profile (ADME) to reduce cytotoxic effects
    to the host and justify the products selectivity. From that, it was possible to obtain a hit
    (compound 33) among ten synthetic derivatives (33 - 41, 55) obtained at this work. The set
    of derivatives was tested against mammalian cells (LLC-MK2), which was the host cell
    used in the infection protocol. Compound 33 was the most promising one with IC50 of
    17,20 ± 4,37 μM against T. cruzi (Tulahuen C2C4 LacZ strain) amastigotes in vitro and
    IC50 > 200 μM against host cells, then expressing 11,63 of selectivity index (SI), which is
    ten times higher than that observed for curcumin (1) and other natural diarylheptanoids (2
    and 3). The in silico studies were accomplished to analyze the product interactions with
    tubulin (curcuminoids possible molecular target) of T. cruzi by comparative modeling and
    used to investigate the possible action mechanism of products by molecular docking in
    tubulin, presenting a good correlation of score results and experimental results (R = -0,76),
    being able to demonstrate the mitotic catastrophe process in the parasite caused by the
    product's presence. Furthermore, the product's cytotoxicity has been evaluated by
    theoretical methods from ADME analysis and by the capacity to suffer Michael's reactions
    at the biological environment to justify its interaction with undesirable molecular targets
    that could elevate their respective cytotoxicity. These analyses can justify the biological
    actions and the selectivity of the hit (33) against the parasite, highlighting it as the primary
    hit in this work.

6
  • BRUNA CAROLINE ESTEVES DE SOUZA
  • DESIGN, SYNTHESIS AND PHARMACOLOGICAL EVALUATION OF MANNICH BASES DERIVED FROM LAUSONE: POTENTIAL ANTIMALARIAL AND ANTICHOLINESTERATIC AGENTS

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • DANIEL PAIS PIRES VIEIRA
  • LUCIANO RAMOS SUZART
  • MARINA AMARAL ALVES
  • Data: Sep 17, 2024
    Ata de defesa assinada:


  • Show Abstract
  • The naphthoquinone lawsone, an orange dye extracted from the leaves of the henna plant, is widely used for coloring hair and skin. It also plays a significant role in organic synthesis, particularly in the multicomponent Mannich reaction with amines and aldehydes, yielding compounds known as Mannich bases. These compounds are noteworthy for their structural diversity and diverse biological activities, including the inhibition of the enzyme acetylcholinesterase, which is relevant in the treatment of Alzheimer's disease. Alzheimer's disease is characterized by disruptions in neuronal communication with synapses, leading to impaired memory and cognitive function. Additionally, Mannich bases exhibit antiparasitic activity, particularly against malaria, a parasitic disease caused by protozoa of the genus Plasmodium and transmitted by Anopheles mosquitoes.
    Although established treatments exist for both malaria and Alzheimer's disease, these treatments are often associated with side effects and, in the case of malaria, with issues related to drug resistance. Consequently, there is a persistent need for new therapeutic alternatives. This research aims to contribute to the discovery of new compounds with therapeutic potential for these diseases. Sixteen new Mannich bases derived from lawsone were synthesized, with potential for cholinesterase inhibition and antimalarial activity. The structural design was
    guided by two main strategies: bioisosterism and homologation, inspired by the drugs donepezil, a cholinesterase inhibitor, and atovaquone, an antimalarial agent.
    The synthesis was carried out using the multicomponent Mannich reaction with lawsone, three aldehydes (formaldehyde, acetaldehyde, and benzaldehyde), and eight different amines. The reactions were performed following the principles of green chemistry, with purification achieved through recrystallization, resulting in final yields ranging from 30% to 90%. To enhance solubility, the Mannich bases were converted into hydrochlorides, with high
    purity confirmed by High-Performance Liquid Chromatography (HPLC). The structures were elucidated using Mass Spectrometry and Nuclear Magnetic Resonance (NMR) spectroscopy of Hydrogen (¹H) and Carbon (¹³C).
    The hydrochlorides were evaluated for their enzyme inhibition percentages against acetylcholinesterase (AChE) and butyrylcholinesterase (BChE). Among them,
    LaDMol377 hydrochloride demonstrated a promising inhibition profile against AChE, encouraging further enzymatic studies. The antimalarial activity of the hydrochlorides is currently under evaluation, with results eagerly anticipated

7
  • GABRIEL FULGENCIO DOS SANTOS
  • Ent-kaurene diterpenoids isolated from stingless bee mandaçaia 
    geopropolis and antifungal potential (Melipona quadrifasciata anthidioides) 
  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ROSANE NORA CASTRO
  • LUCIANO RAMOS SUZART
  • ALESSANDRA LEDA VALVERDE
  • Data: Oct 7, 2024
    Ata de defesa assinada:


  • Show Abstract
  • In Brazil there are a variety of species of stingless bees (meliponines), belonging to the Apidade family. The bee Melipona quadrifasciata anthidioides, object of study in this work, is capable of producing geopropolis, a resinous substance with a complex matrix, consisting of a mixture of clay with plant exudates. Several biological activities of geopropolis have been evaluated, such as antibacterial, antifungal, antiviral and antioxidante. Sporotrichosis is an infection caused by the fungus of the genus Sporothrix, being a zoonosis, which in Brazil is endemic and transmitted by the fungus Sporothrix brasilliensis. Treatment options, such as Itraconazole, have been hampered by the emergence of new fungal isolates with drug resistance. Therefore, the search for new substances that can be used in the treatment of sporotrichosis is of scientific interest. This work aimed to evaluate the chemical profile, the content of phenolics and total flavonoids, the antioxidant capacity, isolate and characterize substances from mandaçaia geopropolis (Melipona quadrifasciata anthidioides), in addition to investigating the in vitro antifungal activity against clinical isolates of S. brasiliensis. The geopropolis was collected in Bosque da Barra, Rio de Janeiro, and the ethanolic extract of mandaçaia geopropolis (EEGP-M) was prepared in an ultrasonic bath for two hours. Subsequently, the ethanolic extract was solubilized in methanol: water (7:3 v/v) and partitioned with hexane and dichloromethane, respectively, generating the fractions: Fr. Hex, Fr. DCM and Fr. MeOH:H2O. Fr. Hex was subjected to open column chromatography on silica gel, where two diterpenes with an ent-kaurene skeleton were isolated, the diterpene kaurenoic acid, and a cinnamic acid derivative, kaur-16-en-19-oic acid, 15-[(1-oxo-3-phenyl-2-propen-1-yl) oxy], furthermore, another diterpene, ent-caurenal, was characterized as an enriched fraction. Total phenolic and flavonoid content was evaluated in comparison to gallic acid (GA) and quercetin (QE) standards, respectively. Fr. DCM obtained the best results, with 1.89 mg EAG/100mg in phenolics and 0.42 EQE/100mg in flavonoids. The DPPH assay was used to determine the antioxidant capacity of the extract and its fractions, again the Fr. DCM fraction showed the best result (EC50 = 200 µg/mL), corroborating the results of total phenols and flavonoids. Antifungal activity was investigated against clinical strains of S. brasiliensis.  The best result was observed for the isolated cinnamic acid derivative (MIC = 0.469 mM), however kaurenoic acid (MIC = 1.875 mM) and the fraction enriched with ent-kaurenal aldehyde (0.187 mg/mL) also showed good results; among the ethanolic extract and its fractions, Fr. Hex showed the best antifungal response (MIC= 0.281 mg/mL). The antifungal activity test demonstrated the inhibition potential of the ethanolic extract, its fractions and substances isolated from mandaçaia geopropolis against S. brasilliensis, signaling that this natural product is promising for the treatment of sporotrichosis

Thesis
1
  • DANIEL ANANIAS REIS DE CAMPOS
  • DEVELOPMENT OF NANOSTRUCTURED ELECTROCHEMICAL BIOSENSOR USING GHERKIN EXTRACT PEROXIDASE (Cucumis anguria L.) FOR DOPAMINE DETERMINATION

  • Advisor : JOAO VICTOR NICOLINI
  • COMMITTEE MEMBERS :
  • JOAO VICTOR NICOLINI
  • IDIO ALVES DE SOUSA FILHO
  • ELIANE PEREIRA CIPOLATTI
  • TITO LÍVIO MOITINHO ALVES
  • ANDREA MEDEIROS SALGADO
  • Data: Mar 5, 2024
    Ata de defesa assinada:


  • Show Abstract
  •  

     Biosensors stand out as one of the greatest scientific advances in recent decades, as they enable rapid testing for numerous analytes, whether crucial for clinical diagnostics or in determining environmental contaminants. Peroxidase is one of the most widely used enzymes in amperometric biosensor research. Therefore, it is increasingly important to advance our knowledge of the applications of this enzyme and explore alternative sources to commercial peroxidase (HRP) from Armoracia rusticana. In this study, plants were investigated as sources of peroxidase, with the extract from gherkin (Cucumis anguria) exhibiting the highest activity. It was selected and used as the source of this enzyme for immobilization on titanate nanotubes (NTT) and iron oxide magnetic nanoparticles (NPM) for the development of modified carbon paste biosensors (NTTP and NPMP). In the second part of the thesis, other biosensors were prepared using filtered and concentrated gherkin extract (NTTP-F and NTTP-R) and one with commercial peroxidase (NTT-HRP). The constructed biosensors were employed in the quantification of dopamine in a pharmaceutical product (5.00 mg mL-1) using square wave voltammetry (SWV). The application of a potential of -0.30 V for 5 s was necessary before each SWV scan to promote the desorption of the analyte from the biosensor surface. Parameters such as pH, amplitude, and frequency were optimized. For the NTTP biosensor, the obtained calibration curve ranged from 4.98 to 65.4 μmol L-1, with a detection limit (LD) of 2.46 μmol L-1. The NPMP biosensor calibration curve ranged from 4.98 to 61.0 μmol L-1, with an LD of 2.11 μmol L-1. In the determination of dopamine in the commercial ampoule, the NTTP biosensor presented a confidence interval of 5.04 ± 0.06 mg mL-1 (RE = +1.2%), and the NPMP biosensor showed 4.76 ± 0.04 mg mL-1 (RE = -4.8%). The NTT biosensor demonstrated superior results compared to the NPM biosensor in terms of a higher signal, better repeatability, a slightly broader calibration curve, and greater accuracy in the standard addition experiment. NTTP-R, NTTP-F, and NTT-HRP biosensors exhibited the same linear range of the calibration curve (4.98 to 56.6 μmol L-1), with LDs of 1.20, 1.04, and 1.83 μmol L-1, respectively. In the determination of dopamine in the commercial ampoule, NTTP-F presented a confidence interval of 5.47 ± 0.09 mg mL-1 (RE = +10%), NTTP-R showed 5.0 ± 0.2 mg mL-1 (RE = 0%), and NTT-HRP displayed 5.0 ± 0.4 mg mL-1 (RE = 0%). In the interference test with 10 g L-1 urea, the NTTP-R biosensor exhibited the least signal loss. Finally, the NTTs displayed better electrochemical characteristics than the NPMs. Despite being quite similar, the NTTP-R biosensor yielded better results than NTTP-F and the NTT-HRP biosensor. Biosensors constructed with gherkin extract did not show significant differences from the biosensor constructed with HRP. However, the NTTP-R biosensor exhibited better characteristics than both the NTT-HRP and the NTTP-F.
2
  • THIAGO MOREIRA PEREIRA
  • Design and synthesis of trisubstituted 1,2,4-triazoles: structural exploration in the inhibition of GSK-3β for the treatment of Alzheimer’s disease

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • MARTINE SCHMITT
  • ARTHUR EUGEN KUMMERLE
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • JOÃO PAULO DOS SANTOS FERNANDES
  • LEANDRO SOTER DE MARIZ E MIRANDA
  • MARINA AMARAL ALVES
  • VAGNER DANTAS PINHO
  • Data: Jun 7, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Currently 55 million people live with dementia worldwide with nearly 10 million new cases every year. Dementia results from a variety of diseases that affect the brain, and its most common form is the Alzheimer’s disease (AD). AD is driven by multiple deleterious factors, among them, the presence of insoluble filaments and protein aggregates. The inhibition of GSK-3β, a kinase involved in many of these deleterious factors, have shown promising results in vivo, emerging as a promising potentially disease-modifying therapeutic class for AD. So, in this work, we designed three series of 1,2,4-triazoles as GSK-3β inhibitors. The synthetic routes to obtain the designed compounds were sucessfully developed. The compounds were tested in vitro against GSK-3β and the results are promissing, with the discover of a hit compound. In addition, the series with best profile was used in the design and synthesis of a new series of GSK-3β degraders (PROTACs).
    In parallel to the pharmacological work, we developed the synthesis procedure and molecular diversity exploration of the 1,2,4-triazole nucleus through metal-catalyzed cross-coupling reactions, in addition to a copper-catalyzed cyanation reaction using a non-toxic cyanide source in aqueous medium.

3
  • LUCAS DE OLIVEIRA PIRES
  • Planning, Synthesis and Evaluation of Biological Properties of Cinnamic Amides and its Prenylated Derivatives
  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ELISIÁRIO JOSÉ TAVARES DA SILVA
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • EDUARDO HILLMANN WANDERLIND
  • NAILTON MONTEIRO DO NASCIMENTO JÚNIOR
  • ROSANE NORA CASTRO
  • Data: Oct 21, 2024
    Ata de defesa assinada:


  • Show Abstract
  • A great diversity of cinnamic acids and its derivatives are naturally found as a product from the special metabolism of plants, and several biological properties are described in the literature and can be associated to the presence of these derivatives and several natural products. The aim of this work is to describe the planning, synthesis and biological evaluation of cinnamic acid amides against different biological targets with clinical relevance. Series I and II are composed by amides derived from caffeic acid and their respective O-prenylated analogues, planned as potential COX-2 inhibitors and evaluated against breast cancer cells for antiproliferative activity. Series III and IV are composed by anilides prepared using different cinnamic acids, used to obtain their respective lactamas. Series I – IV were then evaluated against T. cruzi for antiparasitic activity and S. brasiliensis for antifungal activity, as well as cytotoxicity evaluated using LLC-MK2 cells. Among the tested compounds, it is possible to highlight the derivative 3d (caffeic acid hexylamide) due to its inhibition of COX-2 activity (IC50 = 6,3 µM) and antiproliferative activity (IC50 = 62,91 µM), as well as the activity against amastigotes of T. cruzi (IC50 = 27,26 µM) and growth inhibition of S. brasiliensis (CIM = 1,25 µM), with moderate cytotoxic (IC50 = 156,10 µM). Among the different biological evaluations, the O-prenylated analogues from Series II were more active and their respective amide from Series I only for antiparasitic activity, in which the derivatives 3cP (caffeic acid pentylamide O-prenylated) and 3dP (caffeic acid hexylamide O-prenylated) showed the best results against T. cruzi amastigotes (IC50 = 7,54 e 13,28 µM, respectively), while the O-prenylation of amides didn’t modulate the biological aspect of the structure in a positive way in comparison to the compounds from Series I. The compounds from Series III and IV of anilides and their respective lactamas didn’t show biological activity against T. cruzi or S. brasiliensis. The studied compounds from this work showed the potential of cinnamic acid derivatives against different targets, and the O-prenylation reaction can be considered as an important tool in the investigation of new compounds with promising antiparasitic activity

4
  • MARINA BRANDÃO DA FONSECA
  • MULTICOMPONENT REACTIONS AS A SYNTHETIC STRATEGY FOR THE OBTENTION OF BIOACTIVE HETEROCYCLES.

  • Advisor : CEDRIC STEPHAN GRAEBIN
  • COMMITTEE MEMBERS :
  • SABRINA BAPTISTA FERREIRA
  • CEDRIC STEPHAN GRAEBIN
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • EDUARDO HILLMANN WANDERLIND
  • ROBERTA KATLEN FUSCO MARRA
  • Data: Nov 14, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Multicomponent Reactions (MCRs) are a set of chemical reactions that have as a general concept the synthesis of a single final product with a high degree of chemical diversity from three or more reagents. Various multicomponent reactions are known, with the main ones being the Hantzsch reaction and the Biginelli reaction. The Hantzsch reaction was originally developed for the synthesis of dihydropyridines; however, after modifications, it has also been used for the synthesis of acridinones. The Biginelli reaction originally describes the synthesis of dihydropyrimidinones, but with a change in reagents, it can also be carried out for the synthesis of quinazolinones. This work demonstrates the use of both multicomponent reactions for the synthesis of a diverse range of heterocycles. A total of 17 acridinones and 7 acridinediones were synthesized through a modified methodology of the Hantzsch reaction. Various reagents were used, demonstrating the versatility of the reaction, yielding 8 novel molecules in the literature. The Biginelli reaction was employed in the synthesis of 11 quinazolinones, with two being novel, and 4 xanthenediones, confirmed as byproducts of the Biginelli reaction. Various reagents were used, showcasing how this reaction can be utilized as a tool in the synthesis of heterocycles. Fifteen acridones were evaluated against targets related to Alzheimer’s disease (cholinesterases and antioxidant activity). The molecules mostly demonstrated inhibitory activity against acetylcholinesterase and butyrylcholinesterase, as well as antioxidant properties, while the permeability across the blood-brain barrier was satisfactory for 8 acridones. The quinazolinones were evaluated for their cytotoxic potential and trypanocide activity. The results indicate promising trypanocide activity for molecules containing the 4-bromophenyl group, while the cytotoxic activity was not satisfactory. Seven acridinediones and two acridinones were evaluated using in silico methods for their potential interactions with tubulin; the results allowed for mapping the interactions that occur when using lawsone as a reagent in the reaction, in addition to demonstrating the modification of positioning at the colchicine site when increasing the size of the acridones. Nevertheless, the overall results appear promising from the perspective of exploratory chemistry, with 39 molecules synthesized through multicomponent reactions. The use of multicomponent reactions has proven to be a fast, effective, and versatile method as a synthesis strategy for new bioactive molecules, contributing to future research.

5
  • GABRIEL FREITAS DO RIO
  • EVALUATION OF THE INTERACTION BETWEEN NEW TRYPANOCIDE 1,2,4--TRIAZOLE-3-THIONES WITH HUMAN SERUM ALBUMIN

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • NELILMA CORREIA ROMEIRO
  • RODRIGO JOSÉ CORREA
  • ROSANE NORA CASTRO
  • Data: Dec 10, 2024
    Ata de defesa assinada:


  • Show Abstract
  • There is a strong demand for the development of new drugs for the treatment of Chagas disease, a neglected tropical disease. This work investigates the interaction of human serum albumin (HSA) with a novel series of piperine-derived 1,2,4-triazole-3-thiones (19b, 19c, 19d and 19e), which have been shown by our group to exhibit trypanocidal activity in the low micromolar range. The study was performed by spectroscopic techniques, including UV-vis absorption, circular dichroism, steady-state and time-resolved fluorescence combined with theoretical calculations (molecular docking). The interaction of all compounds was spontaneous (ΔG◦ < 0) and strong (Ka ≈ 105 M-1), resulting in an unconventional ground-state association (there is a combination of static and dynamic quenching mechanisms). The positive ΔH◦ and ΔS◦ values are indicative that the interaction between the compounds and HSA is entropically driven and suggest that it is predominantly governed by hydrophobic interactions. Interestingly, the competitive interaction results show that the compounds containing a cyclohexyl substituent at N4 (19c and 19e) bind preferentially to Sudlow site I, while the compounds containing a phenylethyl substituent at N4 (19b and 19d) bind preferentially to Sudlow site II. The docking results indicate that the interaction profiles of 19c and 19e with Sudlow site I are quite similar, as are those of 19b and 19d with Sudlow site II. In all cases, the interactions evidenced by the theoretical method are predominantly hydrophobic, in agreement with the thermodynamic data. Favorable interaction profiles with HSA should have a positive effect on the pharmacokinetics of piperine-derived trypanocidal compounds and probably a major influence on their in vivo efficacy.

6
  • DEBORA BAPTISTA PEREIRA
  • CHEMICAL CHARACTERIZATION OF GREEN PROPOLIS AND DEVELOPMENT OF ORODISPERSIBLE FILM WITH 
    ANTIVIRAL ACTION AGAINST SARS-COV-2.
  • Advisor : DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • COMMITTEE MEMBERS :
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • CRISTIANO JORGE RIGER
  • ANDRE MARQUES DOS SANTOS
  • RENATA NUNES OLIVEIRA
  • CRISTIANE AGUIAR DA COSTA
  • FERNANDA DAS NEVES COSTA
  • LUCIANA MOREIRA CHEDIER
  • Data: Dec 17, 2024
    Ata de defesa assinada:


  • Show Abstract
  • Green propolis has proven pharmacological properties, such as antivirais, anti-inflammatory and antioxidant action. In view of the SARS-CoV-2 pandemic, its use has gained prominence as a potential therapeutic approach, especially with innovative forms such as orodispersible films. The present study aimed to investigate the chemical composition of Brazilian green propolis, evaluate its antiviral activity against SARS-CoV-2 in vitro and develop an orodispersible film from this extract. 

    Ultrasound-assisted extraction, maceration and percolation methods followed by identification by high-performance liquid chromatography with a diode array detector (HPLC-DAD), quantification of total phenolics, total flavonoids and antioxidant activity were also analyzed. The interaction of the bioactive compounds present in the extracts with the SARS-CoV-2 Spike RBD protein and the ACE2 receptor and proteases PLpro and 3CLpro, as well as cytotoxicity assays, were also analyzed. Finally, the formulation of an orodispersive film was performed, where the characterization was performed through analyses of weight uniformity, swelling capacity, Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy (SEM), x-ray diffraction (XRD) and gravimetric analysis (TGA). 

    The results showed that the green propolis extracts presented a significant inhibitory activity against the viral enzymes PLpro (64.96% - 93.16%), 3CLpro (0 - 76.79%) and Spike protein (26.42% - 96.41%), indicating its potential as an antiviral agent. These results were related to the compounds identified in the green propolis extracts (Chlorogenic, Caffeic, p-Coumaric, Ferulic, Rosmarinic Acids, Kaempferol, Kaempferide, Artepellina C, Drupamine, Baccharin, Chromene, Pinobanksin). The optimization of the ultrasound extraction methods resulted in high levels of phenolic compounds (76.34% - 75.96%) and flavonoids (29.81% - 27.80%), correlated with the antioxidant capacity of the extracts: DPPH (IC50 4.08 - 4.15) and FRAP (1492.14% - 1450.31%). The orodispersible films developed demonstrated good uniformity and swelling capacity for controlled release of bioactive compounds, suggesting a new form of administration for antiviral treatments. The FTIR, SEM and DRX characterizations 

    indicated interaction between the polymer and the extract components, however without the formation of new bonds and with uniformity on the surface. In the TGA it was possible to observe small changes in thermal stability attributed to the presence of the extracts. 

    This study highlights the relevance of green propolis as a promising source of compounds with antiviral activity against SARS-CoV-2, in addition to presenting a new pharmaceutical formulation that can be explored in future research. The combination of optimized extraction methods and the development of orodispersible films opens new possibilities for the use of natural products in antiviral therapy. 

2023
Dissertations
1
  • THIAGO DE SOUZA DIAS SILVA
  • Design, synthesis and anti-Trypanosoma cruzi evaluation of naphthoimidazole hybrids, derived from β-lapachone, with nitroimidazoles

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • DEBORA DECOTE RICARDO DE LIMA
  • LUCIA HELENA PINTO DA SILVA
  • MARCO EDILSON FREIRE DE LIMA
  • NELILMA CORREIA ROMEIRO
  • OTAVIO AUGUSTO CHAVES
  • Data: May 15, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Chagas disease (CD) is an infection caused by the protozoan Trypanosoma cruzi. It is classified by the World Health Organization as one of the most neglected tropical diseases in the world, and approximately 6 to 7 million people worldwide are believed to be infected with T. cruzi. In addition, it is estimated that less than 1% of patients with CD receive antiparasitic treatment, which is performed using two nitroheterocyclic drugs introduced more than half a century ago, benznidazole and nifurtimox. Both drugs are effective when administered in the acute phase of CD and do not show significant activity in the chronic phase. However, these two drugs have adverse effects and can be long-term treatments. Since it is a disease that primarily affects populations living in pockets of poverty, there is no interest on the part of large pharmaceutical companies in developing research seeking to find drugs with greater efficacy and less toxicity. In other words, there is humanitarian demand, but there is no market. The use of natural products (NPs), especially those of plant origin, is of great importance and contributes to the discovery and development of new drugs. Faced with the diversity observed in NPs, one class of substances stands out: quinones. Lapachol and β-lapachone are two naphthoquinones widely reported in the literature and have attracted great attention in research on quinone chemistry and pharmacology. Lapachol is found as a constituent of several plants, and its occurrence is higher in the Bignoniaceae family, particularly in the genus Tabebuia. In Brazil, Tabebuia species are popularly known as ipê or pau d'arco. β-lapachone can be treated by isomerizing lapachol in the presence of concentrated sulfuric acid. Obtaining compounds derived from β-lapachone has also been widely explored for the synthesis of new compounds with trypanocidal activity, with naphthoimidazole derivatives being the most promising. Until the moment of elaboration of the mentioned project, according to the literature, 6,6-dimethyl-2-(p-toluyl)-3,4,5,6-tetrahydrobenzo[7,8]chromene[5,6-d] imidazole, obtained by the condensation reaction between β-lapachone, ammonia and 4-methylbenzaldehyde, is naphthoimidazole, derived from β-lapachone, which showed greater activity against T. cruzi and, for this reason, was chosen to undergo group approvals pharmacophores of commercial drugs with known antiparasitic activity, such as benznidazole and metronidazole, using a molecular hybridization strategy through copper (I)-catalyzed alkyne-azide cycloaddition reaction (CuAAC). In our planning, we will vary the position of the nitro group present in the imidazole centers, seeking to investigate the relationship of the different risks of reduction of each species of 2-, 4- and 5-nitroimidazole and to relate it to the observed activities against parasite cells, since the reduction potential of each nitroimidazole species changes according to the position of the nitro group in the ring. The results obtained in this work validated the molecular design used, generating improved hybrid molecules that were active against T. cruzi and had a higher selectivity index (lower toxicity against host cells).

2
  • DANDARA DE PAULA CANDIDO
  • Semi-empirical PM7 Study of Complexes Between SARS-CoV-2 Spike RBD with hACE2 Peptides, Candidate Inhibitors of Viral Infection

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • NELILMA CORREIA ROMEIRO
  • Data: Jun 21, 2023
    Ata de defesa assinada:


  • Show Abstract
  • At the end of 2019, the world experienced a new viral disease, currently called COVID-19, caused by the coronavirus SARS-CoV-2. COVID-19 has spread rapidly around the world, causing more than 6.94 million deaths to date. Among the proteins of SARS-CoV-2, Spike has aroused special interest, since the coronavirus uses it to bind through the receptor binding domain (RBD) to the converting enzyme of human angiotensin 2 (hACE2), thus initiating invasion into the host cell. A recent in vitro study demonstrated that hACE2-derived peptides containing the amino acid sequence EDLFYQ (SAP1, SAP2 and SAP6) are able to inhibit Spike-mediated viral infection. The objective of this project is to employ theoretical methods to investigate the interaction mode of these peptides with Spike’s RBD, in order to obtain information for the rational design of new peptides, candidates for SARS-CoV-2 infection inhibitors, exploring the covalent inhibition strategy. Because it involves the formation of covalent bonds, the study was conducted using the semi-empirical quantum method PM7, which is fast enough to be applied to whole proteins and their complexes. All calculations involved the complete RBD, using the continuum approach to include the effect of the external environment on energy minimization, without structural constraints. The proposal of the new peptides was based on the chemistry of sulfur-triazole exchange (SuTEx), which allows selectivity for the formation of covalent bonds with tyrosine residues. The SAPs were modified by the incorporation of warhead groups sulfonyl-triazole, and a new proposed warhead group, phosphonyl-triazole, in order to increase the efficiency of the interaction through covalent bond formation. ΔHint calculated correlated with experimentally determined Kd for SAP1, SAP2 and SAP6, and confirm the SAP1 peptide both in native and in SuTEx-type modifications as best candidates for RBD ligands, followed by SAPs 6 and 2, in this order. It was also observed that the covalent complexes formed by SAP1 derivatives containing sulfonyl-triazole warhead groups have a greater tendency to be formed in the medium in which they were studied than those containing phosphonyl-triazole warheads.

3
  • WILLIAM QUEIROZ FELIPPE
  • Synthesis and evaluation of the antifungal action of chalcones and their derivatives
    phenethyl-imino-chalcones and thiosemicarbazone chalcones

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • JACQUELINE SANTOS CRUZ
  • ANDRESSA ESTEVES DE SOUZA
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • Data: Aug 3, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Research in the field of Mycology indicates an alarming increase in the frequency of opportunistic fungal infections and among them, the actions of yeasts and filamentous fungi that cause various problems for the agrarian, food and pharmacological sectors are observed. Chalcones are composed of relevant applications for organic synthesis, since they are substrates that allow a wide variety of structural modifications, producing new structures with the most diverse biological properties. Of the eight precursor chalcones synthesized for this work, four were selected due to previous evaluation against the species Aspergillus parasiticus and A. carbonarius, to proceed with the synthesis of the compounds of the phenethyl-imino-chalconas (FIC) classes and chalcone-thiosemicarbazones (CT). The FIC class was obtained from the respective chalcones and 2-phenethylamine in ethanol under microwave irradiation and the CT class was obtained through chalcones and thiosemicarbazide in ethanol under reflux. Both classes were evaluated for their antifungal capabilities against different species of fungi of the genera Aspergillus, Candida and Sporothrix, and were evaluated for their ability to chelate Fe2+, important biological factor for several fungi. The results of radial growth inhibition assays against strains of A. carbonarius and A. parasiticus showed significant improvements in fungal proliferation retardation activities of both classes of derivatives compared to precursor chalcones. MICs (minimum inhibitory concentration) of chalconic derivatives were evaluated against different fungal strains, presenting greater inhibitory capacity against C. albicans for FIC-Cl (3,90 μg mL-1 ), C. krusei for CT-H, CT-F, CT-Cl and CT-Br (3,90 μg mL-1 , 7,80 μg mL-1 , 7,80 μg mL-1 and 3,90 μg mL-1 , respectively), C. tropicalis for FIC-Cl (125 μg mL-1 ), S. schenckii for FIC-H, FIC-F, CT-H (500 μg mL-1 , 250 μg mL-1 and 500 μg mL-1 , respectively), S. brasiliensis for FIC-F (250 μg mL-1 ) FIC-H, FIC-Cl, CT-H, CT-F, CT-Cl and CT-Br (500 μg mL-1 ) and Sporothrix spp. (clinical strain) for derivatives FIC-H, FIC-F, CT-H, CT-F, CT-Cl and CT-Br (500 μg mL-1 , 500 μg mL-1 , 500 μg mL-1 , 250 μg mL-1 , 125 μg mL-1 , 500 μg mL-1 , respectively). The evaluation of chelating activity indicated the greatest effects for the most active derivatives against Candida species (CT-Br, CT-Cl and FIC-Cl) suggesting complexation with Fe2+ ions. In general, the CT derivatives presented higher antiproliferative effects and, thus, with the results of this work it is expected to contribute to the development of new antifungal agents for the control of mycotoxigenic fungi.

4
  • FRANCIELLE DAIANE DE FREITAS LOPES LUNA
  • Evaluation of the pulicidal potential of the essential oil from Curcuma zedoaria against the ectoparasite Ctenocephalides felisfelis

  • Advisor : DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • COMMITTEE MEMBERS :
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • DENISE BRENTAN DA SILVA
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • JOÃO CARLOS PALAZZO DE MELLO
  • YARA PELUSO CID
  • Data: Aug 17, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Curcuma zedoaria, commonly known as zedoary, is a plant belonging to the Zingiberaceae family, native to India. It is currently cultivated in Brazil and in countries in South and Southwest Asia. In this study, the bioinsecticidal potential of the essential oil (EO) extracted from the rhizomes of C. zedoaria(Zingiberaceae) was evaluated. The EO was obtained by hydrodistillation (3h) and identified by GC/MS. The yield was 0.15%, and the three main chemical constituents found were 1,8-cineole (24.11%), camphor (12.13%), and curzerenone (9.68%). In the bioassays conducted for the reproductive stages of the flea C. felis felis, using the filter paper impregnation method, with final concentrations of C. zedoariaEO ranging from 10 to 1000 μg.cm-2. The results showed that adult fleas exhibited 100% mortality starting from the concentration of 800 μg.cm-2at 24h and 48h, differing from the pupal stages with 94.23% mortality at the concentration of 396 μg.cm-2, larvae with 100% mortality at the concentration of 117.5 μg.cm-2at 24h and 48h, and eggs with 98% mortality at the concentration of 396 μg.cm-2. Regarding the inhibitory action of C. zedoariaEO on the acetylcholinesterase enzyme, as verified through the modified Ellman method, it was observed that the activity observed, using the EO, when compared to the control, demonstrated low inhibition, as the oil inhibited approximately 20% of the enzymatic activity, even at its highest concentration. In toxicity assays using the yeast S. cerevisiaeas a research model, it was observed that C. zedoariaEO exhibited high toxicity, as the assay resulted in mitochondrial damage, thus impairing cellular development. Further studies are required, as despite showing bioinsecticidal potential against different developmental stages of the flea C. felis felis, the EO proved to be toxic in the assays conducted with the yeast S. cerevisiae.

5
  • ATILA MENEGARDO MOFATI
  • DESIGN, SYNTHESIS AND THE ANTI-Plasmodium falciparum ACTIVITY OF HETEROCYCLIC COMPOUNDS OBTAINED FROM MULTICOMPONENT REACTIONS

    PLANEJAMENTO, SÍNTESE E AVALIAÇÃO DA ATIVIDADE ANTI-Plasmodium falciparum DE HETEROCICLOS OBTIDOS A PARTIR DE REAÇÕES MULTICOMPONENTES

  • Advisor : CEDRIC STEPHAN GRAEBIN
  • COMMITTEE MEMBERS :
  • CEDRIC STEPHAN GRAEBIN
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • DEBORA DECOTE RICARDO DE LIMA
  • OTAVIO AUGUSTO CHAVES
  • ROBERTA KATLEN FUSCO MARRA
  • Data: Aug 18, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Malaria is a potentially serious infectious disease caused by protozoa of the genus Plasmodium, which is widely distributed throughout the world. In 2021, it is estimated that there will have been about 247 million cases and 617 thousand deaths from malaria in the world. Being transmitted through the bite of mosquitoes of the genus Anopheles, malaria is more common in regions where there is a greater proliferation of these vectors, that is, in regions with a tropical and subtropical climate. The fight against malaria is made difficult due to several factors, among which: the resistance of the pathogen to the main treatments and the toxicity they have. Thus, it is necessary to search for new drugs capable of effectively combating the protozoan that causes the disease, in addition to having fewer side effects. The chromens are an class of molecules that have shown interesting biological activities, including the inhibition of protozoa. Furthermore, this class of compounds does not have high levels of toxicity, making them good candidates for the treatment of malaria. One of the ways to obtain chromenes is through multicomponent reactions that are reactions carried out in a one pot way, following the principles of green chemistry, that is, it maintains a great atomic economy, produces little waste and is safe. One of the multicomponent reactions that stands out is the Hantzsch reaction, which generates, as a product, a series of heterocycles of interest, and from a modification in the protocols it is possible to obtain an even greater diversity of compounds. From multicomponent reactions, a total of 28 different compounds were obtained, which were submitted to purity analyses, infrared spectroscopy and nuclear magnetic resonance in order to guarantee the submitted structure, later preliminary tests were carried out against the NF54 strain, sensitive to chloroquine.  

6
  • HEMILLY OLIVEIRA SOUZA
  • Investigation of Glycolaldehyde, Glyceraldehyde and Dihydroxyacetone Formation Models in the Interstellar Medium
  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • GLAUCO FAVILLA BAUERFELDT
  • LEONARDO BAPTISTA
  • LEONARDO DA CUNHA FERREIRA
  • LUCAS MODESTO DA COSTA
  • RICARDO RODRIGUES DE OLIVEIRA JUNIOR
  • Data: Aug 21, 2023
    Ata de defesa assinada:


  • Show Abstract
  • From observational research, about 204 complex organic molecules have been detected in interstellar and circumstellar medium. Furthermore, a diversity of organic compounds, including biomolecules, has been identified in fragments of comets and meteorites. Among such biomolecules, sugars and their precursors are of special interest. The general objectives of this work are: to investigate reaction mechanisms, not yet elucidated and under astrochemical conditions for the abiotic synthesis of the sugar precursors: glycolaldehyde (GLA), glyceraldehyde (GLI) and dihydroxyacetone (DI) in gaseous phase and on surfaces . The mechanism of GLA synthesis in the gas phase was investigated at CCSD(T)/M06-2X/aug-cc-pVTZ level, considering the elementary reactions: R1: CO + CH3OH, R2: H2O + CH2CO, R3: HCO + CH2OH , R4: OH + CH2CHO and R5: H2CO + trans-HCOH, all leading to the formation of GLA, the R5 route being possible in two ways: the first through the abstraction of the hydrogen of O-H from trans-HCOH by the carbonyl oxygen (R5a ), with an energy barrier of 10.1 kcal/mol; and the second way by the abstraction of the hydrogen of C-H from trans-HCOH by the carbonyl carbon (R5b), in a reaction without a barrier. Rate coefficients, obtained in the range of 10 - 500 K, are expressed by: kR1(T) = 1,8010-15 T0,7exp ( -86,11/RT), kR2(T) = 5,1910-14 T-0,12exp (-78,76/RT), kR3(T) = 3,6610-17 T2,18exp (-0,22/RT), kR4(T) = 2,9010-16 T2,11exp (-0,12/RT), kR5a(T) = 1,3410-9 T-1,93exp (-9,57/RT)andkR5b(T) = 8,7110-17 T2,17exp (0,03/RT). Rate coefficient calculations suggest that the barrier-free pathways R3, R4, and R5b are the most likely pathways for glycolaldehyde formation. A better distinction of R3, R4 and R5b occurs at high temperatures (~500 K), where R4 is the fastest. Rate coefficients for R4 decrease significantly with the lowering of the temperature and, around 100 K, route R5b shows the highest rate coefficient, being indicated as the most probable route of GLA synthesis, in colder conditions. Route R5b was extended to the formation of glyceraldehyde (trans-HCOH + GLA → GLI) and R5a to the formation of dihydroxyacetone (trans-HCOH + GLA → DI), showing rate coefficients expressed by: kR5b-GLI(T) = 6,4310-18 T2,18exp (0,12/RT)and kR5a-DI(T) = 6,7710-18 T1,98exp (-0,08/RT), in the range of 10 to 500 K. It is known that heterogeneous reactions, on surfaces of astrochemical grains, play an important role in the synthesis of compounds of increasing molecular complexity. Thus, the R5 reaction was also studied on a forsterite surface and periodic calculations at PBE level, adopting Vanderbilt ultrasoft pseudopotentials (USPP), suggest that formaldehyde and trans-hydroxymethylene reagents are adsorbed on the surface, reacting by Langmuir–Hinshelwood mechanism , in a similar way to R5a, leading to the formation of glycolaldehyde, which is strongly adsorbed, with adsorption energy equal to -205.03 kcal/mol. The intense adsorption of this precursor should allow consecutive reactions, leading to an increase in the complexity of surface sugars. Finally, this study allowed conclusions about the possible routes of abiotic synthesis of glycolaldehyde, glyceraldehyde and dihydroxyacetone.
7
  • EDUARDO BARROS DUARTE JUNIOR
  • Chemical Diversity of Eugenia uniflora L. (Myrtaceae) Essential Oils Acessed in the Coastal Lowlands, Metropolitan and Green Coast Regions of the State of Rio de Janeiro.

  • Advisor : MARCO ANDRE ALVES DE SOUZA
  • COMMITTEE MEMBERS :
  • DAVYSON DE LIMA MOREIRA
  • LEOPOLDO CLEMENTE BARATTO
  • MARCELO DA COSTA SOUZA
  • MARCO ANDRE ALVES DE SOUZA
  • Rafael Ferreira Da Silva
  • Data: Sep 29, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Essential oils (EOs) are natural products (NPs) that have been the subject of much research in recent years, especially those obtained from the extraction of aerial parts of aromatic plants that are part of the Atlantic Forest, which is home to a rich biodiversity of flora. Eugenia uniflora, popularly known as Surinam cherry, is an important species in this biome. Although there are studies showing information about the chemical profile of Surinam cherry EOs, few associate the diversity in chemical composition with biotic and abiotic factors, habitat and, above all, the genetic variability of different individuals of the same species. Thus, a study describing the chemical diversity of EOs extracted from native Surinam cherry specimens is important for a good understanding of the chemical profile, for future research in other areas and for valuing Brazilian heritage. This study was divided into two parts, the first being the search for published articles with information on the chemical profile of different Surinam cherry essential oils and the statistical analysis of the data for a better understanding and subsequent comparison. The second part was a demonstration of the methods, stages and results of the chromatographic analysis of the EOs, obtained by hydrodistillation, from native Surinam cherry specimens collected in fragments of the Atlantic Forest in the state of Rio de Janeiro, as well as a statistical analysis of these data, revealing similarities and differences with the data observed in the selected articles.

8
  • NATHALIA SOARES CAMARGO
  • Evaluation of antioxidante potential of unconventional food plant extract Xanthosoma sagittifolium L. Schott at Saccharomyces cerevisiae cells

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • DANIELA BARROS DE OLIVEIRA
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • CRISTIANO JORGE RIGER
  • DANIELA COSENTINO GOMES
  • RAQUEL SOARES CASAES NUNES
  • Data: Nov 17, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Unconventional Food Plants is the term used to refer to a group of plants that have one or more edible parts, whether native or cultivated, and are not part of the daily diet of the population. An example of this is Xanthosoma sagittifolium L. Schott (taro), where studies point to a range of potential activities attributed to this plant, such as anti-inflammatory, antidiabetic, and antioxidant properties. The chemical characterization of Xanthosoma sagittifolium L. Schott describes the presence of flavonoids. Therefore, when introduced into the diet, it can assist the body in maintaining cellular redox homeostasis, helping to prevent oxidative stress, which is a condition caused by the inability of the antioxidant defense system to control the action of oxidants in cells, which can lead to various damages. However, it is important to delve more deeply into the compounds present in this plant and to analyze in more detail the influence of its antioxidant activity using a biological model that takes into account physiological conditions and metabolic interactions. Thus, the toxicity and antioxidant potential of the aqueous extract of X. sagittifolium were evaluated through cell viability assays, mitochondrial functionality, lipid peroxidation, and intracellular oxidation levels. Two strains of S. cerevisiae were used in this study, one control and one with a deletion in the YAP1 gene, a transcription factor for antioxidant defenses in yeast. The chemical profile of the aqueous extract of X. sagittifolium was verified by HPLC-DAD. All analyzed concentrations of the extract in both strains were not found to be toxic. The analysis of the effect of the extract on cell viability revealed that pretreatment with the extract at a concentration of 0.6 mg L-1 can provide protection for both strains against the stressor used (H2O2) at a concentration of 1.0 mM. In antioxidant assays, for the control strain, the X. sagittifolium extract is capable of providing antioxidant protection to the cells. In contrast, the same was not observed in the mutant strain, where only in viability antioxidant assays was the X. sagittifolium extract able to provide protection to the cells, while in the other antioxidant assays, the strain exhibited a higher degree of sensitivity to oxidative stress. The chemical profile of the extract indicates the presence of flavonoids, accounting for 15 of the 17 peaks obtained in the chromatogram. In this study, it was indicated that the extract was non-toxic at the tested concentrations and exhibited antioxidant properties. These antioxidant properties can be attributed to the presence of flavonoids in the extract, suggesting that taro has the potential to be a promising source of compounds with antioxidant action.

9
  • CAMILA DA SILVA BARBOSA PEREIRA
  • Physiological and biochemical aspects of Alphitobius diaperinus (Panzer, 1797) (Coleoptera: Tenebrionidae) and botanical control with lemongrass essential oil (Cymbopogon citratus (DC) Stapf.)

  • Advisor : MARCO ANDRE ALVES DE SOUZA
  • COMMITTEE MEMBERS :
  • DANIELA COSENTINO GOMES
  • Flavio Jose da Silva Dantas
  • LILIA APARECIDA SALGADO DE MORAIS
  • MARCO ANDRE ALVES DE SOUZA
  • ROSANE NORA CASTRO
  • Data: Dec 15, 2023
    Ata de defesa assinada:


  • Show Abstract
  • The mealworm (Alphitobius diaperinus) is an opportunistic insect pest widely dispersed throughout the world (cosmopolitan), poultry farms where they proliferate as a result of favorable conditions, such as heat, humidity and availability of food (bird feed). In this context, the present study sought to understand some of the biological aspects of A. diaperinus and the effect of Cymbopongon citratus (lemongrass) essential oil on the stages of the insect's reproductive cycle, in addition to investigating the effects of lemongrass essential oil on aspects of mealworm metabolism. For this purpose, biological tests were carried out to observe the development of the mealworm under normal conditions and under the effect of essential oil in the larva, pupa and adult stages. Gravimetric, image and metabolic profile analyzes were used to verify aspects of the insect's biology, physiology and metabolism. After analyzing the insect's reproductive cycle, the female pupae were longer than the males. When adults, their lengths varied between 0.55 and 0.70 cm, with no difference between the sexes. In the larval stages, their weight increased. with its growth, in the last larval stage (L6) its weight did not differ from that of pupae and adults. With this, the exposure of mealworms to lemongrass essential oil by fumigation was also evaluated. It was observed that the toxicity is greater in the adult phase with LC50% of 0.23 mg/cm³ of air. Phases L3 and L6 presented LC50% of 1.25 and 1.8 mg/cm³ of air, respectively. It was also found that after 48 hours of exposure to essential oils at concentrations of 1.0 and 2.0 mg/cm³ of air, half of the adult insects were dead. In turn, half of the larvae population (L3) were dead after exposure for 72 hours at a dose of 5.0 mg/cm³ of air and half of the larvae (L6) after 48 hours. There were no effects of lemongrass essential oil on the insect's reproductive cycle when incorporated into food or sprayed on the breeding box. The evaluation of the metabolic profile of insects in the adult and larval stages (L3 and L6) made it possible to verify metabolites such as sugars, organic acids, amino acids, among others. In the control group, a reduction in amino acids was observed and in insects exposed to the essential oil, an increase in amino acids, glycerol and variation in sugar concentrations was observed. Based on the studies carried out, it is concluded that lemongrass essential oil has a toxic effect on insects in very high concentrations, making its use unfeasible as an alternative method for controlling insects.

10
  • BRUNO HENRIQUE DE MEDEIROS MENDES
  • A new approach in the search for matrix metalloproteinase (MMP) inhibitors: studies on semicarbazones and thiosemicarbazones via molecular modeling

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • MAGALY GIRÃO ALBUQUERQUE
  • RENATA BARBOSA LACERDA
  • Data: Dec 22, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Promising molecular targets for the search for new drugs for diseases such as dengue hemorrhagic fever, cancer, cardiovascular diseases and inflammation are matrix metalloproteases (MMPs), with emphasis on MMP-9, as it plays a central role in hemorrhagic and inflammatory processes and is frequently overexpressed in these pathologies. As there are different classes of MMPs, a central issue in the development of inhibitors of these enzymes is the search for selectivity. This project aims to analyze, using theoretical methods, the selectivity of semicarbazones (SC) and thiosemicarbazones (TSC), previously designed and synthesized by our group, in relation to MMP-9, aiming to design new candidates for selective inhibitors for this enzyme. Furthermore, the study seeks to analyze the pharmacokinetic properties of the most selective compounds using theoretical methods to determine their potential viability for human administration. Molecular docking studies were carried out with the structures of MMP-9 (PDB 6ESM) and MMP-1 (PDB 1HFC), with the Goldscore function. The complexes with the best poses were selected and subjected to geometric optimization via semi-empirical calculations with the PM7 method, adopting the protein in its entirety and in a continuous medium representing the solvent, to determine the interaction enthalpy of the compounds. The results show that ligands from the TSC group, in general, present a promising selectivity profile with human MMP-9, highlighting ligand 23b, which was used as the basis for a new series of more selective ligands. This approach resulted in relevant data on the interaction profile of TSC with the S1' sites of the MMP-1 and MMP-9 enzymes, explored in rational planning aiming at selectivity. The BH series ligands proved to be potentially selective, with emphasis on the BH02a molecule, which showed better interaction performance and selectivity for MMP-9 than 23b. The modifications were found to be beneficial for the predicted ADMET properties.The BH series balances solubility and membrane penetration, with improvements in TSC absorption, although BH02a and BH02b show slightly reduced absorption due to high polarity. Biodisponibility results indicate potential for oral drugs without PAINS alerts. With broad systemic distribution, especially the more lipophilic compounds in the BH series, they show potential for partitioning into lipid-rich regions such as the extracellular matrix. TSC inhibit CYP1A2, with BH01a also inhibiting CYP2C19, suggesting potential drug interactions, but proposed modifications reduced CYP3A4 inhibition. All compounds have low T1/2 and renal clearance, suggesting more frequent administration, and show no apparent cardiotoxicity. BH01a exhibits genotoxicity, and there is a general tendency toward hepatotoxicity, with 25, BH01, and BH01a being less hepatotoxic. TSC meet the FDA's maximum daily dose, indicating safe administration, and compounds 23b, 23c, 25, and the BH series have low acute toxicity, with BH01b, BH02, BH02a, and BH02b being the least toxic.

Thesis
1
  • ÉRICA BARBOSA DE SOUSA
  • Spectrophotometric determination of total organic carbon in soils with KMnO4, a new methodology with an emphasis 
    on Green Chemistry
  • Advisor : JOSE GERALDO ROCHA JUNIOR
  • COMMITTEE MEMBERS :
  • JOSE GERALDO ROCHA JUNIOR
  • CRISTINA MARIA BARRA
  • MARCOS GERVASIO PEREIRA
  • EVA LUCIA CARDOSO SILVEIRA
  • LUIZ FERNANDO SILVA CALDAS
  • Data: Mar 2, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Soil organic matter is of fundamental importance for various environmental functions associated with its cycling process. It is estimated by the total organic carbon (TOC) content and plays a key role in nutrient retention, soil aggregation, water dynamics, and acts as a primary energy source for biological activity. In Brazil, the wet oxidation methods Walkley and Black (WB) and Yeomans and Bremner (YB) are the most used to determine TOC. These methods are based on the organic carbon (CO) oxidation with potassium dichromate in a strongly acidic medium and subsequent titration of the remaining dichromate. However, there are several disadvantages associated with these methods, including environmental concerns due to the use of potassium dichromate, the high cost of storing and disposing of hazardous waste, and the requirement for large volumes of concentrated sulfuric acid, which is a controlled purchase reagent. Furthermore, these wet oxidation methods do not entirely oxidize the OC.  Elemental analysis is the reference and most reliable technique for determining the TOC, as it can fully oxidize OC. However, the costs for its implementation and analysis are high, making its use unfeasible in routine analyses. This work proposes the quantification of TOC of soils using KMnO4 as an alternative oxidant to K2Cr2O7 and the subsequent spectrophotometric determination of the remaining permanganate at λ=525nm. Ultraviolet-visible spectrophotometry is a well-established technique with low operational cost, which allows accurate and reliable results. Initially, the OC oxidation study was conducted using potassium biphthalate as the organic matter standard and a 23 factorial design in order to optimize the reaction conditions. The factors studied were time (30 and 60 minutes), temperature (60 and 95 ºC), and acidity (0.125 and 0.250 mol L-1 of H2SO4), with temperature being the factor that most influenced OC oxidation. The optimal reaction conditions were determined as 30 minutes, 95 ºC, and 0.125 mol L-1 H2SO4. The oxidability of the investigated organic compounds by KMnO4 was evaluated, obtaining results comparable to K2Cr2O7. For the spectrophotometric determination of the remaining permanganate, the influence of sample size was investigated for four different soil classes, with 500 mg being identified as the ideal mass. In the analysis of 16 soil samples, the TOC contents obtained by the proposed method correlated strongly with those obtained by the YB method (r = 0.966) and elemental analysis (r = 0.975). This new approach for determining TOC in soils can replace the methods currently used in soil laboratories since it is reliable, simple, cost-effective, and presents less risk to both the analyst and the environment compared to methods that use potassium dichromate.

2
  • HENRIQUE JEFFERSON DE ARRUDA
  • SYNTHESIS AND PHARMACOLOGICAL EVALUATION OF ZnII AND AgI COMPLEXES DESIGNED AS PROTOTYPES FOR THE CHEMOTHERAPIC TREATMENT OF INFECTIONS USING HYBRID LIGANDS
  • Advisor : AMANDA PORTO NEVES
  • COMMITTEE MEMBERS :
  • THIAGO CUSTÓDIO DOS SANTOS
  • AMANDA PORTO NEVES
  • GUSTAVO BEZERRA DA SILVA
  • LEONARDO DA CUNHA FERREIRA
  • ROBERTA KATLEN FUSCO MARRA
  • Data: Mar 20, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Neglected diseases are diseases caused by infectious agents and/or parasites and are considered endemic in low-income populations. These diseases have unacceptable indicators and reduced investments in research, drug production and their control, because of this, it is necessary to search for new drugs that cause better treatment for patients, in addition to being less toxic. Among the neglected diseases that will be addressed in this work are Chagas disease, Zika and Chikungunya, diseases with few or no drugs available. Within the context of medicinal chemistry, coordination compounds gained prominence due to their biological applications, for example, the treatment of cancer and arthritis, antimicrobial agents and enzyme inhibitors. Structural knowledge and understanding of the mechanisms of pharmacological action of these compounds are of fundamental importance in the development of new, more efficient and safer drugs for the human body. Coumarin and quinolone derivatives and various metal complexes have been studied for their potential as agents against neglected diseases. Thus, coumarin-imidazopyridine hybrid linkers of the ethyl 2-(R)-2-oxo-2H-chromen-3-yl)imidazo[1,2-a]pyridine-3-carboxylate (R = 7-Et2N) (HL1), 7-OCH3 (HL2), 8-OCH3 (HL3) and 6-CH3 (HL4)) and 2-(R)-2-oxo-2H-chromen-3-yl)imidazo[1,2- a]pyridine (R = 7-OCH3 (HL5), 8-OCH3 (HL6)) plus four quinolone-derived linkers of the 3-carboethoxy-4-oxo-1,4-dihydroquinoline type (R = 6-H (HL7 ), (6-F (HL8), (6-Cl (HL9) and (6-Br (HL10)) were synthesized. Reactions between ligands (HL1-HL6) and zinc chloride resulted in neutral complexes of the type [ZnCl2(HL1-6)2](C1-C6), and reactions between HL1-HL3 ligands with AgNO3 resulted in charged complexes [Ag(HL1-3)2]NO3 (C1Ag-C3Ag). Syntheses involving Zn(NO3)2, phenanthroline and the quinolone-derived ligands (HL7-HL10) resulted in the charged complexes [Zn(phen)(HL7-10)]NO3 (C7-C10). The crystal structures of the C2 complexes [ZnCl2(HL2)2] and C3 [ZnCl2(HL3)2] were determined by single crystal X-ray diffraction (XRD), which reveals showed the coordination of two ligands through the nitrogen of the imidazopyridine group, with two chlorines completing the metal coordination sphere and thus exhibiting a distorted tetrahedral geometry. In this work, the anti-cruzi, anti-zika and anti-chikungunya evaluation of four pairs of ligands (HL1-HL4) and complexes (C1-C4) was carried out. The anti-t.cruzi evaluation showed that, initially, the C4 complex was the most active molecule, having twice the activity of its corresponding ligand HL4 (12.4 and 22.8 µM), indicating that coordination can be be favoring the biological activity and even helping to make the ligand bioavailable in the biological environment. Furthermore, the antiviral evaluation of the ligands (HL1-HL4) and respective complexes (C1-C4) against Chikungunya (CHIKV) and Zika (ZIKV) showed that, in general, all compounds exhibited excellent antiviral activity, with highlight for the C2-C4 complexes, which were more active for ZIKV than their parent ligands (IC50 C2-C4 = 0.8 µM, IC50 HL2-HL4 between 1.2 and 4.8 µM) and about 4x more active than the Ribavirin control (IC50 = 3.95 mM). Against CHIKV, the HL3 ligand stood out, which exhibited higher activity than the control and very low cytotoxicity (IC50 = 0.67 µM and CC50 = 910 µM vs IC50 Ribavirin = 2.42 uM and CC50 = 297 µM ), resulting in excellent selectivity index (SI). Unlike what was observed for ZIKV, the activity of the ligands did not increase with complexation when it comes to CHIKV, however, all compounds are eligible to have their mechanisms of action studied, which is in progress.

3
  • GLEYTON LEONEL SILVA SOUSA
  • Design, synthesis, and biological prospection of anticancer and anticholinesterase activities of new acridine derivatives.

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • SINARA MÔNICA VITALINO DE ALMEIDA
  • JAMERSON FERREIRA DE OLIVEIRA
  • ARTHUR EUGEN KUMMERLE
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • Data: May 4, 2023
    Ata de defesa assinada:


  • Show Abstract
  • Diseases considered multifactorial such as Cancer and Alzheimer's Disease (AD) have high mortality rates and few effective treatments. In this work, we report the design, synthesis, and biological prospecting of fifty new acridines derivatives designed from two specific pharmacodynamic explorations: the inhibition of topoisomerase IIα, when the objective was directed to antiproliferative compounds; and cholinesterase inhibition, when AD was proposed. The first two report the pharmacological exploration of thirty-eight derivatives, from the hybridization of acridine nuclei and aromatic fragments derived from thiosemicarbazone, as the proposal for better pharmacodynamic adjustment to the target enzyme. In general, the highest activity was found for a monosubstituted acridine derivative DT-3OCH3-H (IC50 = 8.83 µM) against K562-Lucena 1 cells (resistant leukemic cells). Some more active derivatives were selected and showed interesting Topoisomerase IIα inhibition compared to amsacrine at 100 µM, with emphasis on the acridine–thiosemicarbazone derivative DL-08 (79%). Additionally, compounds selected for non-clinical toxicity testing did not show relevant signs of toxicity at the 2000 mg/kg dose in mice. The third chapter starts with an anticholinesterase screening of the derivatives of the first chapter. Compounds from the unsubstituted acridine (CL) series showed the best activity profile, where the CL-01 derivative (acetylcholinesterase, AChE = 2.47 μM; butyrylcholinesterase, BChE = 0.71 μM) was the most interesting. From these results, twelve new derivatives were proposed and synthesized aiming at changes in the benzylidene subunit, as well as the incorporation of additional biological activities, for example, antioxidant. Modification of the acridine subunit by tetrahydroacridine from tacrine has also been proposed. The inhibitory results indicated reproducibility in the profile against BChE, with emphasis on the activity for CL-DiTerc (AChE = 10.53 μM; BChE = 1.15 μM). The replacement of acridine by tacrine tetrahydroacridine (TA-H) led to a reduction in the inhibition potency (AChE = 13.60 μM; BChE = 5.38 μM). Enzymatic kinetics identified distinct inhibition modes between TA-H (mixed inhibition in AChE and BChE) and the acridine derivative CL-01 (non-competitive inhibition in AChE and mixed in BChE). Theoretical studies reproduced the profile identified in the kinetics, suggesting that in AChE the interactions of the CL derivatives are concentrated in the peripheral region and the channel, not being identified as direct interactions with the catalytic residues, distinctly from that found for TA-H. Additionally, studies indicated an antioxidant profile for CL-DiTerc (DPPH EC50 = 47.01 μM), as well as some evaluated compounds indicated the ability to complex metal ions (Zn2+, Cu2+, Fe3+ and Al3+), indicating that these compounds have multitarget activities.

4
  • TATIANE NICOLA TEJERO
  • PROPOSAL OF A KINETIC MODEL OF OXIDATION OF HYDROCARBONS AND SULPHURY COMPOUNDS IN THE TROPOSPHERE
  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • ALEXANDRE BRAGA DA ROCHA
  • EDUARDO HILLMANN WANDERLIND
  • GLAUCO FAVILLA BAUERFELDT
  • LEONARDO BAPTISTA
  • LUCAS MODESTO DA COSTA
  • Data: Jul 25, 2023
    Ata de defesa assinada:


  • Show Abstract
  • In recent decades, several programs have been developed with the aim of calculating rate coefficients for uni and bimolecular reactions, such as the Multiwell and POLYRATE programs, being the second the most used. Despite the excellent performance of these programs in the calculation of rate coefficients, the need to investigate special cases such as dissociation reactions and complex mechanisms instigate the development of new programs. KINPRO is a package composed of several computational codes in order to perform calculations of kinetic parameters based on the conventional or variational transition state theory. It includes KINP pre-processing facilities plus other programs like KDIS, KUNI and MULTI, as well as KCVT, which is the canonical rate coefficients calculation program. The mechanisms obtained through theoretical calculations of the reaction of 1-pentene + OH radical and the oxidation of dimethylsulfide and its possible products were used to validate these programs. For the description of the mechanisms, GAUSSIAN 09 and ORCA programs were used. The addition of OH radicals to 1-pentene, described at the M06-2X/aug-cc-pVDZ level, allowing the study a small but complex system from the point of view of the multiplicity of conformers and reaction pathways, and to explain the non-Arrhenius behavior of experimentally observed global rate coefficients. Once dimethylsulfide enters the troposphere, it reacts with atmospheric oxidants, such as the OH or O3 radical, the former being described as preferential, due to its higher reactivity. This oxidation leads to the formation of various sulfur products that act as cloud condensation nuclei formers and will directly interfere with the temperature of the region. Therefore, there is a great interest in studies involving accurate forecasting of climatological events and, although there are several experimental works, there is not a wide range of theoretical works in this area. This work aims at developing a mechanism for the reactions between DMS and the OH radical and other sulfur compounds that are formed and to develop the kinetics of these reactions. To create this model, around 67 reactions were selected and theoretical calculations at the M06-2X/aug-cc-pVTZ theory level were made. Among these there are several uni and bimolecular reactions which opens space for a large number of tests. The results suggest that the computational implementations were successful, generating higher quality results than those that had already been calculated. The package is finally recommended for research in Theoretical Chemical Kinetics.

5
  • COSME HENRIQUE COÊLHO DOS SANTOS DE OLIVEIRA
  • SPECTROSCOPIC STUDY OF THE INTERACTION OF COMPOUNDS
    BIOACTIVES WITH HUMAN SERUM ALBUMIN (ASH)

  • Advisor : JOSE CARLOS NETTO FERREIRA
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • JOSE CARLOS NETTO FERREIRA
  • JOSUÉ SEBASTIAN BELLO FORERO
  • MARCO EDILSON FREIRE DE LIMA
  • RODRIGO JOSÉ CORREA
  • Data: Aug 28, 2023


  • Show Abstract
  • Spectroscopic studies were carried out for the interaction of bioactive compounds from the classes of thiosemicarbazones (UTS, DFTS and TFTS), metformins (MFCl, MFBr and MFCF3), chalcone (IC9) and xanthones (1MXT, 2MXT, 4MXT, 23MXT and 34MXT) with human serum albumin (ASH). Through fluorescence spectroscopy studies, it was found that all thought bioactive compounds interact with ASH in the ground state through a static fluorescence discharge mechanism, which is indicated by the decrease in KSV values with increasing temperature, as well as kq values of the order of 1013 M -1 s -1 . The values of the association constant (Ka) for all observed cases were of the order of 104 M −1, showing a moderate interaction of those compounds with ASH and the results of circular dichroism (DC) indicated a weak disturbance in the secondary structure of albumin after the interaction with the ligand. Thermodynamic parameters for thiosemicarbazones suggest that the binding process is controlled entropically (ΔS° between 0.022 and 0.072 J/mol.K) and enthalpically (ΔH° between -32.3 and -4.9 kJ/mol), with values compatible Gibbs free energy change (ΔG° between -39 and -24 kJ/mol). The interaction between each halogenated metformin and ASH is spontaneous (ΔG° between -28 and -26 kJ/mol) and entropically conducted (ΔS° between 0.120 and 0.147 J/mol.K) with an enthalpically unfavorable interaction (ΔH° between 9.48 and 18.5 kJ/mol). For the interaction between chalcone IC9 and ASH, the thermodynamic parameters indicate a spontaneous interaction with compatible Gibbs free energy (ΔG° = -27.9 kJ/mol) that is both enthalpically driven (ΔH° = -20.8 kJ/mol) and entropically (ΔS° = 0.023 J/mol.K) For the interaction between xanthones and ASH, the thermodynamic parameters suggest that the binding process is attended entropically (ΔS° between 0.008 and 0.068 J/mol.K) and enthalpically ( ΔH° between -25.5 and -7.2 kJ/mol), with compatible Gibbs free energy change values (ΔG° between -28.2 and -27.3 kJ/mol). Competitive binding experiments in the presence of warfarin, ibuprofen and digitoxin site markers suggest that thiosemicarbazones UTS, DFTS and TFTS compete for the same warfarin binding site, indicating Sudlow's I site as the main binding site. Competitive binding studies for MFCl, MFBr and MFCF3 in the presence of warfarin, ibuprofen or digitoxin also indicated the Sudlow I site as the main binding site. There is only one major binding site for IC9, which is located at Sudlow site I. For 1MXT, 2MXT, 4MXT, 23MXT, and 34MXT, competitive binding experiments in the presence of site markers warfarin, ibuprofen, and digitoxin suggest that monomethoxylated compounds prefer to complex at the Sudlow I site, while dimethoxylated compounds have a greater tendency toward complexation with Sudlow site II.

2022
Dissertations
1
  • ERICA CABRAL FAGUNDES
  • EXTRACTION OF OIL FROM COFFEE GROUNDS, BIOACTIVE COMPOUNDS AND THEIR APPLICATION IN PEEL-OFF TYPE FACE MASKS

  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ROSANE NORA CASTRO
  • JOSE GERALDO ROCHA JUNIOR
  • TATIANA SALDANHA
  • REGINA LUCIA PELACHIM LIANDA
  • Data: Jun 3, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Coffee is the most consumed beverage in the world, and the second most commercialized commodity, generating numerous residues from its processing and consumption. Coffee grounds are the most expressive residue of this production, currently much appreciated for its numerous applications in industry and research, its most valuable component being the oil obtained by extraction with organic solvents. In the present work it is proposed to carry out studies with coffee grounds obtained from two different species (Coffea arabica and Coffea canephora) from the states of São Paulo and Minas Gerais for the extraction of lipids through a Soxhlet extractor using ethanol and n-hexane, after the drying process. The yields obtained from the oil extraction were from 63.83 for the A3E sample to 5.75 for the CH sample. The acid value of the samples ranged from 4.04 mg KOH/g of oil for the 100% Arabica A1 sample to 11.96 mg of KOH/g of oil for the 100% Conilon sample. Given the possibility of obtaining different results for the quantification of fatty acids for the same sample depending on the esterification method used, in this work the acid profile of coffee grounds oil was investigated through three methods involving acid catalysis (BF3/MeOH, and CH3OH/) and basic catalysis (MeONa/MeOH). The main fatty acids identified were palmitic acid (18.50-52.59%), linoleic acid (0-38.18%), oleic acid (2.87-17.69%) and stearic acid (5.49-17.90 %). The contents and chemical profile of fatty acids were obtained by means of gas chromatography with flame ionization detector (GC-DIC) and gas chromatography coupled with mass spectrometry (GC-MS). There were no significant differences in the lipid profile of the samples, regardless of the solvent used, as well as the species originating from the coffee grounds evaluated (Coffea arabica and Coffea canephora). The degree of swelling followed the profile of release of bioactive compounds present in the film and the highest gel fraction was presented by the conillon sample without washing. The films remained with their surface and integrity preserved. And the presence of turbidity and coloration in the solution indicated the presence of bioactive compounds in suspension. The total phenol content in the four analyzed samples ranged from 6.00 ± 0.65 to 7.79 ± 0.58 mg GAE/100mg of sample. The lowest EC50 value was related to the conilon sample. The oil release test in the “peel off” mask showed that the type of coffee, the type of solvent and the washing of the lees significantly interfere with the release of fatty acids, at 232nm Arabica coffee obtained greater release compared to Conilon and at 210nm masks containing Conilon coffee released more than arabica. The wavelength of 210nm (palmitic acid) obtained the best results in the release, and at 232nm (linoleic acid) the release was much lower. In the caffeine and chlorogenic acid release test, sample A2 showed the highest rate of release of both chlorogenic acid (50rpm – 115%, 100rpm – 114.98%) and caffeine (50rpm – 78.22, 100rpm – 61.99), followed by the Conilon sample, 50rpm – 34.81% and 100rpm – 22.40% for the release of chlorogenic acid and 50rpm – 19.88% and 100rpm – 39.65% for caffeine. It was possible to verify the great potential of the solid residue (coffee grounds) obtained daily as a raw material to be used in the cosmetic industry.

2
  • NATHALLY LIMA DO NASCIMENTO SILVESTRE
  • PLANNING BY MOLECULAR MODELING OF CANDIDATES FOR DUAL INHIBITORS OF PHOSPHOLIPASES A2 AND METALLOPROTEASES OF SNAKE VENOM

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • MAGALY GIRÃO ALBUQUERQUE
  • NELILMA CORREIA ROMEIRO
  • RENATA BARBOSA LACERDA
  • Data: Jun 27, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The search for drugs with antivenom action can significantly contribute to the treatment of victims of snakebites. Given the complexity of the mechanism of toxic action of snake venoms, enzymatic inhibitors with multi-target action seem to be the most promising for this purpose. Molecular modeling is a tool that can help in the design of new drugs with this profile. Thus, this work aimed to design, through molecular modeling methods, compounds that are candidates for dual inhibitors of two of the main types of enzymes present in Brazilian snake venoms, metalloproteases (MP) and phospholipases A2 (PLA2). In a first step, molecular docking and semi-empirical molecular orbital methods were applied to the study of structural and energetic aspects of human PLA2 inhibition by indole compounds with known inhibitory activity. This previous study allowed us to identify important pharmacophoric elements for the interaction of the compounds with PLA2. Study with the crystallographic structure of PLA2 from Bothrops jararacussu indicated that the conformation was not appropriate to study the interaction. Thus, a model of B. jararacussu PLA2 was constructed using human PLA2 as a template. The model had a more open conformation in the active site, which proved to be adequate to interact with the ligands in the following studies. As the objective is the development of dual action ligands, a study with a model of B. pauloensis MP, previously developed by our group and used in the design of effective inhibitors of snake venom MP, was implemented. Having information on the interactions of the two enzymes, pharmacophoric models were proposed for their inhibitors, which were combined to propose a series of structural modifications in thiosemicarbazones that already showed inhibitory activity on a PM isolated from the venom of B. pauloensis. Molecular docking and semi-empirical molecular orbital methods were used to study the interaction of these compounds with snake MP and PLA2 binding sites in order to evaluate the effects of proposed changes in the interaction with both, including structural and energetic information. All the designed compounds showed favorable interaction profiles with the two enzymes; the TmF-B ligand showed to be very promising, presenting a more favorable interaction enthalpy value in PLA2 than the reference PLA2 inhibitor (11S), as well as showing more favorable interaction energy in MP than the reference inhibitor (18). In a next step, the most promising compounds will be synthesized and evaluated experimentally to verify if there is indeed inhibition on snake MP and PLA2, which would characterize them as multi-target inhibitors with potential application in the treatment of snakebites.

3
  • LETICIA BERSOT DE OLIVEIRA
  • NEW INDOLE ACYLGUANIDINES DESIGNED AS SELECTIVE BUTYRYLCHOLINESTERASE INHIBITORS
  • Advisor : RENATA BARBOSA LACERDA
  • COMMITTEE MEMBERS :
  • BAUER DE OLIVEIRA BERNARDES
  • MARCO EDILSON FREIRE DE LIMA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • ROSANE NORA CASTRO
  • Data: Jul 18, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Alzheimer's Disease (AD) is a neurodegenerative disorder that affects memory and motor functions, being considered a multifactorial disease of undetermined origin. The main therapeutic strategy for the treatment of AD is the use of anticholinesterase drugs, inhibitors of acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) enzymes. The present work aims at the structural design, synthesis, characterization, in vitro and in silico evaluation of a new series of 1H-indole-2-acylguanidinic derivatives designed as candidates for cholinesterase inhibitors. The proposed derivatives were designed through the bioisosteric exchange of the 4,5-dibromopyrrole nucleus, present in the selective inhibitors of BuChE described in Goulart’s doctoral thesis (2021), by the indole aromatic heterocycle. The synthesis of derivatives was based on obtaining the key intermediate tert-butyl-(1H-indol-2-carboxamido)(methylthio)methylene)carbamate through the reaction between indolic acid chloride and mono-protected isomethylthiourea and later condensation with benzylamines of interest, followed by removal of the protection group in an acidic medium. The products were characterized by 1H and 13C NMR. In vitro screening of AChE and BuChE inhibition highlighted the best products (28c) and (28d) as selective inhibitors of BuChE, which inhibited BuChE activity by more than 60% at a concentration of 30 µM and with an IC50 of 5.997 and 5.498 µM, respectively. The structure-activity relationship corroborated previous results that already pointed to the importance of the free acylguanidine function for the inhibition of BuChE, and also indicates that the presence of bromo substituents in the heteroaromatic ring seems to be important for the activity of these derivatives, which still needs to be proven from the evaluation of brominated indole analogues. Additionally, halogenated substituents on the benzyl ring of acylguanidine favored anti-BuChE activity. Using the SwissADME tool, it was possible to predict that the new acylguanidines have good pharmacokinetic potential. Molecular docking studies carried out made it possible to understand the possible modes of interaction of compounds with BuChE. As perspectives, we have the proposition of new analogues of the series obtained for its optimization, as well as for a better understanding of the structure-activity relationship. The results showed that the structural planning was successful, but there was no optimization regarding the enzymatic activity. As future perspectives, we carry out assays of antioxidant activity and complexation with metals, in addition to proposing new analogues in an attempt to optimize the anti-BuChE activity, as well as for a better understanding of the structure-activity relationship. Additionally, we intend to investigate other pharmacological targets for the indole and dibromopyrrolic acylguanidines.

4
  • NAYANA DE FIGUEIREDO PEREIRA
  • Evaluation of essential oils of the species
    Brazilian Baccharis trimera (Less.) DC) and Mimosa
    Benth verrucosa against Ctenocephalides felis felis

  • Advisor : DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • COMMITTEE MEMBERS :
  • VERIDIANA MARIA BRIANEZI DIGNANI DE MOURA
  • CATHARINA ECCARD FINGOLO
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • CRISTIANO JORGE RIGER
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • Data: Jul 22, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Fleas of the species Ctenocephalides felis felis are the most common ectoparasites found in
    dogs and cats, which can cause more serious reactions and damage. Studies show that Brazil
    presents a growing population of dogs and cats composing family structures, and in case of
    manifestations of ectoparasites in pets, this interaction causes transmission to humans. So, the
    search for ways to reduce contamination has increased considerably. some oils
    essential oils have already been used as an alternative for the control of these ectoparasites, since
    which are natural products that cause less damage to the environment. With that, the present
    study aims to identify the compounds of essential oils of Brazilian species
    Baccharis trimera and Mimosa verrucosa Benth, to evaluate the in vitro activity against the ectoparasite C.
    felis felis in all stages of development and to evaluate the toxicity from the eukaryotic model of
    Saccharomyces cerevisiae to determine the pulicidal action. Both essential oils showed
    terpenic compounds, being the major components found by chromatography analysis
    gasa in the essential oil of B. trimera were carquejila acetate (33.0%), β-pinene (5.5%),
    β–elemene (5.9%), γ-murulene (5.6) and caryophyllene alcohol (7.0%) and in the essential oil of M.
    verrucosa were β-pinene (14.2%), α-pinene (10.7%), sabinene (9.5%), E-caryophyllene
    (13.8%) and γ-himachelene (8.1%). Toxicity tests demonstrated a low toxicity to
    both oils at a concentration of 0.2 mg/mL, showed no damage to the mitochondria and
    demonstrated regular cell growth to the control curve. In vitro assays showed
    100% effectiveness against all phases of the life cycle of C. felis felis fleas, being the oil
    essential of B. trimera ideal against adult fleas (800 μg.cm-2; LC50= 369.22 μg.cm-2) in 24
    and 48h and the essential oil of M. verrucosa ideal against flea larvae (791.2 μg.cm-2; LC50 =
    266.29 μg.cm-2 and LC50 = 240.54 μg.cm-2) at 24 and 48h, respectively. It is a study with results
    satisfactory and with potential for the development of alternative products from the
    bacteria of Baccharis trimera and Mimosa verrucosa in the control against Ctenocephalides felis felis.

5
  • WLADYMIR MENDES CARVALHO DE CASTRO
  • Evaluation of the in vitro activity of the essential oil of Caesalpinia pulcherrima
    (L.) Sw. against immature and adult stages of Ctenocephalides felis felis.

  • Advisor : DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • COMMITTEE MEMBERS :
  • ANDRE MARQUES DOS SANTOS
  • CATHARINA ECCARD FINGOLO
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • NEIDE MARA DE MENEZES EPIFANIO
  • Data: Aug 2, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The interaction between humans and animals has increased more and more, and with that, the
    concern for the health of these animals. Cats and dogs are susceptible to
    infestation by ticks and fleas, with Rhipicephalussanguineus and
    Ctenocephalidesfelisfelis the most common. The cat flea, known as C. felisfelis, is

    5

    a hematophagous, wingless insect that parasitizes domestic animals, which need
    daily food. In this way, animals constantly suffer from skin irritations,
    anemia and allergic dermatitis. Faced with the development of resistance of these insects against
    to treatment with chemical products, essential oils are shown as alternatives
    promising, since they already have described activity against some insects. Knowing this
    potential of essential oils, the present work aims to extract the essential oil
    of C. pulcherrima, identify its components, evaluate its insecticidal activity against
    adult and immature stages of the cat flea. In vitro screening tests were performed,
    to evaluate the behavior of fleas against the essential oil, in 10 concentrations
    different in the period of 24 and 48 hours using 10 fleas. The technique was used
    impregnation on filter paper. The essential oil of C. pulcherrima is rich in germacrene D
    (47.04%) and showed activity against C. felis. Against adults, it was possible to observe
    mortality of 15% and 40% at 800 μg cm -2 , within 24 and 48 hours, respectively.
    Against eggs and pupae, 100% mortality was observed at the maximum concentration (800 μg cm -
    two ); against larvae, maximum mortality was observed at 400 μg cm -2 at both times.
    tested. The activity of the essential oil was also tested, in two concentrations, in the inhibition
    of the enzyme acetylcholinesterase, but it was not possible to observe this inhibition against the two
    analyzed concentrations. The essential oil studied showed significant activity both
    for adults and the immature stages of C. felis, concluding that it can be a great
    candidate for flea control, being used as an alternative to
    development of natural pesticides.

6
  • DÉBORAH MENEZES DE LIMA
  • Theoretical study of the pathways for the formation of amine precursors of amino acids in the interstellar medium

  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • DIANA PAULA DE PINHO ANDRADE
  • GLAUCO FAVILLA BAUERFELDT
  • LEONARDO BAPTISTA
  • ROBERTO BARBOSA DE CASTILHO
  • Data: Aug 29, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Amino acids have been detected in meteorites since the 1970s (Shivani, et al., 2017).
    To understand the formation of these amino acids in the interstellar medium and in astronomical bodies, it is necessary to understand the formation and development of their possible precursors. In this work, we want to analyze the possible paths for successive reactions of hydrogen dissociation of ethylamine and dimethylamine, using a retrosynthetic analysis strategy, through theoretical calculations, at CCSD(T)/aug-cc-pVTZ//M06-2X/aug-cc-pVTZ level. These calculations aimed at geometry optimizations, determination of vibrational frequencies and reaction paths. Reaction paths were obtained with the hypothesis that they are dissociation associated with barrierless recombination reactions, therefor, saddle points were not located. Dissociation energies were found in the range from 14 – 123 kcal/mol. The lowest energy path, starting from ethylamine, was identified in the sequence of steps: CH 3 CH 2 NH 2 ← CH 3 CHNH 2 ← CH 3 CHNH ← CH 3 CHN ← CH 3 CN ← CH 2 CN ← CHCN ← CCN. Similarly, the lowest energy path, starting from dimethylamine, comprises the steps: CH 3 NH 2 CH 3 ← CH 3 NHCH 2 ← CH 3 NCH 2 ← CH 3 NCH ← CH 3 NC ← CH 2 NC ← CHNC ← CNC. Velocity coefficients were calculated by the canonical variational model, for
    the temperature range from 10 K to 300 K, typical for astrophysical environment, showing a tendency for the constant to increase with increasing temperature. The nitriles and some radicals presented were observed in the interstellar medium, corroborating the reaction pathways proposed as possible routes for the formation of amine precursors of amino acids.

7
  • DANNIEL COSME NEVES GRILLO
  • Evaluation of the antioxidant potential of triazole derivatives acetylcholinesterase inhibitors in Saccharomyces cerevisiae cells

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • FLÁVIA DE PAOLI
  • ANA PAULA PEREIRA DA SILVA
  • CRISTIANO JORGE RIGER
  • DANIELA COSENTINO GOMES
  • MARCOS DIAS PEREIRA
  • Data: Sep 15, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Alzheimer's Disease (AD) is a progressive neurodegenerative disease known for memory loss and difficulty with language. A set of pathological factors forms it and among them, the cholinergic deficit and oxidative stress stand out. Oxidative stress is characterized by the imbalance between the generation of free radicals and/ or non-radical reactive species and the action of antioxidant defense systems. Currently, the main treatment for Alzheimer's disease is the use of inhibitors of cholinesterase enzymes. However, due to the multifactorial nature of the disease and the fact that many drug candidates have not been successful, a new approach has emerged, the so-called “multi-target” compounds. Therefore, this work evaluated the antioxidant protection of four new compounds containing the core 3-amino-1,2,4-triazole-N-1,5-trisubstituted cholinesterase inhibitors in two strains of Saccharomyces cerevisiae (BY4741 and ∆gsh1) with oxidative stress induced by hydrogen peroxide. The toxicity of the compounds was initially analyzed through the semi-qualitative assay with resazurin and cell growth curves. Antioxidant assays were TBARS and intracellular oxidation by 2,7'- dichlorofluorescein. In the resazurin assay, there was no toxicity of the compounds in the two strains at concentrations below 250 mM. The growth curves confirmed this non-toxicity in the concentration of 20 µM of the compounds for 24h. In strain BY4741 all compounds reduced MDA levels between 30-40%, however in strain ∆gsh1 only compounds containing phenolic substituents were active (25%). In the evaluation of protection to the intracellular environment, only in the ∆gsh1 strain in the fermentative phase of growth, there was a significant reduction of oxidant species promoted by the compounds, with emphasis on the compound with nitro substituent (27%). In the oxygen consumption test, it was impossible to conclude the substances' mitochondrial protection capacity, since there was no statistical difference between the treatments, in both strains. The results demonstrated that triazoles were not toxic and provided antioxidant protection even in the absence of glutathione in S. cerevisiae cells.

8
  • ELISABETH ALVES DUARTE PEREIRA
  • Prospection of wild sage (Varronia curassavica Jacq.) in Atlantic Forest fragments in the states of Rio de Janeiro and Espírito Santo, in search of genotypes with higher b-caryophyllene and a-humulene content and biological properties

  • Advisor : MARCO ANDRE ALVES DE SOUZA
  • COMMITTEE MEMBERS :
  • LEOPOLDO CLEMENTE BARATTO
  • ANDRE MARQUES DOS SANTOS
  • MARCO ANDRE ALVES DE SOUZA
  • PEDRO CORREA DAMASCENO JUNIOR
  • Rafael Ferreira Da Silva
  • Data: Sep 30, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The wild sage (Varronia curassavica, Boraginaceae) is a native species that has medicinal properties and, therefore, of interest to the pharmaceutical industry. Little is known about the characteristics of the wild sage, especially those related to the essential oil extracted from its leaves. In this context, the chemical diversity of the essential oil of 36 plants of wild sage was studied, collected in coastal regions of Rio de Janeiro and Espírito Santo, in restinga vegetation. The plant material was stabilized by reducing the moisture content to around 15% and then the essential oil was extracted by hydrodistillation and subjected to chromatographic analysis (GC-DIC and GC-MS). After chemical characterization of essential oils, data were organized and subjected to descriptive and multivariate statistical analysis (ACP and AAH). The toxicity of the essential oils extracted against the insect pest Callosobruchus maculatus, the phytopathogenic fungus Pestalotia sp. and the epimastigote form of the protozoan Trypanosoma cruzi. The essential oil was also evaluated for its insecticidal and fungicidal toxic activity, and it was possible to observe a variation in the essential oil content from 0.34 to 4.20% and a total of 177 compounds identified. The highest essential oil contents were observed in EB24 (4.20%) and EB41 (3.93%) plants. The substances with the highest frequencies and highest concentrations were also highlighted, they are α-Humulene, Caryophyllene Oxide, Germacrene D, (2E,6Z)-Farnesol, Shyobunol and 2,3-dihydro-Farnesol. The analysis of hierarchical clusters discriminated the formation of 5 distinct groups: group 1 ((2E, 6Z)-Farnesol), group 2 (Shyobunol and Germacrene D-4-ol), group 3 (α-Santalene), group 4 (β -caryophyllene, Elemol and (2Z, 6E)-Farnesol) and group 5 (β-caryophyllene; 1,10-di-epi-Cubenol and 2,3-dihydro-Farnesol). On the other hand, when applying the criteria of dominance among the majority compounds (proposed by the research group), we observed only four different chemotypes (qt) among the 36 individuals studied: Shyobunol, Germacrene D (30.9; 17.3%); Shyobunol, Cubebol, Germacrene D (23.5; 12.3; 11.7%); Shyobunol, α-Santalene, Germacrene D (15; 14; 11.7%) and Shyobunol (31.7%). The essential oils tested did not show relevant toxic activity against the species C. maculatus and Pestalotia sp., on the other hand, two chemotypes were toxic against the epimastigote form of T. cruzi. These results point to a great intraspecific chemical diversity among the plants studied in situ, indicating that there are genotypes with potential to be explored from an agronomic and biological point of view against T. cruzi.

9
  • GEICY KELLY PIRES BARBOZA BADARÓ
  • Extract of Justicia brandegeeana as eco-friendly corrosion inhibitor of carbon steel AISI 1020 in sulfuric acid.

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • JANAINA CARDOZO DA ROCHA
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • LUCIANO RAMOS SUZART
  • Data: Oct 25, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The search for new organic eco-friendly corrosion inhibitors is increasingly necessary, given the high cost caused by corrosion and the existence of highly contaminant conventional inhibitors. Thus, in this dissertation was investigated the anticorrosive effect of the extract in ethanol of the aerial parts of the species Justicia brandegeeana (Acanthaceae), popularly known as red shrimp for carbon steel AISI 1020 in acid medium. Two samples were collected, the first in June 2021 and the second in October 2021 with high moisture content (70% and 69%, respectively) and low yields (4% and 3%, respectively). The extracts of both were analyzed by infrared, where it was noted that seasonality interfered only in the intensity of the bands, preserving the nature of the extracted classes of substances. Polar groups were identified, with the ability to present good corrosion inhibition, such as alcohols, carbonylas of carboxylic esters, and 1H and 13C NMR allowed the identification of the carbohydrate class. For all techniques the concentration of the extract varied in 250, 450, 750, 1000 and 1500 ppm. The electrochemical techniques of electrochemical impedance spectroscopy (EIS), potentiodynamic polarization (PP) and linear polarization resistance (LPR) were performed in an OCP of 5400 s and were consistent with each other, showing good corrosion inhibition efficiency for all concentrations studied, also showing that the inhibition efficiency is dependent on the inhibitor concentration. The PP curves also allowed to analyze that the extract is characterized as a mixed inhibitor, with a tendency to the cathodic region. Gravimetric analysis of mass loss allowed an evaluation in greater immersion times of carbon steel in the corrosive medium, which are: 3, 6, 24 and 48 hours. The results showed good corrosion inhibition efficiency for all concentrations evaluated, being more expressive at 1500 ppm with 94% inhibition at 6 h of immersion. All concentrations obtained their maximum efficiency at 6 h, stabilizing at 24 h, with decay at 48 h of immersion. When evaluating the effect of temperature variation, the extract showed good thermal stability, with 82% inhibition at 70 ºC, indicating a physisorption, and the efficiency was corroborated by the physicochemical parameters of Ea, ΔH ǂ e ΔS ǂ . The chelating activity of the extract in ethanol was also investigated against Fe+2 ions, and the extract showed 52% chelating effect, being thus in line with the results obtained by the techniques of evaluation of anticorrosive activity. In addition, the images of the morphology of the metallic surface, generated by scanning electron microscopy (SEM) indicated a surface protection with the presence of the plant extract, thus minimizing the roughness. These results make it possible to consider the ethanol extract of Justicida brandegeeana as an eco-friendly agent efficient in preventing corrosion of carbon steel AISI 1020 in H2SO4 1,0 mol L-1 medium.

10
  • RAFAEL TORRE
  • Study and evaluation of the toxicity of essential oils from brazilian peppertree (Schinus terebinthifolius Raddi) and bushy matgrass (Lippia alba [Mill.] N.E.Br ex Britton & P. Wilson): an organic approach for seed protection against bean weevil (Callosobruchus maculatus Fabricius, 1775)

  • Advisor : MARCO ANDRE ALVES DE SOUZA
  • COMMITTEE MEMBERS :
  • ANDRE MARQUES DOS SANTOS
  • CAROLINA RODRIGUES DE ARAÚJO
  • MARCELA DE SOUZA ALVES
  • MARCO ANDRE ALVES DE SOUZA
  • MARIA DO CARMO DE ARAÚJO FERNANDES
  • PEDRO CORREA DAMASCENO JUNIOR
  • Data: Dec 22, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The continuous use of synthetic pesticides has raised concerns about their residual effects on both the environment and human health, as well as an increase in agricultural pests resistance. Alternative methods are studied as a way of mitigating these consequences, and among them is the use of essential oils as a manner of controlling pests. This work aimed to assess the fumigation effects of 12 essential oils of different chemical compositions from genotypes of two plant species: Lippia alba (UFRRJ-ECB-021/022-QT: citral/limonene, UFRRJ-ECB-037/029/016-QT: citral, UFRRJ-ECB-003/008-QT: carvone/limonene e UFRRJ-ECB-028-QT: linalool) e Schinus terebinthifolius (UFRRJ-ARO-011-QT: α-pinene, UFRRJ-ARO-050-QT: sabinene, UFRRJ-ARO-079-QT: α-phellandrene/α-pinene, UFRRJ-ARO-025-QT: β-pinene/α-pinene, UFRRJ-ARO-032-QT: δ-carene/α-pinene, UFRRJ-ARO-094-QT: limonene, UFRRJ-ARO-078-QT: α-phellandrene/sabinene e UFRRJ-ARO-022-QT: mircene) against the cowpea weevil, Callosobruchus maculatus. Concentrations in the range between 0.10 mg/mL of air and 1.00 mg/mL of air were used to evaluate aspects from insect reproductive cycle, such as: mortality, egg laying, emergence of new adults and emergence rate. Furthermore, larval hatching and bean grain mass preservation were assessed in assays with the oils of the S. terebinthifolius genotypes: UFRRJ-ARO-032-QT: δ-careno/α-pineno e UFRRJ-ARO-094-QT: limoneno and with all L. alba oils. The results indicated reproductive cycle inhibition occurs in all oils tested, with the UFRRJ-ECB-028-QT:linalool oil having the lowest LD50 (0.1017 mg/mL of air). L. alba oils achieved better control of C. maculatus reproduction and improved seed protection.

Thesis
1
  • PAULO PITASSE SANTOS
  • Design, synthesis and biological assessment of peptides and peptide-drug conjugates with antibacterial and antiparasitic activity

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • MARCO EDILSON FREIRE DE LIMA
  • RENATA BARBOSA LACERDA
  • DANIELLE DE OLIVEIRA NASCIMENTO
  • NELILMA CORREIA ROMEIRO
  • JULIANY COLA FERNANDES RODRIGUES
  • ADRIANO DEFINI ANDRICOPULO
  • FERNANDO ANTÔNIO SANTOS COELHO
  • Data: Jan 10, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Peptides are composed of amino acids linked in sequence and comprise a class of molecules of interest within medicinal chemistry. Both for their high selectivity for specific targets and for the complexity of their structures, which allow them to be applied for different purposes, such as antimicrobials or cell penetrating agents conjugated to drugs. Peptides and conjugates are potentially applicable in areas lacking therapeutic innovation, such as the development of new antibiotics for the treatment of multidrug-resistant bacteria or new chemotherapeutic agents for the treatment of Chagas disease. In this work, three series of cationic amphiphilic peptides are proposed with potential application as antimicrobials and cell penetrating peptides. The peptide-drug conjugation strategy with or without control of drug release in the intracellular environment is also evaluated using peptides of interest within the proposed series and the type II polyroline helix P14LRR, which has been reported as an antimicrobial and cell penetrating peptide. The synthesis of peptides and conjugates involved the use of classical organic synthesis techniques, with optimization of protocols found in the literature, as well as the solid phase peptide synthesis methodology. The drugs linezolid (Lnz) and benznidazole (Bzd) were used for the conjugation strategy. Peptide-drug conjugates connected via a spacer containing a disulfide bond, reducible in the intracellular medium, were evaluated for their chemically induced drug release kinetics. Additionally, the peptides and conjugates were evaluated against Escherichia coli for their antimicrobial activity and insights into the mechanisms of action. The design of the series made it possible to trace a structure-activity relationship, and the peptide Ac-YGRRLLRRLL-NH2 was identified to be the most promising for this application (MIC = 2 µM). The activity against amastigotes and trypomastigotes of Trypanosoma cruzi was also evaluated. The peptide Ac-YGRRLLRRLLRRLLRRLL-NH2 showed high effectiveness in inhibiting parasite infection in vitro (EC50 = 299 ± 86 nM). Experiments were also carried out to evaluate the cell penetration potential of the Fl-YGRRLLRRLL-NH2 peptide and the Lnz-Fl-P14LRR conjugate, both labeled with a fluorescein probe. They used flow cytometry and confocal microscopy techniques to verify the accumulation of compounds in the intracellular environment and, in the case of Lnz-Fl-P14LRR, indicating its placing in lysosomes at the subcellular level.

2
  • VICTOR DE CARVALHO MARTINS
  •  Phytochemical study of three native species of Myrtaceae family from Atlantic Forest (RJ)

  • Advisor : MARIO GERALDO DE CARVALHO
  • COMMITTEE MEMBERS :
  • MARIO GERALDO DE CARVALHO
  • MARCO ANDRE ALVES DE SOUZA
  • JULIO CESAR ESCALONA ARRANZ
  • Monalisa Santana Coelho
  • ROBERTO CARLOS CAMPOS MARTINS
  • Data: Jan 28, 2022
    Ata de defesa assinada:


  • Show Abstract
  • MARTINS, Víctor de Carvalho. Phytochemical study of three native species of Myrtaceae family from Atlantic Forest (RJ). 2022. 208 p. Thesis (Doctor Science in Chemistry, Chemistry). Instituto de Química, Departamento de Química Orgânica, Universidade Federal Rural do Rio de Janeiro, Seropédica, RJ, 2022. The Atlantic Forest is one of the world hotspots, mainly in the state of Rio de Janeiro and in restingas due to the advance of urbanization. In these regions, the Myrtaceae family stands out, due to its great economic importance, different biological activities and high rate of endemism. The objective of this thesis was to identify the metabolites of native and unknown species of the Myrtaceae family, from the Atlantic Forest (RJ). For this purpose, instrumental chromatographic techniques were employed such as GC-FID, GC-MS, HPLC-DAD and HPLC-DAD-MS. The first study consisted of the characterization of the essential oil of Myrciaria tenella leaves, collected in Restinga da Marambaia (RJ). Thirty-six substances were identified by GC-FID and GC-MS, with the major composition of non-oxygenated terpenes such as β- and α-pinene (21.46% and 19.43%), E-caryophyllene (10.89%) and aromadendreno (9.17%). The chemical structure of the phenylpropanoid 2’,4’,6’- trimethoxyphenyl-butane was suggested as the fifth major constituent (8.45%), through the additional analyzes by 1H and 13C NMR. Furthermore, a high yield β-pinene/α-pinene-rich essential oil was obtained with only 2 h of extraction. The second study consisted of the dereplication of methanol extracts and subsequent partitions from Eugenia copacabanensis and M. tenella leaves. By GC-MS, HPLC-DAD and HPLC-DAD-MS analysis, 104 substances were identified, being 78 and 64 substances for each species and mostly reported for the first time for these plants. For the species E. copacabanensis, 3-O-caffeoylquinic acid – chlorogenic acid, methyl gallate, quercitrin, type B procyanidin derivatives and isomers of strictinin and tellimagrandin I were the main substances. In the extract and partitions of M. tenella, ellagic acid and its derivatives, such as 3,3'-O-dimethyl ellagic acid, and the flavonols quercetin 3-O-(6''-O-galoyl)-galactoside, quercetin 3-O-(6''-O-galoyl)-glycoside, hyperoside and isoquercitrin were mostly observed. Different classes were isolated or obtained in fractions, such as the sesquiterpene 2-methoxy-clovan-9-ol in the hexane partition of E. copacabanensis leaves, with structure elucidation by one- and two-dimensional 1H and 13C NMR experiments. The third study aimed to characterize a lyophilized product from Myrcia eriopus fruits. By HPLC-DAD and ESI-QToF-MS analysis, 5 monoglycosylated anthocyanins and 2 other phenolic substances (gallic acid and myricetin) were identified, with delphinidin 3-O-glycoside and petunidin 3-O-glycoside as the major substances. The lyophilized powder had a high content of anthocyanins and antioxidant potential when compared to other Brazilian fruits. All results have a positive impact on the preservation of these Brazilian native species, through the chemical characterization and the biological tests in collaborations research, with these results previously published in high-impact scientific journals

3
  • NEUBI FRANCISCO XAVIER JUNIOR
  • Computational Investigations of Glycine Polymorphism in Interstellar Medium: Phase Equilibrium and Surface Reactions.
  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • RICARDO RODRIGUES DE OLIVEIRA JUNIOR
  • ALEXANDRE AMARAL LEITÃO
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • GLAUCO FAVILLA BAUERFELDT
  • IVAN GUILHON MITOSO ROCHA
  • LEONARDO BAPTISTA
  • MARCIO SOARES PEREIRA
  • Data: Mar 24, 2022


  • Show Abstract
  • Glycine, the simplest amino acid, has already been detected in meteoritic and cometary samples. The understanding of its existence in the solid state, in the interstellar medium (ISM) is limited, due the lack of studies concerning its reactivity in this environment. Therefore, this work was developed aiming to investigate, by means of computational
    methodologies, the thermodynamic equilibrium of the alpha-, beta- and gamma-glycine polymorphs and their reactivity in the solid-gas interface, in ISM analogous conditions. Computational methodologies were applied adopting the Density Functional Theory, accordingly to the periodic boundary conditions formalism. The PBE functional was adopting with the dispersion correction, D3. The inner electrons were treated with the Vanderbilt Ultrasoft pseudopotentials. Kinetic cutoff energy values were tested and converged to 80 Ry. A k-points sample of the reciprocal lattice of 4 x 2 x 4, 4 x 3 x 4 e 3 x 3 x 4 were assumed for the alpha-, beta- and gamma-glycine, respectively. Vibrational properties were obtained by means of the Density Functional Perturbation Theory. The quasi-harmonic approximation was adopted for the estimation of solid-state thermodynamic properties. Calculated entropy values were slightly lower than experimental findings, with absolute deviations of 5.27, 0.13 and 5.42 J mol -1 K -1 , for the alpha-, beta- and gamma-glycine, respectively, at 298.15 K. The obtained Salpha - Sgamma difference value was of 0.44 J mol -1 K -1 , in good agreement with the experimental value of 0.35 J mol -1 K -1 , at 298.15 K. Gibbs free energy values were obtained in the range between 50 K and 500 K and at ambient pressure, being possible to suggest the correct stability order among the crystalline phase: gamma > alpha > beta. The gamma→alpha phase transition was suggested at 442.55 K, in excellent agreement with the experimental value of 440 K. Sublimation properties were investigated taking in consideration the gas-phase transformations between the zwitterionic glycine, present in the crystalline phase and the gas-phase most stable conformer. These energetic terms were obtained at the CCSD(T)/CBS level. Sublimation temperature values were estimated by means of the Clausius-Clapeyron equation, with a maximum deviation of -5.31 K for the alpha-glycine, in the pressure range between 0.1 and 1 Pa, in comparison with experimental findings. Glycine gas-phase decomposition reactions, forming CO2 and CH3NH2, catalyzed by a (010) alpha-glycine surface, were investigated. For this reason, a
    3 x 3 expansion containin 4 glycine layers was considered. A k-point sample of 2 x 2 x 1 was adopted. Decarboxylation reaction proceeded through a 4 steps mechanism, with barrier heights of 30.01, 112.10 and 108.83 kJ mol -1 , respectively. Therefore, the good agreement between computational investigations, reported here, and experimental findings, it is possible to suggest that the solid-solid and solid-gas reactivity model of glycine, proposed here, can be adopted for future investigations of the amino acids reactivity in the ISM.

4
  • VICTOR GABRIEL DE PAULA SAIDE
  • CHEMICAL ANALYSIS OF THE LEAD CORE OF RIFLE PROJECTILES BY WAVELENGTH DISPERSION X-RAY FLUORESCENCE (WDXRF) AND CHEMOMETRICS FOR FORENSIC PURPOSES

  • Advisor : JOSE GERALDO ROCHA JUNIOR
  • COMMITTEE MEMBERS :
  • ANDRE VINICIUS DOS SANTOS CANUTO
  • FLAVIO COUTO CORDEIRO
  • JOSE GERALDO ROCHA JUNIOR
  • LUIZ FERNANDO SILVA CALDAS
  • MARTHA MARIA ANDREOTTI FAVARO
  • Data: Apr 29, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Rifle bullets are usually deformed after firing, hampering the identification of the firearm that made the shot and consequently the shooter by ballistic comparison using optical microscopy. In such cases, knowledge of the composition of the bullets can be an alternative means of identifying their origin. In this work, wavelength dispersion X-ray fluorescence (WDXRF) was used for the first time as a tool to identify the origin of rifle projectiles, with the aid of chemometrics. A total of 66 samples of lead core from 7.62 caliber rifle projectiles were analyzed. These samples form 6 distinct groups of projectiles, considering the manufacturer and the year of manufacture: Companhia Brasileira de Cartuchos (CBC) of the year 2009 and of the year 2016, Israel Military Industries (IMI), Federal Cartridge (FC), Fray Luiz Beltrán (FLB) and Zavod Vlasim (ZV). Principal component analysis (PCA) on the spectral data discriminated these 6 projectile groups. The first 3 principal components (PC) were responsible for more than 99% of the variability in the samples. The spectral regions of antimony and X-ray scattering were decisive for the discrimination of the groups. The dendrogram obtained in the hierarchical cluster analysis (HCA) showed the formation of 6 groups with a relative distance of 0,85. The k-nearest neighbor (k-NN) analysis was able to correctly classify all 17 samples used in the test set, using 1 ≥ k ≥ 8. The smooth modeling analysis independent of class analogies (SIMCA) correctly classified all samples in the test set. The results were promising for forensic investigation purposes. The WDXRF technique proved to be viable for the analysis of lead core samples from rifle projectiles and the applied statistical analysis proved to be adequate for the discrimination of rifle projectiles from the spectral data. The percentage of elements obtained by the method of fundamental parameters were investigated by the same techniques (PCA and HCA), however the 6 groups of projectiles were not fully discriminated. The percentage of antimony proved to be decisive for the separation of some groups, mainly the CBC group of the year 2016, due to the high content of antimony that this group presented. Welch's analysis of variance (ANOVA), followed by the Games-Howell test, of the percentage of antimony confirmed that this element alone can differentiate almost all projectile groups. The WDXRF technique has the advantage of being simple and fast, in addition to preserving evidence as it is a non-destructive method.

5
  • ANDREZA DUARTE MEMELLI MENDONÇA
  • NEW EXPERIMENTAL PROPOSAL FOR BIODIESEL SYNTHESIS: EVALUATION OF REVERSE ADDITION OF 
    REAGENTS IN ALKALINE METANOLYSIS OF SOYBEAN OIL AT 25.0 °C
  • Advisor : JOSE GERALDO ROCHA JUNIOR
  • COMMITTEE MEMBERS :
  • JOSE GERALDO ROCHA JUNIOR
  • EVA LUCIA CARDOSO SILVEIRA
  • LILIA BASÍLIO DE CALAND
  • PRÍSCILA MARQUES DE SIQUEIRA
  • LUIZ FERNANDO SILVA CALDAS
  • Data: May 23, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The possible depletion of fossil fuels, the increase in CO2 emissions, and the growing energy demand have aroused interest in alternative sources of green energy. In this sense, biodiesel, a biofuel from renewable sources, has been used as an alternative to replace petroleum diesel. Research involving its synthesis is constantly advancing with the aim of optimizing more and more the process variables. Most of the studies employ a conventional synthesis methodology where the reactants are mixed with the direct addition of the catalyst/alcohol solution over the oil, under constant stirring and heating. This work sought to investigate and optimize an alternative, unprecedented proposal for the synthesis of methyl biodiesel, in which the gradual addition of soybean oil is carried out over the catalyst/methanol solution (inverted procedure), changing the sequence and speed of addition of the reagents. compared to the conventional methodology. The experiments were promoted at 25.0 °C for a lower energy consumption. The study was conducted using a 24 factorial design aiming at the optimization of the following reaction conditions: type of catalyst (NaOH and NaOCH3); synthesis time (40 and 60 minutes); stirring speed (400 and 600 rpm); and oil addition time in the catalyst/methanol mixture in relation to reaction time (percentage relative time, tR) (60 and 80%). After planning, studies were carried out to achieve greater conversions based on the evaluation of the effect of stirring speed (200, 300, 400, 500 and 600 rpm), tR (20, 40, 60 and 80%) and synthesis in two successive steps of transesterification, additionally, a comparison was made between the conventional and proposed synthesis procedures. The planning indicated that the tR and the time of synthesis were the main factors of influence in the conversion for the studied system. Conversions around 86% were obtained by applying tR of 60% for 60 minutes and 400 rpm with the two catalysts used (NaOH and NaOCH3). The post-planning study demonstrated that the strategy of slow addition of oil over the catalyst/alcohol solution achieved higher conversion averages at room temperature and low stirring speeds (up to 300 rpm) compared to the conventional method. The best condition used was performing the biodiesel synthesis in two transesterification steps of 60 minutes, tR of 20%, stirring speed of 300 rpm and NaOH as catalyst, resulting in a conversion of 96.6%. A high conversion of triglycerides was obtained using the proposed experimental procedure under milder conditions and with lower energy consumption when compared to conventional syntheses under heating. This result makes the new experimental procedure attractive for industrial application, considering that minimal changes in the manufacturing process will be necessary, which can even be compensated in the long term by the lower energy demand. The analysis of acidity index, specific mass, kinematic viscosity and ester content indicated the quality of the resulting biodiesel within the standards established by Brazilian legislation.

6
  • CINTHIA SANTOS SOARES
  • THEORETICAL APPROACH TO DISACCHARIDE- PHOSPHOLIPID MEMBRANE PROTOTYPE
  • Advisor : CLARISSA OLIVEIRA DA SILVA
  • COMMITTEE MEMBERS :
  • CLARISSA OLIVEIRA DA SILVA
  • CRISTIANO JORGE RIGER
  • MARCIO SOARES PEREIRA
  • CAMILA SILVA DE MAGALHAES
  • LEONARDO BAPTISTA
  • Data: Jul 6, 2022
    Ata de defesa assinada:


  • Show Abstract
  • The present thesis had as main objective to study the interactions between a disaccharide molecule and a phospholipid membrane prototype, formed by a dimer system composed of two phospholipid molecules. Such a study was carried out theoretically, using quantum methods for the modeling of molecular systems of interest: a method based on Density Functional Theory (B97-D/6-31G(d,p)) and a semi- empirical (PM6). The disaccharides considered were trehalose, maltose and cellobiose. The phospholipid considered was dioctanoyl-phosphatidylcholine. the study of such interactions involved the construction of the phospholipid membrane prototype and the creation of a protocol for the approximation of disaccharides to the prototype and occurred through the calculation of the interaction energy when in the formation of the interacting systems (disaccharide-phospholipid membrane prototype). With based on geometric criteria, two types of interactions were identified between all disaccharides and the phospholipid membrane prototype: interactions with phosphate groups and with trimethyl-ammonium groups. The Infrared absorption spectra for the membrane prototype phospholipid alone and for all interacting systems – four for the trehalose, three for maltose and two for cellobiose, in order to compare the behavior of the signal corresponding to the asymmetric stretching of the group phosphate for dry phospholipid aggregates and phospholipid aggregates in presence of different carbohydrates, indicated in the literature as differently affected by the presence of different carbohydrates. using an equation relating the value of the heteronuclear spin coupling constant with three 3 J C1,H1' bonds at the value of the dihedral angle defined by the sequence of C1–O–C1'–H1' atoms along the glycosidic bond of the trehalose, the respective values of 3 J C1,H1' were calculated for all four obtained interacting systems. From the Boltzmann population calculation for the interacting systems, an average value was obtained for the constant of coupling, which was compared to the experimental result available in literature. The energy values of disaccharide-prototype interaction of phospholipid membrane did not show agreement with the behavior of the signal corresponding to the asymmetric stretching of the phosphate group, this considering the lowest energy interacting systems, without zero point. This result was understood as a strong indication that interactions with trimethyl-ammonium groups also need to be considered in that assessment. The average value obtained for the coupling constant of heteronuclear spin, compared very well to the experimental value available in the literature, being an indication that the values of the glycosidic angles of the trehalose present in interacting systems theoretically obtained if to those assumed by the disaccharide in real interacting systems, in way that the PM6 method, used for modeling the systems interacting agents, can be pointed out as a computational method capable of adequately describe the stabilizing effects of the glycosidic bond of trehalose in this type of system.


7
  • LEONARDO ARAUJO SILVA
  • Synthesis and evaluation of the trypanocidal activity of new beta-lapachone-derived azoles

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • EUFRÂNIO NUNES DA SILVA JÚNIOR
  • ANDREA ROSANE DA SILVA
  • BAUER DE OLIVEIRA BERNARDES
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • MARCO EDILSON FREIRE DE LIMA
  • ROSANE NORA CASTRO
  • WANDA PEREIRA ALMEIDA
  • Data: Aug 8, 2022
    Ata de defesa assinada:


  • Show Abstract
  • More than 100 years after its discovery, Chagas disease still represents a challenge for humanity, since its treatment has serious gaps. In addition to not being satisfactorily effective in the chronic phase of the disease, the drugs used worldwide for its treatment, nifurtimox and benznidazole, cause severe side effects to patients treated with them. Thousands of people die each year due to this disease, which mainly affects tropical regions, such as Brazil. In Brazil, only benznidazole is authorized by the National Health Surveillance Agency (ANVISA) for the treatment of Chagas disease. Thus, it is essential that the scientific community dedicate itself to the search for new drugs for the treatment of Chagas disease, more efficient than the actual. In this sense, beta-lapachone derivatives have emerged as promising compounds, especially the azole derivatives. beta-lapachone is a naphthoquinone, found in several tree and shrub species of the Bignoniaceae family, among them, the ipê. In the last decades, several research groups, especially in Brazil, have been dedicated to the synthesis of beta-lapachone derivatives, to combat several pathogens, including Trypanosoma cruzi, which causes Chagas disease. In this work, 26 imidazole derivatives and 2 oxazole derivatives of beta-lapachone were synthesized, of which 21 are unpublished, in addition, a 2-amine-oxazole derived from ortho-phenanthroline-quinone was synthesized. Among the synthesized compounds, 16 were evaluated in vitro for trypanocidal activity, in addition to beta-lapachone, against the amastigote and trypomastigote forms of T. cruzi. Nine of the evaluated compounds were more active in the tests than beta- lapachone, under the conditions tested, among which, two were more active than the standard drug itself, benznidazole. It was also possible to verify that both present greater selectivity for the parasite than for the host cells. One of these two most active had its mechanism of action under the parasite investigated, and it was found that the main damage caused by the compound in question was in the mitochondria, causing swelling, and a washing aspect, in the organelle. In addition to the valuable results of trypanocidal activity, this work also enabled the development of a new method for the synthesis of 2-amine-oxazoles.

8
  • MARIANA FALCÃO LOPES PRINCISVAL CARLOS
  • SINTHESIS AND EVALUATION OF
    ANTICORROSIVE ACTIVITY OF -ENAMINOESTERS AND
    IMINOCHALCONES AGAINST CARBON STEEL AISI 1020 IN ACID MEDIUM

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • MICHELLE JAKELINE CUNHA REZENDE
  • ADRIANA BARBOSA DA SILVA
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • GLAUCO FAVILLA BAUERFELDT
  • Data: Aug 23, 2022
    Ata de defesa assinada:


  • Show Abstract
  • This thesis work presented the synthesis and evaluation of the anticorrosive activity of b-enaminoesters: unsubstituted and halogenated (Cl, F and Br), characterized by hydrogen and carbon NMR and their infrared organic functions. The evaluation of the anticorrosive activity was through electrochemical techniques of EIE, RPL and PP, being the most efficient the F-EN, presenting 85% of efficiency by EIE. Another technique used was mass loss, where the F-EN also showed greater efficiency with 86% efficiency. The analysis of the metallic surface was also carried out through SEM, which showed that the surface remained more preserved with the presence of the inhibitor. Theoretical calculations corroborated the results found by the experimental techniques. The second group of molecules were the iminochalcones that were synthesized and characterized spectroscopically. The evaluation of the anticorrosive activity of the iminochalcones resulted in 99% in the mass loss technique for the most efficient compound Cl-IM and 97% in the electrochemical EIE technique and, once again, the SEM showed that the metallic surface was better preserved in the presence of of the inhibitor, and the theoretical calculations showed to be correlated with the experimental ones.

9
  • DOUGLAS CHAVES DE ALCÂNTARA PINTO
  • Desing, synthesis and biological evaluation of new quinolinic derivatives against Mycobacterium tuberculosis

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • DANIELA COSENTINO GOMES
  • FERNANDO DE CARVALHO DA SILVA
  • GUSTAVO HENRIQUE GOULART TROSSINI
  • MARCO EDILSON FREIRE DE LIMA
  • SÉRGIO PINHEIRO
  • WANDA PEREIRA ALMEIDA
  • Data: Oct 25, 2022
    Ata de defesa assinada:


  • Show Abstract
  • Tuberculosis (TB) infection caused by the microorganism Mycobacterium tuberculosis, is currently one of the infectious diseases with high mortality potential, due to the emergence of strains resistant to the drugs available for treatment. The disease occurs latently, the infected individual will present the symptoms years later, being able to develop the multidrug-resistant type (TB-MDR, of the multidrug-resistant English) and the extensively resistant type (TB-XDR, of the extensively drug-resistant English) these variations of the disease represent a major challenge for public health authorities. Although the Stop-Tuberculosis plan has shown some promising results, the fact is that in the current scenario the global reduction rates for the treatment of TB-MDR / XDR are below 50%, being even lower when the spectrum of drug resistance goes beyond that of TB-XDR. The reduction in health supplies and financing from international agencies, the long treatment and the high incidence of adverse events make the task of combating tuberculosis even more difficult. After more than 40 years of neglect, more attention has recently been given to the need for new drugs to fight the disease. Several research works have been carried out recently with the objective of improving the treatment for TB-MDR / XDR. These researches seek therapeutic alternatives for the development of effective drugs. Thus, the development of new substances for the treatment of infection is of relevant interest in the scientific community. This project aims to develop and evaluate the cytotoxic potential of new quinolinic derivatives resulting / planned from the structural modification of 2-chloro-quinoline-3-carbaldehyde, giving rise to new nitrogen-containing heterocyclic compounds. Planned due to the performance of computational studies in order to discover the possible molecular interaction sites of the derivatives with the enzyme DNA gyrase, related to cell replication, obtaining information on the mechanisms of action of these new compounds.

2021
Dissertations
1
  • IGOR RESENDES BARBOSA
  • Synthesis, Characterization and Biological Evaluation of Aryl-Sydnones and New Sulfonamide-Sydnone Hybrids

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • ROSANE NORA CASTRO
  • LUIZ CARLOS DA SILVA PINHEIRO
  • ROBERTA KATLEN FUSCO MARRA
  • Data: Jan 26, 2021


  • Show Abstract
  • Leishmaniasis are a group of diseases caused by parasites from the genus Leishmania. They are endemic in about 98 countries and territories and classified by WHO as Neglected Tropical Diseases. They affect thousands of people every year, causing high mortality and morbidity. Treatments for these parasitic infections are based on chemotherapy, with a small number of available drugs, which have several limitations, such as high costs, inconvenient and often painful route of administration and serious adverse effects. In addition the surge of resistance has become an emerging problem, with reported cases for all anti-leishmania substances of clinical use. In view of the very serious scenario created by leishmaniasis and the interest of our research group in mesoionic compounds and their biological activities, this dissertation presents the design and preparation of two series of sydnones with potential leishmanicidal activities: the first, composed of 13 simple N-aryl-sydnones and N-alkyl-sydnones (wich have already been reported in the literature), and the second, consisting of 8 novel sulfonamide sidnona hybrids. The first series of Sydnones was prepared in three steps, using the classic synthetic route widely described in the literature. The hybrids, in turn, were obtained by two additional steps, starting from the N-(4-nitro-phenyl)-sydnone or N-(3-nitro-phenyl)-sydnone. For this, the nitro group of these compounds was initially reduced using stannous chloride, yielding the N-(amino-phenyl)-sydnones. Finally, the sulfonamide-sydnone hybrids were obtained by maceration between the respective N-(amino-phenyl)-sydnones and the appropriate sulfonyl chlorides, in the presence of sodium carbonate and silica gel. The products were characterized by infrared spectroscopy, 1H and 13C NMR. In the case of the novel compounds, two-dimensional NMR experiments (COSY, NOESY, HSQC, HMBC) were also performed to correctly assign all signals observed in the 1D 1H and 13C spectra. This work proposes a viable rout for the preparation of sulfonamide-sidnones and presents a detailed discussion regarding the structural determination of these compounds and their synthetic intermadiates. All thirteen sydnones from the first series were evaluated in vitro against the promastigote form of L.amasonensis.  Os these, only the unsubstituted phenyl-sydone and those containing a nitro group in the benzene ring showed IC50 values below the highest concentration tested (< 128 µM). The N-(3-nitro-phenyl)-sydnone was the most potent compound, with an IC50 of 18.22 µM.

2
  • MARINA WAJSENZON DA FONSECA
  • STUDY OF THE ANTIOXIDANT POTENTIAL OF GREEN PROPOLIS, ARTEPELIN C AND ROSMARINIC ACID ON MITOCHONDRIAL FUNCTIONALITY IN Saccharomyces cerevisiae CELLS

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • CARMELITA GOMES DA SILVA
  • ELIS CRISTINA ARAÚJO ELEUTHERIO
  • ARTHUR EUGEN KUMMERLE
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • CRISTIANO JORGE RIGER
  • Data: Jan 28, 2021


  • Show Abstract
  • Propolis is a complex mixture of resinous, gummy and balsamic substances collected by honey bees from any part of the plant tissue, to which bees add salivary secretions, wax and pollen to the final product. Due to the great diversity of Brazilian plant species visited by bees, there is a high variation in the constituent substances of propolis, consequently of their active principles and their coloring. The main vegetable source for the production of propolis from the Southeast region of Brazil is the resin collected from young buds and leaves of Baccharis dracunculifolia L., popularly known as field rosemary. This plant native to Brazil provides high levels of different phenolic substances, such as artepillin C, which is considered a chemical marker for this type of propolis. Flavonoids and phenolic acids are substances derived from the secondary metabolism of plants and correspond to approximately 50% of the constituents of propolis, but this percentage may vary according to the region of product collection. The antioxidant properties of this substance may be associated with phenolic constituents present in its extracts, such as rosmarinic acid and artepelin C. Oxidative stress is related to cardiovascular problems, carcinogenesis and neurodegenerative damage. Reactive oxygen species are generated during cellular respiration leaving mitochondrial DNA vulnerable due to its proximity to the electron transport chain. The mitochondria has some fundamental functions in our organism: cellular respiration, through the electron transport chain; the synthesis of adenosine triphosphate (ATP); the mediation of programmed cell death (apoptosis); and the production of heat; besides having its own DNA (mtDNA). The yeast Saccharomyces cerevisiae is used in experiments as a biological model because it has a cellular organization similar to other eukaryotic cells; its genome fully sequenced; easily grown; low cost. In addition to being optional anaerobics and a model organism for understanding the molecular mechanism of mitochondrial diseases. The objective of this work is to evaluate the antioxidant potential of extracts of green propolis and two of its constituents on mitochondrial activity in S. cerevisiae cells. The results revealed that the treatments, artepillin C, rosmarinic acid and the ethanolic and hexanic extracts, both in the concentration 50 µg.mL-1 , showed a good antioxidant potential, as they were able to decrease lipid peroxidation and increase cell viability in fermentative and non-fermentative medium. The ethanolic extract of green propolis in 50 µg.mL-1 was the only one to contribute positively to the electron transport chain, increasing oxygen consumption during maximum breathing.

3
  • LUCAS CARUSO ARAUJO BEZERRA
  • Design, Synthesis and Biological Evaluation of New Chalcones as Potential Anti-Prion Agents

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CEDRIC STEPHAN GRAEBIN
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • ROSANE NORA CASTRO
  • VAGNER DANTAS PINHO
  • Data: Feb 26, 2021


  • Show Abstract
  • The diseases related to protein misfolding are part of a group of debilitating, degenerative,
    progressive, fatal and still intractable neurological disorders. In prion disease, a normal prion
    protein (PrP
    C) is converted to infectious isoforms (PrPSc) rich in β-sheets, with difficulty to be
    degraded by proteases and prone to form aggregated fibrillar responsible for the neurotoxicity
    of the pathogenic isoform. Although many compounds have shown to inhibit the process of
    conversion to PrP
    Sc, until this moment there is no effective therapy for this disorder, since most
    of the substances studied
    in vitro have unfavorable pharmacokinetic profile. This study
    proposes the synthesis of five series (Series A, B, C, D and E) of chalcones, based on the
    J8
    prototype, developed as possible anti-prion compounds capable of acting as a chemical
    chaperone in the conformational stabilization of the non-infecting PrP
    C isoform, preventing the
    formation of PrP
    Sc. The first series (Series A) of compounds was fully synthesized with
    satisfactory yields through Claisen-Schmidt condensation followed by the Buchwald-Hartwig
    cross-coupling reaction. Of the seven chalcones synthesized for series A, four of them presented
    an excellent biological profile, managing to inhibit the interconversion
    in vitro of PrPC in PrPSc
    by up to 80% in the concentration of 10 M, whose values surpassed those obtained for the
    prototype
    J8. Some final compounds from series B, C and E have already been synthesized,
    demonstrating that the synthetic route used is efficient, while the synthetic development of
    series D is interrupted in the second to last key-intermediate. The compounds of all series were
    subjected to
    in silico studies of molecular docking and enabled a better understanding of the
    binding site of the prion protein and the interaction profile between chalcones and PrP
    121-231.
    Molecular docking studies carried out for D series suggest that these are the most promising
    derivatives of all the series, whose binding energy values were better than those found for A
    series chalcones, which already have an excellent pharmacological profile.

4
  • LARISSA DE ALMEIDA PEIXOTO FERREIRA
  • Synthesis and pharmacological evaluation of new 3-(imidazo[1,2-a]pyridine)-coumarins designed for the treatment of Alzheimer's Disease

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CEDRIC STEPHAN GRAEBIN
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • Data: Apr 16, 2021


  • Show Abstract
  • Alzheimer's disease (AD) is a progressive neurodegenerative disease that has a complex pathogenesis, inducing memory loss and cognitive disorders, which usually present in old age. Coumarins and imidazopyridines (IM) are compounds with wide pharmacological activity and have several promising studies related to the treatment of AD acting on several targets such as acetylcholinesterase (AChE), butyrylcholinesterase (BuChE), aggregation of β-amyloid plaques (Aβ) and between others. Thus, the general objective of this work is the synthesis of new 3- (imidazo [1,2-a] pyridin-2-yl) -coumarins, based on classic bioisosterism substitutions of 4- (dimethylamino) phenyl by imidazopyridines (IM) as possible cholinesterase inhibitors for possible treatment of AD. The first series is the synthesis of 3- (imidazo [1,2-a] pyridines) -coumarins (66a-d) involving 5 reaction steps. Through the synthesis of 3-acetyl-coumarins (67a-c) (70% to 90% yield) (step 1), α-bromination of 3-acetyl-coumarins (51 to 73% yield) (step 2) , formation of the IM nucleus (64 to 69% yield)(step 3), alkylation of the IMs with a conversion factor of 74% (66a) and 81% (66b) (step 4) and, finally, the amination step with the formation of the final compounds (66a-b). The second series is the synthesis of 3- (imidazo [1,2-a] pyridines-9'-ethylcarboxylate) -coumarins, involving Knoevenagel condensation to form compounds with coumarin nucleus (89) (86% yield) ( 1 step), o-alkylation (93a-d) (yields from 30 to 74%), forming the nuclei of the IMs (102a-d) (yields from 42 to 74%) and amination (103a-d) (yields from 31% to 79%). The compounds obtained were purified and then characterized by spectroscopic techniques (1H and 13C NMR). An initial screening was carried out at a fixed concentration of 30 μM, for two final compounds 66b and 103b, obtained initially by the non-optimized synthetic route, with an enzymatic inhibition of approximately 91.7% (AChE) / 92.4% (BuChE) and 98.1% (AChE) / 88.6% (BuChE), respectively. In addition to the activity, silicon studies of molecular modeling and ADME parameters were carried out. Based on these preliminary results, new compounds are being synthesized, and the IC50 and enzymatic kinetics against cholinesterases will be determined.

5
  • AFONSO SANTINE MAGALHÃES MESQUITA VELEZ
  • DESIGN AND SYNTHESIS OF NEW 1,2,4-TRIAZOL-3-THIOALKYL-NITROIMIDAZOLIC HYBRIDS WITH SELECTIVE TOXICITY AGAINST TRYPANOSOMA CRUZI AMASTIGOTES

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • GUSTAVO HENRIQUE GOULART TROSSINI
  • ARTHUR EUGEN KUMMERLE
  • FERNANDO DE CARVALHO DA SILVA
  • MARCO EDILSON FREIRE DE LIMA
  • THIAGO MORENO LOPES E SOUZA
  • Data: May 27, 2021


  • Show Abstract
  • Chagas disease (CD) is one of the main neglected tropical diseases. CD is endemic in rural areas of developing countries in South and Central America, and to date it has no effective treatment. Facing the huge demand for the development of new compounds with therapeutic potential to treat neglected tropical diseases, this work aims to contribute to the study of the development of new drugs with potential antiparasitic activity. Our approach involved the application of the molecular hybridization strategy, using a 1,2,4-triazolic-3-thione derivative (with antiparasitic activity previously described by our group). This triazolic derivative was prepared from the natural amide piperine, the main chemical component of nuts of Piper nigrum, accessible natural product and easy isolation. The molecular planning carried out herein involved the hybridization of the triazolic derivative of piperine with different nitroimidazole cores (which stand out as important pharmacophores for the intended antiparasitic activity). The application of this molecular modification strategy, added to the other methodologies developed in this work, allowed the preparation of six new hybrids, which showed a very promising and selective activity against Trypanossoma cruzi amastigotes (Tulahuen strain, C2C4 LacZ).

     

6
  • VINÍCIUS NUNES DA ROCHA
  • Multireactional Multiconformational Vinyl Ethyl Ether + OH Reaction Theoretical Study.

  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • ELIZETE VENTURA DO MONTE
  • GLAUCO FAVILLA BAUERFELDT
  • GUSTAVO BEZERRA DA SILVA
  • Data: Aug 30, 2021


  • Show Abstract
  • Aliphatic ethers have been indicated as a possibility as fuels addictive, with potential to reformulate the energetic matrix. This molecule family has relevancy as much in Atmospheric Chemistry as Combustion Chemistry, and learn its reactivity is important to elucidate its behavior and modulate a precise reactional mechanism. The combustion
    mechanism starts by unimolecular and bimolecular reactions with OH radicals, following a hydrogen abstraction mechanism. In a similar way, at an atmospheric system, OH radicals are the mainly precursors of these ethers oxidate processes, by hydrogen abstraction mechanisms. This study, as a continuation of previous works, has focus on elucidate the EVE + OH reaction on purpose to observe the interaction of these radicals with more complex structure of the previous studied ether, now with the possibility of addiction channels besides hydrogen abstraction channels. The theoretical calculations have been realized with M06-2x level and aug-cc-pVTZ basis utilizing ORCA software. In comparison with the literature, this work brings a more detailed approach to the theoretical study. By a conformational analysis together with a Boltzmann’s distribution, 4 conformations have been confirmed relevant to the reaction mechanism, its respective intermediates geometries and its correspondents saddle points, that shown similarities of
    extreme importance to the prediction of the reaction mechanism. Its connectivity was confirmed by Intrinsic Reaction Coordinate (IRC) and Scan calculations. Those calculations allowed the proposal of new reaction channels, showing multiple possibilities, setting then a multiconformational multireactional study.

7
  • RODRIGO DE PAULO OSORIO
  • Analysis of the relationship between the antioxidant potential of ferulic and p-coumaric acids and the catalase enzyme from Saccharomyces cerevisiae.

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • CRISTIANO JORGE RIGER
  • ARTHUR EUGEN KUMMERLE
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • JOELMA FREIRE DE MESQUITA
  • CARMELITA GOMES DA SILVA
  • Data: Sep 28, 2021


  • Show Abstract
  • Oxidative stress is a condition generated by the inability of the antioxidant defense system to control the action of oxidants in cells, which can react with lipids, proteins and DNA, damaging the properties of cells structures. Oxidative stress has been associated with several pathologies, such as neurodegenerative diseases, diabetes and cancer. Ferulic and p-coumaric acids are exogenous antioxidants related to positive effects against neurodegenerative diseases. However, it is important to understand better the action mechanisms of these compounds. Thus, cell viability, catalase activity, antioxidant activity and molecular modeling experiments were carried out in order to analyze the relationship between the antioxidant potential of ferulic and p-coumaric acids and the catalase enzyme from Saccharomyces cerevisiae. Both acids did not show toxicity at the concentration of 10 µg.mL-1 for cells. The analysis of the effect of these acids on catalase activity under different concentrations of hydrogen peroxide (0,0 mM, 0,5 mM and 2,5 mM) revealed catalase activity of 77,76% and 53,63%; 127,52% and 104,39%; and 83,67% and 70,61% for ferulic and p-coumaric acids in relation to the negative control, respectively. Regarding the antioxidant potential, pretreatment with acids showed an increase in cell viability after oxidative stress with hydrogen peroxide (2,0 mM). These results were observed in the BY4741 control (greater than 20% increase) and the catalase deficient Δctt1 strain mutant (greater than 25% increase). Analyzing by molecular docking (GOLD), it was found that possibly the amino acid residues Val111, Pro124, Phe148, Phe149 and Phe159 are important for the interactions of both phenolic acids with the enzyme. By allowing the flexibility of the side chains with amino acid residues Val111, Phe148, Phe149, Phe156, Phe159 and Ile160, the scores for phenolic acids are high, with an emphasis on the side chain of residue Phe159. In conclusion, ferulic acid and p-coumaric acid provide cellular protection against oxidative stress and this protection is apparently unrelated to their direct effect on catalase.

8
  • VITORIA DE SOUZA FERNANDES DA SILVA
  • Design, synthesis and evaluation of the potential antiparasitic activity of dihydropyrimidinones and quinazolines obtained from Multicomponent Reactions

  • Advisor : CEDRIC STEPHAN GRAEBIN
  • COMMITTEE MEMBERS :
  • CEDRIC STEPHAN GRAEBIN
  • CLAUDIO EDUARDO RODRIGUES DOS SANTOS
  • JONES LIMBERGER
  • RENATA BARBOSA LACERDA
  • ROBERTA KATLEN FUSCO MARRA
  • Data: Oct 7, 2021


  • Show Abstract
  • Malaria is an infectious and potentially fatal disease caused by protozoa of the
    Plasmodium genus, its main vector of transmission is the bite of the female Anopheles
    mosquito. Despite being considered one of the diseases with the greatest impact on
    morbidity and mortality in countries located in the tropical and subtropical regions of the
    planet, there are still not many treatment alternatives that use effective drugs, with low
    toxicity and that did not present cases of resistance. Multicomponent reactions (MCR)
    are a powerful tool in the search for new drug candidates due to their display of
    advantages compared to conventional linear syntheses, and for following principles of
    Green Chemistry. Dihydropyrimidinones (DHPMs), products of Biginelli's MCR, are N-
    heterocyclic systems that have several pharmacological properties and an easily
    reproducible synthetic route, enabling the production of a library of structurally distinct
    molecules that can exhibit bioactivity or be modified for this purpose. In this work,
    twenty-two DHMPs and nine Quinazolinones were synthesized, five of which were new,
    through the use of functionalized derivatives in Biginelli's RMC, allowing the creation of
    a library of molecules with different structures and possible antimalarial activity. The
    methodology used proved to be effective and simple, allowing the use of readily
    commercially accessible reagents, which allowed the synthesis of different compounds
    with yields ranging from 15 to 88%. Tests to verify the potential biological activity of the
    products obtained are in progress.

9
  • RAYSSA VICENTE NASCIMENTO
  • Study of Varronia curassavica (Boraginaceae) in the Rio de Janeiro Mata Atlantica Fragments, Based on the Essential Oils Chemical Profile

  • Advisor : MARCO ANDRE ALVES DE SOUZA
  • COMMITTEE MEMBERS :
  • SUZANA GUIMARÃES LEITÃO
  • ANDRE MARQUES DOS SANTOS
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • MARCO ANDRE ALVES DE SOUZA
  • MARCUS VINICIUS LOSS SPERANDIO
  • Data: Dec 7, 2021


  • Show Abstract
  • Wild-sage (Varronia curassavica Jaqc) is a native species that occurs in the Mata Atlantica region, it is present in the National List of Medicinal Plants of Interest to the Unified Health System (RENISUS, Brazil) and studies have pointed to the pharmacological effects related to essential oil substances extracted from the leaves. The plant's pharmacological action is mainly due to the presence of α-humulene and β-caryophyllene sesquiterpenes, which have proven anti-inflammatory, analgesic and anti-allergic properties. There are no reviews of wild-sage focused on the chemical variability of essential oils, as well as, few studies evaluating the chemical diversity of the species in its natural environment or in collections. This dissertation was divided into two chapters. In the first, a literature review, descriptive and multivariate statistical analysis on the essential oils of the wild-sage herb were carried out, based on a sampling of scientific articles available on the internet. In the second chapter, a field study was carried out from the prospection and collection of the wild-sage plant material in its natural habitat (in situ) in the Região dos Lagos in the Rio de Janeiro State, essential oil extractions and chemical characterizations and analysis statistics of the data obtained. With the information obtained in this work, it was possible to know the genotypes wild-sage chemical variability and productive potential in situ. This information is important for the specialist in plant improvement and the breeding program development, focused on the essential oils productions.

10
  • GABRIELA XAVIER ROCHA
  • SYNTHESIS AND EVALUATION OF ANTIFUNGAL ACTIVITY OF ISATIN-THIOSSEMICARBAZONES

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • MARIA APARECIDA MEDEIROS MACIEL
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • MARCO EDILSON FREIRE DE LIMA
  • Data: Dec 21, 2021


  • Show Abstract
  • Hybrid compounds such as isatin-thiosemicarbazones are found in the literature as substances with great biological potential, such as antibacterial, antitumor, antifungal, among others. However, there are several procedures by which isatin and thiosemicarbazones are combined to synthesize the desired hybrid products. In this work, 18 (eighteen) precursors 4-X-phenyl-thiosemicarbazones and 3-X-phenyl-thiosemicarbazones with different substituents on the aromatic ring were synthesized, where X =H, Cl, Br, F, OCH3, N(CH3)2, OH, CF3, CH3, NO2. Subsequently, 18 (eighteen) new hybrid derivatives were obtained through the reaction of these thiosemicarbazones with isatin. All compounds were properly characterized through routine spectroscopic techniques, the thiosemicarbazones only with IR, as their structures are described in the literature, and the final products were unpublished through the techniques of IR, 1H and 13C NMR. Isatin-thiosemicarbazones were tested for antifungal activity, using the Radial Growth techniques with Aspergillus parasiticus and Minimum Inhibitory Growth (MIC) with Sporothrix schenkii, showing very satisfactory results. The investigation of the structure-activity correlation was carried out using data from the electronic and hydrophobic effects of the synthesized molecules. Finally, the final products were investigated for their chelating effect with iron (II) ions.

11
  • GABRIEL MARTINS VIEGAS
  • Spectrophotometric determination of antimony in samples of rifle bullets

  • Advisor : JOSE GERALDO ROCHA JUNIOR
  • COMMITTEE MEMBERS :
  • CARLOS EDUARDO RODRIGUES DE PAULA
  • FLAVIO COUTO CORDEIRO
  • JOSE GERALDO ROCHA JUNIOR
  • OTAVIO RAYMUNDO LA
  • VIVIANE GOMES TEIXEIRA
  • Data: Dec 22, 2021
    Ata de defesa assinada:


  • Show Abstract
  • The analysis of the chemical composition of projectiles found at the scene of a crime is a useful tool to obtain information that aids in the investigation of cases involving rifle shooting, in which the integrity of the fired projectile is not preserved, and ballistic confrontation cannot be used. Antimony is normally present in rifle projectiles and has stood out as one of the key elements for their classification. The work proposes a methodology for the dissolution of rifle bullet samples for the determination of antimony by spectrophotometry, with the aim of using this result in the differentiation of these bullets, according to the manufacturers. The proposed method was used in the analysis of projectiles from three manufacturers, provided by the Civil Police of the State of Rio de Janeiro, and involved the dissolution of samples in HNO3 8 mol L-1, at 150 °C. The lead ion was removed from the solution, as it interferes with the determination, through its precipitation as PbSO4 and, later, centrifugation. The spectrophotometric determination of antimony was based on the formation of the tetraiodoantimonate(III) complex (λ = 425 nm) after the addition of a potassium iodide solution in an acidic medium and proved to be adequate for the analysis of the projectiles. The analytical curve showed excellent linearity (R² = 0.9998) and the detection limits (1.05 ± 0.02 mg L-1) and quantification (3.49 ± 0.04 mg L-1) obtained were adequate, as the solutions produced by dissolving the samples presented a concentration (20 mg L-1) well above these limits. The study of the absorbance of the antimony solutions produced by the proposed dissolution method, as well as the accuracy of the method, determined by the recovery studies, between 99.022 ± 0.003% and 109.719 ± 0.005%, were satisfactory, as they indicate that during the dissolution of the samples and PbSO4 precipitation, there was no appreciable loss of antimony by volatilization or co-precipitation, respectively. ANOVA and Tukey's test was used to discriminate the projectiles by the manufacturer. By analyzing the fragments of the projectiles, it was possible to discriminate only one of the projectile manufacturers (CBC 7.62x51mm) from the others (Winchester .308, CBC .308) by its Sb content. When comparing projectiles from the same manufacturer, a significant difference was observed between the projectiles produced by only one of them (Winchester .308). No significant differences were observed in the Sb contents when analyzing the different sections of the same projectile, indicating that the Sb distribution is relatively homogeneous (considering the sample size and the number of replicates taken for the analysis), an interesting fact, as This method is intended for analyzing rifle bullets that, when found at crime scenes, are fragmented, or deformed. However, when comparing the manufacturers choosing specific sections of the projectiles, it was noticed that the sections at the ends of the projectiles presented a potential for the differentiation of the manufacturers, having differentiated the manufacturer's Winchester .308 e CBC 7.62x51mm.

Thesis
1
  • PAULA DO NASCIMENTO GOULART
  • Acylguanidines and guanidines analogous to bromopyrrolic alkaloids, designed as selective butyrylcholinesterase inhibitors

  • Advisor : RENATA BARBOSA LACERDA
  • COMMITTEE MEMBERS :
  • NELILMA CORREIA ROMEIRO
  • LUZINEIDE WANDERLEY TINOCO
  • CEDRIC STEPHAN GRAEBIN
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • Data: Apr 29, 2021


  • Show Abstract
  • Natural products are one of the main sources of inspiration for development of new drug
    prototypes candidates. Among products of natural origin, bromopyrrolic alkaloids are of
    great interest to medicinal chemists because they are a class of exclusively marine
    secondary metabolites, produced by sponges, and with diverse biological activities. The
    present work describes design, synthesis and evaluation,
    in vitro and in silico, of new
    guanidines and acylguanidines bromopyrrole derivatives designed as structural analogues
    of oroidine marine alkaloids. Structural planning was based on strategies such as
    bioisosterism, molecular hybridization and homologation for planning changes in the
    characteristic subunits of these alkaloids, such as the spacer alkyl chain and the cyclic
    guanidine subunit. Synthetic strategy explored the condensation reaction between the key
    intermediate 1-(
    tert-butyloxycarbonyl)-3-(4,5-dibromopyrrol-2-carbonyl)-2-methyl-2-
    isothiourea with different amines and subsequent removal of the protection group (
    NBoc) in acid medium to obtain the target acylguanidines. The acyclic guanidinic analogs
    were obtained by the reaction between the intermediate 2-trichloroacetyl-4,5-
    dibromopyrrole, or 2-trichloroacetyl-pyrrole, and previously synthesized
    N,N'-bisprotected amino-alkylguanidines, and subsequent deprotection reaction in acidic medium.
    We synthesized 32 original compounds (
    68a-c; 69a-c; 50a-f; 62a-h; 62g'; 62h'; 51a-h;
    51g'; 51h') in good yields, among guanidines and acylguanidines (protected and
    unprotected), which are synthetic analogs of oroidinic marine alkaloids, all characterized
    by
    1H NMR and 13C NMR. In vitro screening for acetylcholinesterase (AChE) and
    butyrylcholinesterase (BuChE) inhibition, identified guanidine
    68c as a non-selective
    inhibitor of AChE (CI
    50 of 22.8µM) and BuChE (CI50 of 27.3 µM) and 50c as a selective
    inhibitor of BuChE (IC
    50 of 13.3 µM). Acylguanidines stood out as selective BuChE
    inhibitors, mainly free acylguanidines
    51a and 51g with IC50 of 4.8 µM and 3.8 µM,
    respectively, and
    52c, 52d and 52f with BuChE inhibition greater than 83% at 30 µM.
    Structure-activity relationship showed the importance of free acylguanidine function for
    selective inhibition of BuChE, as well as the presence of bromine substituents in pyrrole
    ring. The molecular docking studies corroborated by showing the importance of
    bromopyrrole, acylguanidine and benzyl ring subunits for interaction with the amino acid
    residues in BuChE active site. Additionally,
    in silico evaluation of ADME and druglike
    properties showed that new bromopyrrole guanidines and acylguanidines have the
    potential for good gastrointestinal absorption and good drug-likeness properties.


2
  • EDLENE RIBEIRO PRUDÊNCIO DE SOUZA
  • EVALUATION OF THE CONTRIBUTION OF BANANA SEIVA (Musa sp) IN HEALING PROCESSES

  • Advisor : CRISTIANO JORGE RIGER
  • COMMITTEE MEMBERS :
  • ANDRE FIORAVANTE GUERRA
  • ARTHUR EUGEN KUMMERLE
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • CRISTIANO JORGE RIGER
  • ROSA HELENA LUCHESE
  • TIAGO FLEMING OUTEIRO
  • YRAIMA CORDEIRO
  • Data: Apr 30, 2021


  • Show Abstract
  • Healing can be understood as a set of processes that begin immediately after the occurrence of an injury, in a perfect and coordinated cascade of cellular, molecular and biochemical events that interact for the epithelial reconstitution to occur. In popular culture, various parts of banana are used for medicinal purposes associated with healing: fruit peels, leaves and fruit are used in the treatment of external wounds and stomach ulcers. Although the cicatrizant activity of banana extracts has been proven in several studies, the chemical composition of the banana sap is not clearly established; nor are the properties of this fraction of the plant investigated. The objective of this work is to evaluate the phenolic profile of banana sap and to investigate activities that may influence the cicatrization process, such as coagulant action and potential antimicrobial and anti-inflammatory action.

3
  • EMANOEL HOTTES
  • Application of Lamellar Double Hydroxides on the adsorption and slow liberation of glyphosate herbicide in an aqueous medium

     

  • Advisor : MARCELO HAWRYLAK HERBST
  • COMMITTEE MEMBERS :
  • JAQUELINE DIAS SENRA
  • ANDRE MARQUES DOS SANTOS
  • ANDRES CALDERIN GARCIA
  • JUSSARA LOPES DE MIRANDA
  • MARCELO HAWRYLAK HERBST
  • RENATA NUNES OLIVEIRA
  • ROSANE AGUIAR DA SILVA SANGIL
  • Data: Aug 5, 2021


  • Show Abstract
  • The widespread use of pesticides in agriculture has contributed significantly to the increase of environmental contamination. In Brazil, where glyphosate (GPS) responds to the majority of the herbicide consumption, GPS is associated to the contamination of soil and hydric bodies. The Layered Double Hydroxides (LDHs), materials of the anionic clay family, present a high capacity of anions intercalation and they can be used in different segments, such as in the adsorption process and slow release of chemical compounds. Therefore, the aim of this paper was to study the adsorption of the glyphosate pesticide, using calcined LDHs – the so-called Layered Double Oxydes (LDOs) and their process of release by the hybrid material. The studies of glyphosate adsorption in pH 10, using LDO in the proportion 2:1 de Mg/Al, indicated that the process follows a pseudo first-order kinetic, being the Langmuir isotherm model the one that best presented adjustment when compared to the Freundlich and Temkin models. The negative values of ΔG° and positive ΔS° indicate the spontaneity of the adsorptive process. The glyphosate/adsorption interaction mechanism was studied through the powder XRD, ATR-FTIR and NMR of solid 13C and 31P. The 7,4 Å value obtained to the interlamellar spacing suggests that the adsorption does not involve the intercalation of glyphosate, but it does for the hydroxide anion. The band shift in ATR-FTIR, from carboxylate and phosphate portions, to lower numbers of wave on the hybrid compound face the non-adsorbed glyphosate, indicates that these groups are involved in the interaction process of glyphosate/layered of the LDH. As of the 13C {1H} CP-MAS and 31P{1H} CP-MAS spectra, it was possible to infer that the glyphosate is possibly found complexed to the present metals in the LDH lamellas. The study of anionic competition indicates that the increase on the carbonate concentration leads to a significant reduction on the glyphosate adsorption, reaching up to less than 15% when the carbonate concentration is 200 μg/mL. For the release studies, LDHs were synthesized on the Mg-Al-glyphosate system (metallic reason 2:1) by the direct co-precipitation method, followed by reflux and by the reconstruction method, followed by the hydrothermal treatment. The analysis of powder XRD of hybrid compounds suggested that the synthesized material by reconstruction presents a less amorphous character than the one synthesized by co-precipitation and the basal spacing value of 7,8 Å is an indication of interspersed glyphosates on the vertical position. The analysis of ATR-FTIR and NMR of hybrid compounds indicated that the glyphosate interacts with the layered through the carboxylate and phosphate groups, as in the adsorption. To a 48 hour contact time, the glyphosate release was more effective to the pH values equal to 8 and 10, being superior to 70%. To the acid pH 6 and 4, the values were inferior to 60%. A comparative analysis of the glyphosate release face to solutions of nitrate anions, carbonate and chloride, all of them in the concentration of 5 x 10-3 M, indicated that more than 60% of the present glyphosate on the hybrid compound was released after 15 hours when in presence of carbonate. In the solution of the other anions, the release did not exceed 35% on the same period of time. It was observed that, in an aqueous medium, the glyphosate release is directly proportional to the carbonate concentration.

4
  • THAIS PAES FERREIRA
  • Determination of fipronil and fipronil-sulfone in surface waters of the Guandu river basin by high performance liquid chromatography with mass spectrometry. 

  • Advisor : YARA PELUSO CID
  • COMMITTEE MEMBERS :
  • ANDRÉ LUÍS MAZZEI ALBERT
  • ALEXANDRE LIOI NASCENTES
  • MÔNICA COSTA PADILHA
  • ROSANE NORA CASTRO
  • YARA PELUSO CID
  • Data: Oct 8, 2021
    Ata de defesa assinada:


  • Show Abstract
  • Fipronil (FIP) is a broad-spectrum insecticide used in the industrial, residential and agricultural sectors, which poses environmental and human health risks. FIP and its degradation products have been found in a variety of environmental matrices, with fipronil-sulfone (FIP-S) being one of the most commonly found degradation products. In several countries studies have reported the presence of fipronil in aquatic environments. However, its occurrence in surface water in Brazil is limited. Within this context, the objective of this work was to validate an analytical method using solid phase extraction (SPE) and liquid chromatography coupled to mass spectrometry (LC-MS) capable of evaluating the presence of fipronil and fipronil-sulfone in surface water. The method was validated according to INMETRO and USEPA. The proposed method was applied to analyze 16 samples collected during summer and autumn 2020 at sampling points of the Guandu River Basin in Rio de Janeiro State. FIP was the main analyte found in the evaluated samples, with concentrations in the range of 0.132 – 2.44 μg/L. FIP-S was quantified only in one sample (0.135 μg/L), but it was possible to detect the presence of this analyte in most samples. A higher concentration of FIP in surface water was observed in autumn (2.44 μg/L) compared to summer. This is the first study of the occurrence of FIP and FIP-S in the Guandu River Basin. The values are high enough to warrant monitoring studies in a region of great importance for the city of Rio de Janeiro and indicate the need to include this pesticide and its derivatives in water quality legislation.

5
  • LARISSA HENRIQUES EVANGELISTA CASTRO
  • Development of piperine-derived triazoles inhibitors of Trypanosoma cruzi CYP51: Optimization of a model to predict theoretical activity, synthesis and in vitro activity

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • DANIEL ALENCAR RODRIGUES
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • CEDRIC STEPHAN GRAEBIN
  • GUSTAVO HENRIQUE GOULART TROSSINI
  • Data: Dec 16, 2021
    Ata de defesa assinada:


  • Show Abstract
  • Chagas disease (CD) is a neglected tropical disease caused by the parasite Trypanosoma cruzi and presents millions of cases in several countries. Currently there are no vaccines for CD prevention and there are only two drugs for its treatment, but in Brazil, only benzonidazole is used and is ineffective on disease’s chronic phase. Thus, research for new drugs becomes essential. The enzyme sterol 14α-desmethylase (CYP51) belongs to the ergosterol biosynthesis pathway, which are fundamental for the integrity of the T. cruzi’s cell membrane. Its inhibition causes the parasite’s death and it can be promoted by the coordination of heterocyclic compounds with the iron atom of the enzyme’s heme group. On a previous work, a theoretical model of activity prediction for new inhibitors of CYP51 (T. cruzi), based on experimental and theoretical parameters calculated by molecular modeling, which was used for design new triazole piperine derivatives. On this current work, the original theoretical model was optimized using the semi-empirical PM7 method instead of PM6 and a selectivity study was done by molecular docking of heterocyclic compounds in T. cruzi’s CYP51 and H. sapiens’s CYP51. The most promising compounds, planned by the original model, were synthesized, evaluated in vitro against T. cruzi and they were tested for CYP51 inhibition. The new model presented a multiple correlation coefficient (r² = 0.86) slightly higher than the original (r² = 0.83). The docking study indicates a likely selectivity of the compounds for the parasite’s enzyme. The compounds showed activities against trypomastigote forms with IC50 between 6.13 µM (B2) and 27.59 µM (B11), in agreement with the general predictions made by the model, and low cytotoxicity in primate cells (between IC50 = 15.75 and >50 µM). Preliminary enzyme inhibition assays indicated that the compounds designed with the model are in fact capable of inhibiting the parasite's CYP51.  

6
  • MARCELA DE SOUZA ALVES
  • Lemongrass essential oil: an agroecological approach to protect stored grains and seeds against cowpea weevil

  • Advisor : MARCO ANDRE ALVES DE SOUZA
  • COMMITTEE MEMBERS :
  • MARCO ANDRE ALVES DE SOUZA
  • ANDRE MARQUES DOS SANTOS
  • DANIELA COSENTINO GOMES
  • ELEN DE LIMA AGUIAR MENEZES
  • Flavio Jose da Silva Dantas
  • Petter Franco Entringer
  • Antônia Elenir Amâncio Oliveira
  • Data: Dec 21, 2021


  • Show Abstract
  • The main cause of postharvest economic losses of cowpea (Vigna unguiculata (L.) Walp) is due to infestation by the weevil, the Callosobruchus maculatus insect pest. Numerous studies point to essential oils as promising in the insect pest control, including lemongrass essential oil, which inhibits the reproductive cycle and aspects of the weevil metabolism, indicating the biotechnological potential of this bioactive.In this context, one of the objectives of this work was to evaluate the fumigant effect of lemongrass essential and the major substance (citral) on the reproductive cycle and the likely metabolic targets of these bioactives. For this purpose, an experimental design was developed that allowed to evaluate the essential oil and citral effect, in different concentrations, on mortality, egg laying and the new adult’s emergence, as well as to evaluate the metabolic profile and genes expression of enzymes involved in the energy metabolism of insects subjected to essential oil in a time and concentration of low lethality. As an unfolding of the essential oil's insecticidal activity, the other objective was to evaluate a possible agroecological strategy for the cowpea seeds protection. For this purpose, an experimental design was proposed that would enable the evaluation of how long the cowpea seeds coated with lemongrass essential oil would be protected against weevil. Furthermore, the essential oil toxic effect on opportunistic fungi, the seed viability based on a germination test and the toxicity of lemongrass essential oil against Saccharomyces cerevisiae yeast cells were evaluated. To support the studies, the lemongrass essential oil chemical characterization was previously performed, and the seeds coated with the same essential oil were periodically washed for up to 180 days of storage, to assess the presence of essential oil substances in the seeds (residue).Among the main results, there was a low toxic effect by fumigation of the essential oil on insect mortality, but high inhibition of egg laying and the new adult’s emergence. A predominance of energy reserves, based mainly on sugars (trehalose and glucose) and amino acids (proline and alanine), in control insects was observed, although, in the insects subjected to the fumigating effect of essential oil, were observed increased levels of glycerol and decreased relative expression of hexokinase, lactate dehydrogenase and malate dehydrogenase.It was found that cowpea seeds coated with lemongrass essential oil did have citral residues on their surface and provide relative protection against weevils for up to 90 days of storage. A toxic effect of the essential oil on the growth of Fusarium spp., Colletotrichum spp., Aspergillus spp., Penicillium spp and on S. cerevisiae yeast cells was observed. There was no effect of the essential oil on the cowpea seeds germination. Based on the tests carried out, it is concluded that the lemongrass essential oil has the potential to develop strategies to protect grains and seeds in replacement of traditional control, mainly in service to the organic seed production sector.

2020
Dissertations
1
  • MARINA BRANDÃO DA FONSECA
  • Optimization of the prototype LDQMC-014: an acridinone inhibitor
    of Tubulin polymerization.

  • Advisor : CEDRIC STEPHAN GRAEBIN
  • COMMITTEE MEMBERS :
  • JONES LIMBERGER
  • ARTHUR EUGEN KUMMERLE
  • CEDRIC STEPHAN GRAEBIN
  • RENATA BARBOSA LACERDA
  • VITOR SUETH SANTIAGO
  • Data: Jan 28, 2020


  • Show Abstract
  • lethal, and its triple negative subtype has the highest mortality rate. There is no specific treatment
    for the triple negative subtype, and the high rates of disease recurrence and metastasis make it
    necessary to search for new forms of treatment. A multicomponent reaction is a type of reaction
    for chemical synthesis, where three or more reagents react to form a single product with a high
    degree of chemical diversity, and the Hantzsch reaction is one of the first reactions of this type
    reported. In the present work, a series of molecules were synthesized, based on the Hantzsch
    reaction, and similar in structure to natural products such as Colchicine and Podophyllotoxin
    (which have proven antiproliferative activities), which aim to be an optimization of the prototype
    LDQMC-014 (7-(3,4,5-trimethoxyphenyl)-9,10,11,12-tetrahydrobenzo[c]acridin-8(7H)-one),
    the results of which in previous work demonstrate good cytotoxic activity in vitro, having a
    satisfactory tubulin polymerization inhibition profile (widely validated target as anticancer).
    Varied yields were obtained with confirmation oh the structure by carbon and hydrogen NMR.
    Since LDQMC-014 obtained satisfactory results, it was sought to optimize the synthesis results.
    Systematic changes were made in the synthesis parameters, which promoted an increase of more
    than 78 % in the reaction yield. The enantiomers of LDQMC-014 were separated by chiral
    chromatography, which provided good enantiomeric separation, which subsequently allowed
    the determination of the absolute configuration of the asymmetric center present by circular
    dichroism. Once the enantiomers were isolated, their biological evaluations were performed in
    order to determine their activity, as well as a molecular modeling study to predict the interaction
    of the isolated enantiomers with the Tubulin protein. That enantiomers interact differently with
    the protein in both the in silico and the in vitro tests. The molecular modeling study was extended
    to all intended acridinones to predict a possible interaction with the Tubulin protein. A cell
    migration test (Wound Healing) was performed for some of the obtained acridinones, which
    determined the inhibition profile of cell migration, a desired characteristic in metastasis cases.

2
  • NATHALIA FONSECA NADUR
  • Synthesis and Pharmacological Evaluation of New 3-(1,2,3-triazole)-coumarines Designed for the Treatment of Alzheimer's Disease

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CEDRIC STEPHAN GRAEBIN
  • RENATA BARBOSA LACERDA
  • DAVID RODRIGUES DA ROCHA
  • LEANDRO SOTER DE MARIZ E MIRANDA
  • Data: Feb 5, 2020


  • Show Abstract
  • Alzheimer's disease (AD) is characterized as a progressive and irreversible neurodegenerative disorder of memory and other cognitive functions, affecting occupational and social functioning. The use of hybrid compounds with potential inhibitor for more than one target, such as the enzyme acetylcholinesterase (AChE) and the aggregation of β-Amyloid plaques (Aβ), has been shown to be of great value for the treatment of AD due to the possibility of inhibiting AD. simultaneously targets that contribute to the onset and maintenance of the disease. AChE acts to control the levels of the neurotransmitter acetylcholine (ACh) in the synaptic cleft, which is involved in learning and memory processes. Aggregation of Aβ plaques is a major cause of neuronal death. Recent studies have demonstrated the alkyamino-indanone nucleus (19; 20) as a potential inhibitor of AChE enzyme and Aβ plaque aggregation with IC50 values of 14.8 and 16.5nM inhibition against AChE and percentages of inhibition of AChE aggregation. Aβ plates of 85.5% and 83.3% at 20µM, respectively. These results inspired the planned series of new 3- (1,2,3-triazole) coumarin derivatives (21) proposed in this work, based on the structural requirements of these alkylamino-indanone inhibitors, where the maintenance of the alkylamino group was proposed. cyclic, the exchange of indanone by coumarin nucleus, through non-classical ring expansion isosterism and addition of 1,2,3-triazole group. The synthesis of compounds (21a-k) begins by the synthesis of 7-hydroxycoumarin (24) by a Pechmann condensation in 70% yield. Subsequently, an O-alkylation reaction (26a-d) was performed with a series of dibromers with different chain sizes, yielding 46-71%. Subsequently, bromination of position 3 of the coumarin nucleus (28a-d) was carried out via bromination reaction, with yields between 77 and 88%. In the next step, the Sonogashira cross coupling reaction (30a-d) was performed, yielding between 38 and 54%. Subsequently, the alkyne formed was subjected to a deprotection reaction (31a-d) with yields between 76 and 94%. At the same time, azides (33) were synthesized by the diazotation reaction between aromatic amines and sodium azide. Then a reaction of Click Chemistry (34a-d) was then performed between alkynes (31a-d) and azides (33), leading to the formation of the 1,2,3-triazole heterocycle, with yields between 61 and 79%. Finally, an amination reaction was performed on the alkyl chain (21a-k), leading to the final compounds with yield ranging from 52 to 86%. The obtained compounds were purified and then characterized by spectroscopic techniques (1 H and 13 C NMR). All synthesized compounds were able to inhibit AChE, tested and had IC50 values ranging from 0.006 to 4.79 μM.

3
  • RODRIGO CESAR FERNANDES BARBOSA

  • PROSPECTING MARINE MACRO ALGAE TO EVALUATE THE ACTIVITY AGAINST Leishmania infantum AND DETERMINATION OF THE PROFILE OF STEROLS OF Neobenedenia melleni

  • Advisor : MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • COMMITTEE MEMBERS :
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • VALTER VIANA ANDRADE NETO
  • MARIA RAQUEL GARCIA VEGA
  • Data: Feb 17, 2020


  • Show Abstract
  • Benthic algae proliferate through the retention of nutrients present in the water. Growing faster in high organic contents water. This uncontrolled proliferation cause an oxygen water concentration decrease, which impacts the fauna of the ecosystem in question, motivating the removal of algae from these sites by the environmental protection agencies, which guarantees the viability of biomass for phytochemical studies, without causing environmental impacts. Marine plants need to produce secondary metabolites related to predators defense, in a critical concentration enough to mitigate the seawater dilution effect. Thus, marine natural products tend to have high biological activity in low concentrations. The perspective of compounds with biological activities of interest to human health justifies the study of marine natural products, especially using tools such as molecular modeling and structural modification, as a way of equating the relation between activity and toxicity, which motivated the accomplishment of this study about of the activity of seaweed extracts against Leishmania infantum and Neobenedenia melleni. The genus Leishmania comprises digenetics protozoa, that live alternately in vertebrate hosts and vectors insects, wich is responsible for the transmission of the parasite from one host to another. L. infantum is one of the species responsible for leishmaniasis visceral occurrence, a clinical form of the disease that affects, in addition to humans, other vertebrates, mainly dogs. Different concentrations of crude extracts and basic fractions of Ulva fasciata, Ulva flexuosa, Dictyota menstrualis and Sargassum vulgare against L. infantum promastigotes were tested, where after the incubation period of 72 hours at 26ºC the reagent resazurin, an indicator of mitochondrial metabolic activity. With the exception of the basic fraction of D. menstrualis, the others extracts and fractions showed no activity against the parasite, at the concentrations tested (0 - 128 μg/mL). The basic fraction of D. menstrualis presented IC50 of 55.08 μg/mL, which shows the potential of natural marine products as a source of bioactive compounds. The bioguided fractionation of the basic fractions of D. menstrualis and H. musciformis originated the HBH and F2' fractions, respectively presenting IC50 values = 30,4 and 62,2 µg/mL, demonstrating the importance of the fractionation steps, for optimization biological activity. N. melleni is an ectoparasite of marine fish, with a marked occurrence in culture systems, responsible for large losses for the mariculture industry. It is mainly fixed in the host's eyes, causing blindness, erratic swimming and difficulty in feeding, which can lead to death if not treated. The main treatment is through freshwater baths, which cause osmotic shock and consequent detachment of the parasite. Due to the logistics and high costs involved in this form of treatment, it is of great interest to develop alternative treatments for the control of this parasite. Given the few studies about its physiology and metabolism, previous studies on the potential pharmacological targets to be explored are necessary. In this context, the main sterols present in the lipid extract prepared from the tissues of the parasite were identified by Bligh & Dyer (1959), and evaluated by TLC and GC-MS. It was found that the parasite presents the precursors squalene and desmosterol, as well as cholesterol and cholesterol esters, indicating that the parasite possesses the enzymatic complex necessary for cholesterol biosynthesis and its storage as esters. In this way, the enzymes involved in cholesterol biosynthesis represent potential pharmacological targets for the control of N. melleni.

4
  • ARNALDO CARLOS LUCAS
  • Investigation of the Unimolecular Reactions in the Pyrolysis and Combustion Mechanisms for 2,5-dimethylfuran

  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • CLARISSA OLIVEIRA DA SILVA
  • GLAUCO FAVILLA BAUERFELDT
  • LEONARDO BAPTISTA
  • MARCIO SOARES PEREIRA
  • THIAGO MESSIAS CARDOZO
  • Data: Apr 20, 2020


  • Show Abstract
  • Furans are alternative fuels that can be mixed with diesel, increasing the energy balance and improving combustion performance. Among them, 2,5-dimethylfurane (DMF) is found. It is well established that, among initiation reactions, unimolecular decompositions are predominant. Therefore, the study of the reaction pathways that represent the main routes for the unimolecular decomposition of DMF and for the reactions of the main primary products was carried out. Theoretical calculations were performed at CCSD (T)/aug-cc-pVTZ//M06 2X/aug-cc-pVTZ level including geometry optimizations, vibrational frequency calculations and reaction paths. Kinetic parameters were predicted at the level of canonical variational transition state theory. The dependence of the rate coefficients with the temperature was evaluated. Migration paths 2-3 of CH3 and 3-2 of hydrogen were calculated. The migration of methyl 2-3 leads to 3,5‑dimethylfuran-2(3H)-ildene, which dissociates, forming methylketene and prop-1-yne. The 3-2 hydrogen migration leads to 2,5‑dimethylfuran-3(2H)-ildene, which dissociates, forming the hexa‑3,4-dien-2-one. This last intermediate undergoes isomerization and another hydrogen migration with simultaneous C - C dissociation, leading to ketene and but-1-ino. The migration of hydrogen 3-4 leads to hexa‑4‑in-2‑one and then undergoes a dissociation leading to ketene and but‑2-ine. Breaking the C - O bond leads to the same intermediate as the 3-2 hydrogen migration. The dissociation of a methyl hydrogen from DMF was calculated leading to (5‑methylfuran‑2-yl)methyl. The rate coefficients were calculated and the global rate coefficients, as a function of temperature, for the unimolecular decomposition of DMF are adjusted to the Arrhenius expression: kglobal = 4.32x1015exp (-77.62 / RT) s-1 with the expressed parameters in units s-1 and kcal.mol-1. Reactions of the intermediate DMF-H, a product of unimolecular dissociation, were also investigated. The 3-2 migration path leads to 5‑oxohexa‑2,3‑dien-1-yl. It undergoes isomerization and dissociation until it reaches cetene and buta‑1,2‑dien‑4‑yl. Another route is initiated by the migration of hydrogen 4-5, leading to 2‑methyl‑5‑methyldiene‑2,5‑dihydrofuran‑3‑yl, where this has a dissociation reaching 1‑[(but‑3‑yn‑2‑yl)oxy]ethenyl until it reaches cetene and but‑1‑yn‑3‑yl. The migration of a 5‑4‑methyl leads to 3‑methyl‑5‑methylideneoxolan‑4‑yl‑2‑ylidene, which goes through another three stages until it reaches carbonyl and penta‑1,2,4‑triene. The last route starts with the breaking of the C ‑ O bound leading to the 5 ‑oxohexa‑1,2‑dien‑4‑yl and then goes through three more steps reaching the ketene and buta‑1,2‑dien‑4‑yl. This work presents new data on the study of DMF pyrolysis with results close to the experimental and unimolecular reaction paths not previously seen.

5
  • CRISTIANO DE SOUZA ALMEIDA
  • Kinetic Study of the Unimolecular Reactions in the Dimethoxymethane Pyrolysis and Combustion Mechanisms

  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • GLAUCO FAVILLA BAUERFELDT
  • LEONARDO BAPTISTA
  • MARCIO SOARES PEREIRA
  • Data: Sep 15, 2020


  • Show Abstract
  • Currently, the search for renewable and clean energy resources, important and strongly interconnected characteristics, is gaining increasing prominence in scientific research. Within this focus, great interest has been dedicated to the energy efficiency of a category of oxygenated fuels: polyoxymethylene dimethyl ethers (POMDME). Dimethoxymethane (DMM, CH3OCH2OCH3) is found in this group, offering cleaner combustion, free from soot and polluting oxides such as SOx. This study aims at proposing a sub mechanism of initiation steps for the DMM combustion and pyrolysis kinetic models. Specifically, the kinetics and thermodynamics of DMM unimolecular reactions are discussed. Calculations were performed at the M06-2X/aug-cc-pVTZ level including geometry optimizations, vibrational frequencies and reaction paths calculations. Results suggest that the dissociation reaction pathway, forming CH3 + OCH2OCH3, is the main reaction channel, with the lowest dissociation limit, 82.40 kcal.mol-1. The reaction channels that lead to H2COCHOCH3 + H2, CH3O + CH2OCH3 and HCOCH2OCH3 + H2 are competitive, with reaction barriers of 85.90, 87.38 and 87.95 kcal.mol-1, respectively. Hydrogen atom dissociation pathways, with a dissociation limit of 94.56 and 95.86 kcal.mol-1, and the decomposition reaction that leads to H2 + CH2OCH2 + H2CO are unfavorable, both from the kinetic and thermodynamic points of view.Changing the focus of the study to the decomposition reactions of the primary radicals, the pathways that lead to HCO + CH2OCH3, H2CO + HCOCH3, H2COCHO + CH3 are highlighted because they are the most favorable, with reaction energies in the respective values 15.87, 9.97 and -1.76 kcal.mol-1, the latter having an exothermic profile. Results for the dissociation reactions agree with the literature data. The kinetics of decomposition reactions, on the other hand, represent a new contribution to this work. Kinetic parameters, calculated with the canonical variant transition state method, for the most important reaction channels, contributed to the inclusion of these steps in the combustion model for dimethyl ether, as well as the composition of the combustion model for DMM. Finally, the thermodynamic and kinetic information on the unimolecular processes related to the combustion of DMM obtained in this work have shown to be an important contribution to the understanding of the combustion of alternative POMDME fuels.

Thesis
1
  • FELIPE VITORIO RIBEIRO
  • Design, Synthesis and Antitumor Evaluation of Substituted Dihydropyrimidinones and Imidazopyridines Derived from Substituted 3-keto-coumarins

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • BRUNO ALMEIDA COTRIM
  • ARTHUR EUGEN KUMMERLE
  • CEDRIC STEPHAN GRAEBIN
  • DANIEL PAIS PIRES VIEIRA
  • LEANDRO SOTER DE MARIZ E MIRANDA
  • RENATA BARBOSA LACERDA
  • ROSANE NORA CASTRO
  • Data: Mar 6, 2020


  • Show Abstract
  •  

    Cancer is a term used for diseases in which abnormal cells divide without control and are able to invade other tissues, and can spread to distant places in the body through the blood and lymphatic systems through a process known as metastasis, being considered by the World Health Organization. Health one of the biggest health problems facing humanity in this century. Among the various therapeutic classes for the treatment of cancer are coumarins and imidazopyridines, which are the target of continuous investigations of biological interest due to their pharmaceutical properties and different mechanisms of action. Thus, the present thesis proposes the planning, the synthesis of a series of dihydropyrimidinonic analogues to monastrol (165a-u), the determination of the mechanistic reaction pathway, since its attainment goes through a Biginelli three-component reaction, and its biological evaluation. The planning, synthesis, characterization and antiproliferative evaluation of new imidazopyrines (166a-x) is also a focus of this work. The series described here were planned through molecular hybridization of the dihydropyrimidinone or imidazopyrine nucleus with the coumarin subunit. Both nuclei are proven to be active on tumor cell lines. Therefore, this work aims to study the synthesis process of the planned series, its reaction scope and to evaluate its antiproliferative properties. The series were synthesized through classic reactions of organic chemistry. All series were characterized by physical and chemical methods of analysis. This is the first report proving by EM-ESI and theoretical calculations that the coumarin nucleus and its multicomponent reaction mechanism curiously passes through a Knoevenagel intermediate, which was considered unlikely in the literature. The libraries of new compounds were obtained with low to excellent yields (23-96%), and their final structure was also confirmed by X-ray diffraction studies. Among the dihydropyrimidinones the ones that are most active against the PC-3 tumor cell were those that have a coumarin position 7 diethylamino (IC50 = 3.28 µM) and those with more structural similarity to monastrol (IC50 = 8, 89 µM), most of the tested substances were more active than monastrol (IC50 = 22.02 µM). And among imidazopyridines, this substitution profile is also the most active (IC50 = 2.07 µM for cell B16-F10), being ten times more selective for that cell compared to healthy cells. You can then see a very interesting structure-to-activity analysis and promising compounds in potency and selectivity.


2
  • GLADSON DE SOUZA MACHADO
  •  

    Investigations in Combustion Chemistry using Models of Theoretical Chemical Kinetics and Numerical Simulations


  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • ROBERTO DE BARROS FARIA
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • CLARISSA OLIVEIRA DA SILVA
  • GLAUCO FAVILLA BAUERFELDT
  • GRACIELA ARBILLA DE KLACHQUIN
  • Data: Mar 6, 2020


  • Show Abstract
  • This work aims to investigate the action of theoretical chemical kinetics models for the treatment of combustion chemistry related problems. Four different cases were studied. In the first case, the hydrogen abstraction reaction channel in the formaldehyde + hydroxyl radicals reaction mechanism was investigated at the CCSD (T) / CBS level, with a pre-barrier complex and a saddle point stabilized by 3.31 and 1.35 kcal mol-1 with respect to the reactants, respectively. However, Gibbs free energy profile suggests that the formation of the pre-barrier complex at temperatures above 550 K is an endergonic process. Therefore, above this temperature value the reaction can be considered elementary, and the calculation of the rate coefficients is suggested by the canonical variational transition state theory method. In the second case study, the kinetic investigation of the decomposition of formic acid was carried out. Although the two main pathways, decarboxylation and dehydration, presented very similar barrier values, 65.40 and 65.03 kcal mol-1, respectively, at the CCSD(T)/CBS level, the prevalence of the dehydration pathway can be explained by the isomerization reaction between the Z and E conformers. The rate coefficient for the formation of the Z-conformer is always higher than that for the other conformer. Furthermore, through RRKM calculations and subsequent solution of the master equation, it was found that the transition from the second order regime to the falloff regime occurs at 0.5 atm at 1400 K. In the third case study, five initiation steps in acetone combustion mechanism were investigated: four unimolecular reactions and one bimolecular reaction, the latter being the abstraction of hydrogen by molecular oxygen. These reactions were analyzed at the CCSD(T)/aug-cc-pVTZ//M06-2X/aug-cc-pVTZ level. Rate coefficients were calculated using the RRKM theory with subsequent solution of the master equation, for the unimolecular reactions and for the bimolecular reaction the canonical transition state theory was applied. The dissociation reaction, breaking of the C-C bond, proved to be the main route among the unimolecular steps. The combustion mechanism proposed by Sarathy was optimized by the insertion of the calculated kinetic parameters calculated for acetone, and the error in the prediction of ignition time was reduced from 81% to 24%. Finally, in the fourth case study, 0D simulations of an ideal Otto cycle were performed with the following fuels: acetone, butanol, ethanol, butanol/ethanol and acetone/butanol/ethanol. A spark model was proposed through the dissociation of 5% of oxygen and fuels. In the integration of the combustion mechanism, the analysis of reaction rates demonstrated that all fuels are mainly initiated by the reaction of oxygen atoms with methyl radicals, generating formaldehyde and hydrogen atoms. These atoms pass through some stages until the formation of hydroxyl radicals, which react with the fuels through hydrogen abstraction reactions. After analyzing the case studies, it is concluded that the choice of the quantum mechanical method combined with thermodynamics, the appropriate kinetic model and numerical analyzes generated satisfactory results, capable of proposing solutions for open discussions in the literature, new rate coefficients and interpretations from a combustion mechanism.

3
  • DAIANA DE FATIMA PORTELLA FRANCO
  • SYNTHESIS AND PHARMACOLOGICAL EVALUATION OF NEW 3-AMINO-1,2,4-TRIAZOLES AS ENZYME INHIBITORS INVOLVED IN ALZHEIMER'S DISEASE

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • SÉRGIO PINHEIRO
  • LUANA DA SILVA MAGALHÃES FOREZI
  • ARTHUR EUGEN KUMMERLE
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • RENATA BARBOSA LACERDA
  • ROSANE NORA CASTRO
  • VAGNER DANTAS PINHO
  • Data: Mar 13, 2020


  • Show Abstract
  • Alzheimer’s Disease is a chronic neurodegenerative disorder, capable of provoking progressive
    loss of memory and other functions. It is a complex disease, multifactorial and with an unknown
    origin. Characterized by decrease of cholinergic neuronal activity; deposition of anomalous
    protein aggregates; neuroinflammation; disfunction of metallic homeostasis; and oxidative
    stress. Currently, the treatment is based on symptomatic control, mainly with cholinesterase
    inhibitors. Due the unsuccessful clinical results of most of the drug candidates against
    Alzheimer’s Disease, the strategy based on multitargets compounds, has been being very
    relevant in this context. Therefore, the objective of this paper is synthesis and pharmacological
    evaluation of a hybrid series of 1,3-amino-1,2,4-triazoles, the multitarget compounds (
    89a;90aab) for Alzheimer’s Disease treatment, based on non-classic isosteric exchange of triazines for
    3-amino-1,2,4-triazoles; and molecular hybridization with the classic drug donepezil. The
    compounds containing 1,3-amino-1,2,4-triazoles nucleus were obtained through the
    regioselective synthesis from N-acyl-2-methyl-isothiourea N-Boc using microwave irradiation
    (Y= 45% - 88%). Followed by alkylation reactions (37% - 79%); amination (35% - 66%); and
    deprotection of Boc group (85% - 96%), obtaining the final products (
    89a;90a-aa), which were
    all characterized by RMN
    1H and 13C. The compounds 90p (R1= NO2) (AChE; IC50 = 0,386;
    IS= 5,86) and the compound
    90v (R1= Bz) (BChE; IC50 = 0,416, IS= 3,66) presented the highest
    inhibitory activities to the cholinesterases AChE and BuChE respectively, in addition, presented
    mixed inhibition profile in the assays of enzymatic kinetics. Furthermore, the molecular
    docking has showed the mainly interactions between the compounds (
    89a and 90p) with the
    residue W86, W286 and Y124 of AChE active site. However, the compounds (
    89a; 90a-ab)
    have not showed antioxidant activities in DPPH assay. In the end, spectroscopic results of
    fluorescent emission indicate the formation of the triazole complex (
    89a; 90b; 90r) with
    metallic ions, and the compound with best performance complexed with all metallic ions: Zn
    2+,
    Cu
    2+, Al3+, Fe3+. The results were promising, because were obtained more active compounds
    than the prototype, including the capacity of complexing with metallic ions, important
    properties to defeat Alzheimer. As a perspective, the compounds (
    89a; 90a-ab) will be send to
    assays of βA aggregation inhibition and neurotoxicity; and the exploration of new series varying
    substituents in benzylpiperazine group.

4
  • NEIDE MARA DE MENEZES EPIFANIO
  •  
    CHEMICAL CHARACTERIZATION AND ANTIOXIDANT ACTIVITY OF THE Aqueous Extract of SALSA CRESPA (Petroselinum crispum var. Crispum)
  • Advisor : DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • COMMITTEE MEMBERS :
  • SILVANA MARIA ZUCOLOTTO LANGASSNER
  • LEANDRO MACHADO ROCHA
  • MARCOS DIAS PEREIRA
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • ROSANE NORA CASTRO
  • Rogelio Pereda-Miranda
  • YARA PELUSO CID
  • Data: Dec 18, 2020


  • Show Abstract
  • Oxidative stress, resulting from the imbalance between the production and elimination of free radicals, is of great importance in the processes of aging and cell death. The intake of condiment herbs, as salt substitutes, has been stimulated by the fact that they contain bioactive compounds capable of deactivating free radicals. The objective of this work was to determine the content of phenolic compounds and total flavonoids (Folin-Ciocalteu and Aluminum Chloride method, respectively), to evaluate the antioxidant capacity (DPPH and FRAP methods), and to promote a phytochemical screening of the aqueous leaf extract of Petroselinum crispum var. crispum (parsley). Twenty-nine glycosylated flavonoids were identified in the extract, with apiin being the main compound; from the acid hydrolysis of the apiin, the aglycone apigenin (90% purity) was obtained. A high content of phenolics (12.49 ± 1.70 mg GAE / g of parsley extract) and total flavonoids (15.05 ± 2.20 mg of quercetin equivalents / g of parsley extract) were quantified in parsley, in addition to high antioxidant activity (EC50 - 15.50 mg.mL-1, DPPH method) and (189.8 mM Fe (II) / mg of dry plant extract - FRAP method). In vivo tests with Saccharomyces cerevisiae cells showed low toxicity of the aqueous extract of the parsley, however it revealed a high dose-dependent antioxidant potential, mainly in the lipoperoxidation test. In addition, the glycosylated flavonoid apiin also showed antioxidant action on yeast cells under oxidative stress in the cell viability assay (0.1 mM) and lipid peroxidation (0.01 and 0.1 mM), while apigenin was slightly antioxidant. Therefore, it is likely that the antioxidant activity of apiin is related to the total antioxidant capacity of parsley.

2019
Dissertations
1
  • GLAUCO FONSECA SILVA
  • Theoretical study of adsorption of thiophene derivative monomers on graphene

  • Advisor : ANTONIO MARQUES DA SILVA JUNIOR
  • COMMITTEE MEMBERS :
  • ANTONIO MARQUES DA SILVA JUNIOR
  • CLARISSA OLIVEIRA DA SILVA
  • IVAN GUILHON MITOSO ROCHA
  • Data: Jan 23, 2019


  • Show Abstract
  • Graphene is an inorganic semiconductor with interesting physical and chemical properties. It has been consolidated as an important functional material for applications in electronic and optoelectronic devices. In other way, organic semiconductors have received prominence due to advantages such as chemical and mechanical flexibility, compatibility with plastic substances and relatively low cost. In this context, thiophene derivatives develop a crucial role. Thiophene is an important aromatic heterocyclic molecule with a great variability of potential peripheral groups, which make its derivatives excellent active components for electronic and optoelectronic organic devices. According to the literature, hybrid inorganic-organic semiconductors present improved characteristics compared to the isolated materials. Thus, in order to study a hybrid inorganic-organic semiconductor model by first-principles calculations, it was considered simultaneous adsorption of thiophene pairs, both unsubstituted or both substituted, on a single graphene sheet. For derivatives, it was used a thiophene monomer functionalized with a charge-releasing group (N(CH3)2) and a monomer with a charge-withdrawing group (NO2). First-principles calculations were performed using density functional theory (DFT), as implemented in the VASP package. The wave functions and pseudopotential were generated within the projector augmented wave (PAW). Exchange-correlation effects and van der Waals (vdW) forces were treated in the generalized gradient approximation (GGA) by using the optB86b-vdW functional. According to the results, there is no significant change on geometric properties when the thiophene and graphene systems are isolated or adsorbed. The differential charge density (DCD) analysis showed a small increase of the electron density between the adsorbed systems. Lastly, the density of states (DOS) and the band structures showed that the adsorption does not significantly affect the electronic structure of the graphene, indicating a very weak physical adsorption.

2
  • ROSIANE CONCEIÇÃO DOS SANTOS SIQUEIRA DA SILVEIRA
  • CHEMICAL CHARACTERIZATION OF THE ESSENTIAL OIL OF Schinus molle L. AND ITS 
    ANTIHEMOSTASTIC PROPERTY
  • Advisor : DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • COMMITTEE MEMBERS :
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • MARCO ANDRE ALVES DE SOUZA
  • CRISTIANO JORGE RIGER
  • LUCIANA WERMELINGER SERRÃO
  • BIANCA FERNANDES GLAUSER
  • Data: Feb 6, 2019


  • Show Abstract
  • Cardiovascular diseases, especially thrombosis, are associated with ischemic heart disease and stroke, which according to the 2010 Global Disease Burden Study have collectively caused one in four deaths worldwide. Essential oils (OE) have great importance in the development of research, for example synergistic effects with oral anticoagulants have already been reported, indicating a possible antithrombotic property. The objective of this work was to evaluate the chemical composition of Schinus molleL essential oil. and to analyze its activity on hemostasis, as well as monoterpene myrtenol. In order to extract the essential oil from the leaves of Schinus molle L., the hydrodestillation technique was used through the Clevenger apparatus, and the material obtained was characterized by CG-DIC-MS. Anticoagulant action was performed by TTPa and TP tests, and the platelet aggregation assays were performed in an aggregometer following the turbidimetric method of Born & Cross (1963), using ADP and collagen as inductors of aggregation. In the chemical characterization of the OE, 45 substances were identified, the major components being sesquiterpenes (88.77%), of which α-Muurolol and δ-cadinene represented 22.85% and 9.66%, respectively, a result confirmed by the comparison of spectra (5mg.ml-1), using ADP as an inducer, showed higher inhibitory power (80%) and the highest concentration (40mg.ml-1) inhibited 48% of platelet activation. Using collagen as an inducer, OE showed no significant activity, as well as showing activity in the coagulation assays, suggesting that the antithrombotic action of OE is especially targeted via platelet aggregation, possibly by the inhibition of P2 family receptors, which are activated by ADP. Mirtenol showed antiplatelet activity using the two inducers and reached 98.5% inhibition of platelet aggregation, and this was a very satisfactory result, and its inhibition of aggregation was more potent in the induction of collagen. In contrast, mirtenol did not interfere with blood coagulation tests, which directs its antithrombotic activity to the antiplatelet action. The OE of S. molle L. presents mainly sesquiterpenes, besides having antithrombotic activity exclusively through inhibition of platelet aggregation, possibly induced by ADP, because OE does not interfere in the blood coagulation pathways and does not act on the induction by collagen. The monoterpene mirtenol has antithrombotic activity exclusively through the antiplatelet route, being its activity pronounced by the induction of the collagen. These results are very useful for following the studies with other inducers of platelet aggregation and future in vivo studies, in order to promote scientific bases for the development of a herbal medicine that can be used in the prevention or treatment of cardiovascular diseases. This is the first report of the antiplatelet action of Schinus molle L. and the monoterpene myrtenol

3
  • GABRIELA NASCIMENTO PEREIRA
  • THEORETICAL STUDY OF ADSORPTION OF THIOPHENE DERIVATIVE DIMERS ON GRAPHENE

  • Advisor : ANTONIO MARQUES DA SILVA JUNIOR
  • COMMITTEE MEMBERS :
  • ANTONIO MARQUES DA SILVA JUNIOR
  • HÉLIO FERREIRA DOS SANTOS
  • MARCIO SOARES PEREIRA
  • Data: Feb 25, 2019


  • Show Abstract
  • Semiconductors play an important role from the technological point of view, being employed
    in several electronic devices, such as televisions, computers, cell phones, solar panels, among
    others. These semiconductors, consist mostly of inorganic materials, such as silicon and
    germanium. However, recently, organic semiconductors have earned attention in this scenario,
    allowing the creation of cheaper and more flexible technologies, having application, for
    example, in televisions and cell phones already available in the commercial market. Thus, in
    search of development of new technologies, semiconductors has been the target of several
    studies, which investigate potential systems that allow the construction of smaller and better
    performing devices, linked to cost x benefit. Graphene and an organic polymer known as poly
    (3-hexylthiophene) (P3HT) are considered as promising systems for technological use, giving
    shape to the hybrid semiconductors. Since thiophene is the base that constitutes P3HT, the
    adsorptions and properties of the polymer come mainly from the heterocyclic ring of thiophene,
    as reported in the literature. Thus, one way to investigate this type of system can be obtained
    by thiophene dimers, used to mimic the behavior of P3HT. In this context, this work aims to
    evaluate the characteristics of the adsorption process between the graphene / thiophene dimer
    system, studying the influence of donors and withdrawing groups on the organic matter, as well
    as the position of the molecule on the graphene surface. The calculations are performed using
    a theoretical approach using the Density Functional Theory (DFT) method in geometry
    modeling. The structural characteristics of the systems were observed through the evaluation
    of geometric properties, such as the verification of the C-C and C-S bond distances of the
    thiophene rings and the distances between the surface and the adsorbed molecule. The
    adsorption energy values obtained were low, which shows a quite physical adsorption process.
    As techniques of adsorption analysis and investigation of the electronic structure were used:
    differential charge density (DDC), density of states (DOS) and Band Structure. Thus, the
    different behaviors of the systems in relation to the type of group used can be observed. From
    the results obtained in these analyzes, it can be verified that the systems involved present a
    weak interaction, basically physical, being governed by Van der Waals interactions.
    Furthermore, no significant charge transfer between the two structures was observed, in contrast
    to what was expected. This characteristic was maintained despite the addition of dopant groups
    to the system. The present work can still be expanded to investigate properties that have not
    been explored here, and serve as a basis for further studies.

4
  • TATIANE NICOLA TEJERO
  • Investigation of the Biginelli Reaction Mechanism

  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • GLAUCO FAVILLA BAUERFELDT
  • ARTHUR EUGEN KUMMERLE
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • JOSE WALKIMAR DE MESQUITA CARNEIRO
  • Data: Mar 13, 2019


  • Show Abstract
  • Multicomponent reactions (MCR) have received great attention in organic synthesis and medicinal chemistry, since they allow the design of new molecules and pharmaceuticals, in special, with great structural complexity and excellent yields. In the Biginelli reaction, the reactants are an aldehyde, a β-ketoester and urea or thiourea leading to a myriad of dihydropyrimidinones/thiones. From the possible combinations of the reactants, three reaction pathways can be expected: the Knoevenagel pathway, the iminium ion pathway and the enamine pathway, being the second pointed out, from both experimental and theoretical works with common aromatic and aliphatic β-ketoesters, as the most probable initiation route. However, if a coumarin β -ketoester derivative is used, the Knovenagel pathway seems to prevail. In order to understand the differences between these reaction pathways, this work has been proposed aiming to the calculations of the possible reaction paths in the coumarin β-ketoester + benzaldehyde + urea MCR and to the understanding of the contribution of the coumarin nucleus in the β-ketoester moiety for the changes in the reaction mechanism. Geometry optimizations have been then performed at the Density Functional Theory (DFT) level, adopting the M06-2X, B3LYP and BHandHLYP fuctionals and the 6-31+G(d,p) basis set. From our calculations, the stationary points with lower relative energies belong to the Knoevenagel reaction path. All reaction pathways are initiated with the formation of an ion-dipole pre-barrier complex, stabilized by 8.76 – 14.84 kcal mol-1 (relative to the isolated protonated reactants). The calculated barrier height for the reaction between the coumarin β-ketoester and benzaldehyde (which initiates the Knoevenagel channel) is -18.10 kcal mol-1 (relative to the isolated protonated reactants). For the enamine and iminium ion pathways, barrier heights are 6.21 kcal mol-1 and -16.27 kcal mol-1, respectively (the enamine pathway is initiated from the coumarin β-ketoester and urea reaction and the iminium ion is initiated form the urea and benzaldehyde reaction). Therefore, the barrier height of the first step in the Knoevenagel pathway is ca. 24 and 2 kcal mol-1 lower than the barrier heights of the first step in the enamine and iminium ion pathways, respectively. The reaction product in the Knoevenagel pathway is also the most stabilized (20.44 kcal mol-1 below the isolated protonated reactants, while the products in the enamine and iminium ion pathways are located, with respect the isolated reactants, at 5.85 and -25.04 kcal mol-1, respectively). The second step in all pathways is the dehydration, and barrier heights are 31.12 and 36.13, 28.85 and 31.99 and 32.60 and 36.25 kcal mol-1 (Knoevenagel, enamine and iminium ion, respectively). The final steps concern the addition of the third reactant, and the intermediates and transition states belonging to the Knoevenagel pathway remain the lowest energy structures. Thus the Knoevenagel pathway is finally attributed as the lowest energy pathway in this complex mechanism for the coumarin β-ketoester + benzaldehyde + urea MCR. The Knoevenagel intermediate has been experimentally detected, and such previous observation can be justified from our theoretical calculations. These results satisfactorily compare to the experimental observations and demonstrate that the coumarin nucleus in the β-ketoester moiety promotes the change of the mechanism initiation from the iminium ion to the Knoevenagel pathway.

5
  • ISAC MARINHO DIAS
  • Synthesis and characterization of novel coordination compounds containing functionalized pyrazole as ligands

  • Advisor : GUILHERME PEREIRA GUEDES
  • COMMITTEE MEMBERS :
  • AMANDA PORTO NEVES
  • GUILHERME PEREIRA GUEDES
  • MARIA CLARA RAMALHO FREITAS
  • MARIA DAS GRAÇAS FIALHO VAZ
  • SUSANA MARIA DE ORNELAS QUINTAL
  • Data: Mar 13, 2019


  • Show Abstract
  • Aromatic heterocycles such as pyrazoles are widely used in the construction of new molecular architectures when coordinated to ions of the d block leading to interesting biological and technological properties. In this work we describe the synthesis and characterization of two functionalized pyrazole ligands: potassium 5-amino-1-(benzothiazol-2-yl)-1H-pyrazole-4-carboxylate (L1) and potassium 5-amino-1-(pyrazin-2-yl)-1H-pyrazole-4-carboxylate (L2). The syntheses of the ligands were performed in three steps: (1) formation of the pyrazole nucleus with an ester group, (2) hydrolysis and (3) neutralization. In addition, a new azo (-N=N-) photosensitive compound (E)-diazene-1,2-diylbis(4,1-phenylene)bis(hydrazinecarboxylate) (L3) was obtained. The synthesis of L3 was performed by reduction of 4-nitrophenol in alkaline conditions, affording the azo group, followed by two additions reactions in the phenol and carbonyl groups. All reactions steps were characterized by infrared, 1H-NMR and 13C-NMR spectroscopies, as well as melting point and GC-MS analyzes. The L1 and L2 ligands were used to synthesize new coordination compounds containing CoII, FeII, MnII or CuII ions. By using the slow diffusion methodology, two new families of coordination compounds were obtained, with molecular formulas cis-[M(L1)2(OH2)4] (M= FeII, CoII and NiII) and trans-[M(L2)2(OH2)4] (MnII and CoII). The crystal structures of these complexes were solved by X-ray diffraction and it was observed that the ligands are coordinated in a monodentate fashion. . The crystal packing of these systems is stabilized by intra and intermolecular hydrogen bonds. The complexes cis-[M(L1)2(OH2)4] were studied by cyclic voltammetry, which the oxidation and reduction peaks were observed with respect to the FeII, CoII and NiII ions. The Mössbauer spectroscopy for cis-[Fe(L1)2(OH2)4] showed a high spin state for the FeII ion in the temperature range 4-300 K. The magnetic measurements for the compounds cis-[Fe(L1)2(OH2)4] (M = CoII, FeII) showed a key role played by the axial and rhombic anisotropy from the metal ion, since the exchange interactions are negligible. Furthermore, this family was evaluated against the inhibition of the acetylcholinesterase showing good inhibition rates in a concentration of 10 μmol L-1. Through the slow diffusion methodology, new coordination compounds [Cu(L1)2(Py)2] and [Co(L1)2(Py)2] were obtained. The crystal structures of the compounds were elucidated by single crystal X-ray diffraction; in the [Co(L1)2(Py)2] complex, the metal ion lies on a distorted tetrahedral geometry, coordinated to two pyridine molecules and two oxygen atoms from different carboxylate groups in a monodentate fashion. The complex [Cu(L1)2(Py)2] presented the CuII ion in a distorted octahedral geometry, with two L1 ligands coordinated in a bidentate fashion the coordination sphere of the metal ion was completed by two coordinated pyridine molecules.

6
  • LAÍS PETRA MACHADO
  • Theoretical Studies of Photoisomerization of Butadiene and Substituted Butadiene 

  • Advisor : CLARISSA OLIVEIRA DA SILVA
  • COMMITTEE MEMBERS :
  • ANDRE GUSTAVO HORTA BARBOSA
  • ANTONIO MARQUES DA SILVA JUNIOR
  • CLARISSA OLIVEIRA DA SILVA
  • GLAUCO FAVILLA BAUERFELDT
  • MARCIO SOARES PEREIRA
  • THIAGO MESSIAS CARDOZO
  • Data: Mar 13, 2019


  • Show Abstract
  • The interaction of light with matter is present in several important processes of nature. Photons are employed by natural systems as energy donors or as information elements. And from the energy from the photons the Z-E isomerization of the C = C bond can be induced as, for example, in the butadiene molecule. Isomerization consists of a photochemical process widely explored and forms the fundamental step in many photobiological processes such as vision, light-induced ion bomb and phototaxis. The project aims to obtain stationary points from the surface of the potential energy for the butadiene molecules substituted with the Cl group, carbonyl substituted butadiene (CHO), butadiene substituted with the amine group (NH2) and butadiene. The surface description generate a model for the understanding of the influence of the groups on the geometry and the process of photoisomerization. As a starting point for the investigations in the excited state, the configurations of the molecules corresponding to the minimum energy states in the ground state were mapped by the Hartree Fock (HF) method. All the molecules were optimized (S0) in the CASSCF method, in which we chose, for the carbonyl substituted butadiene molecules, six orbitals and six electrons, for the chlorinated substituted butadienes four orbitals and four electrons were chosen, for the butadiene substituted with amine and butadiene two orbitals and two electrons were chosen. In addition to the minimum in the excited state, we found some minimums at the conic intersection (IC) for Chloro-butadiene, others for butadiene, three minimums for IC for pentadienal and still others for the amine-butadiene molecule. When comparing the results of the IC minimums with the results found in the literature it is realized that the substituents do not significantly alter the geometry of the intersection of the butadiene without substituent. An IC was also found that is possibly associated with the chlorine dissociation process, however, no other CI was found similar to it in the literature. This possible dissociation may be a third path of reaction, the other two pathways being isomerization and electrocyclization.

7
  • FELIPE MARINHO FERNANDES
  • Theoretical studies of the step of reducing steam reform through chemical cycles

  • Advisor : CLARISSA OLIVEIRA DA SILVA
  • COMMITTEE MEMBERS :
  • GLAUCO FAVILLA BAUERFELDT
  • CLARISSA OLIVEIRA DA SILVA
  • ANTONIO MARQUES DA SILVA JUNIOR
  • MARCIO SOARES PEREIRA
  • VICTOR DE OLIVEIRA RODRIGUES
  • THIAGO MESSIAS CARDOZO
  • Data: Mar 14, 2019


  • Show Abstract
  • The world energy matrix is mostly dependent on petroleum-based fuels. However, this pattern leads to several negative impacts mainly on the Earth's atmosphere. In addition, it is well known that, following the current rate of oil consumption, these inputs must end in less than 50 years. Therefore, the adoption of a sustainable energy matrix is fundamental for the future. Hydrogen is an excellent candidate to take over the reins of this energy matrix. When burned, it produces water as a product (considerably less harmful than the products of combustion of fossil fuels), and in car engines, for example, are up to three times more efficient than gasoline. There are a few ways, however, to produce hydrogen. The most usual, at present, are steam reform processes. However, a process has been revisited: steam reforming through chemical cycles. This is because, due to nanotechnology, iron oxide-based nanocatalysts were made possible by increasing the resistance of these important participants in the reactions involved in the process and thus making this method of hydrogen production synthesis possible. With this, we will approach with a theoretical bias the stage of reduction of the magnetite (chosen catalyst) in the catalytic reform to steam via chemical cycles: CH4 + 4Fe3O4 CO2 + H2O + 12Fe0. For this, it was approached the magnetite, which is a mineral, solid at temperature and ambient pressure and has minimum formula Fe3O4 was approximated to a Fe12O16 cluster structure. Due to the magnetic properties of the mineral, the reaction stages were studied in three different electronic state levels: singlet, triplet and quintet.To date, the triplet multiplicity was observed as the ground state of the cluster study carried out that swept from a molecule up to four molecules of Fe3O4, where the triplet difference for singlet and quintet was at least 94 kcal / mol for the largest cluster for the BPW91 DFT with dual polarized LAV2P base (BPW91 / LAV2P **). The largest cluster, Fe12O16, was adopted as the cluster used in the steps with chemical reactions. To date, only results on the singlet multiplicity have been evaluated and a physical adsorption channel (fisistion) was proposed with two distinct fisistion products, having energy differences between them of less than 5 kcal / mol, followed by an adsorption step (chemisorption), with five chemisorption products with a high energy dispersion value, all calculations performed at DFT level B3LYP with LAV2P ** base. Physical adsorption was related to chemical adsorption through a transition state that connected a fisistion product to a chemisorption product. This state was confirmed by a frequency calculation where an imaginary frequency of 1335.37i cm-1 was reported. In the future, it is intended to study the same paths in the two different multiplicities in order to compare which channel has the lowest energy. It will still be necessary to continue with the theoretical description to better understand this reaction channel and, with that, to contribute with the optimization of the process in order to better enable it.




8
  • LUCAS DE OLIVEIRA PIRES
  • ISOLATION, CHARACTERIZATION AND EVALUATION OF ANTIPARASITARY ACTIVITY (Trypanosoma cruzi) OF PROLIFERATED DERIVATIVES OF GREEN PROPOLIS

  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ROSANE NORA CASTRO
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • ROBERTO CARLOS CAMPOS MARTINS
  • CLAUDIA MORAES DE RESENDE
  • DAVYSON DE LIMA MOREIRA
  • Data: Mar 27, 2019


  • Show Abstract
  • Propolis is a resinous natural products elaborated by honeybees from different parts of plants, such as shoots and flowers. Its chemical composition is very complex and depends on factors such as climate, seasonality, soil, vegetation and also the bee species. Propolis has currently been identified as na importante source of bioactive compounds due to its high biological potential, with anti-inflammatory, antibacterial, antitumoral, antiparasitic and antioxidant activities. In this work, ethanolic and n-hexanic extracts were prepared from three samples of green propolis obtained in different regions of Rio de Janeiro. The quality of these extracts were evaluated using colorimetric methods for the determination of the total phenolic content – total phenolic and flavonoid contents – and also the antioxidant capacity was evaluated by capturing organic free radicals (DPPH and ABTS), as well as the ferric reducing antioxidant power (FRAP). The qualitative chemical profile of the extracts was evalutated through CLAE-DAD analisys, and the influence of the solvente polarity on the extraction profile was studied. The bioactive compounds 3,5-diprenyl-4-hydroxycinamic acid (Artepillin C), 3-prenyl-4-[(3-phenylpropanoil)-oxy]-cinnamic acid (Baccharin) and 2,2-dimethyl-8-prenylcroman-5-propenoic acid were isolated from the n-hexane exrtract by two chromatographic steps: fracionation of crude extract using the mixture of solventes chloroform/acetone in increasing gradiente concentration, followed by purification of fractions of interest by HPLC-UV in semipreparative scale, using the mixture methanol/water in increasing gradiente concentration. All the isolated constituents were characterized by NMR (1H and 13C), UV spectra and CG-MS techniques, and the contente of these componentes in the crude extract was quantified through HPLC-DAD in reverse phase. The antiparasitic activity of green propolis and its active principles was evaluated against amastihote and tripomastigoe forms of Trypanosoma cruzi, the parasite responsible for causing Chagas’ disease. 

9
  • GIULIANO DE MESQUITA CORDEIRO
  • THEORETICAL STUDY OF THE WUSTITE AND WATER REACTION IN REFORM CHEMICAL LOOP.

  • Advisor : CLARISSA OLIVEIRA DA SILVA
  • COMMITTEE MEMBERS :
  • CLARISSA OLIVEIRA DA SILVA
  • ANTONIO MARQUES DA SILVA JUNIOR
  • MARCELO HAWRYLAK HERBST
  • ANDRE GUSTAVO HORTA BARBOSA
  • VICTOR DE OLIVEIRA RODRIGUES
  • Data: Mar 29, 2019


  • Show Abstract
  • Reliable energy supply is a key issue for global economic growth and development. Currently, most of the global energy is produced from fossil fuels, constituting a inadequate environmental choice and a questionable bet in a mid and long term future. In this context, the adoption of hydrogen as a new energy matrix emerges as a promising alternative to diminish greenhouse emissions and accordingly the climate change. In this dissertation, it is proposed the theoretical study of an iron-based catalyst that is able to perform efficiently the reactions of chemical looping reforming process. Because this process, when thus driven, eliminates the need for molecular hydrogen purification (produced pure in the first stage of the process) and provides carbon beneficiation, generating CO, which may be used in various synthetic reactions. The quantum-mechanical calculations were performed using the density functional theory. In the description of the chemical system under study, it was decided to employ the chemical cluster approach. The cluster model is justified by the small size that the catalyst particles must have (nanoparticles), so that they are efficient in the chemical loop process. As for the investigation of the reaction between the metal oxide and the water, it was verified that it takes place in two stages. Initially, the dissociative adsorption of the water in the metallic cluster occurs. Subsequently, the combination of the hydrogen atoms is performed to form the H2 molecule. The modeling of the electronic structures of the clusters presented in this study were performed both by the spin restricted Kohn-Sham orbitals description (for spin multiplicity equals 1) and by the spin unrestricted Kohn-Sham orbitals description. Based on energy and geometric evaluations, it was possible to infer that the unrestricted treatment is more adequate for the description of the reaction under study.

10
  • LIN MACHADO DE LIMA
  • Study of the inhibition of monoamine oxidase by new synthetic compounds derived from coumarin.

  • Advisor : CRISTIANE MARTINS CARDOSO DE SALLES
  • COMMITTEE MEMBERS :
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • ANDRE MARQUES DOS SANTOS
  • ANDRE LUIZ GOMES VIEIRA
  • JAYME DA CUNHA BASTOS NETO
  • DANIELE CORRÊA FERNANDES
  • Data: Jul 1, 2019


  • Show Abstract
  • Monoamine oxidase [EC 1.4.3.4 (MAO)] is an enzyme located in the outer membrane of the mitochondria, which uses flavin adenine dinucleotide (FAD) as a cofactor to catalyze the oxidant conversion of an amine in its corresponding aldehyde, also producing ammonia and hydrogen peroxide. MAO activity regulates the levels of biogenic amines present in tissues, especially in the brain. MAO exists as two proteins: MAO-A and MAO-B. These isoforms were defined primarily by substrate affinities and inhibitor sensitivity. Accordingly, MAO-A oxidizes, preferably, serotonin, melatonin, noradrenaline and adrenaline. MAO-B preferably oxidizes phenylethylamine, an alkaloid from the metabolism of phenylalanine. The ingestion of phenylethylamine promotes the release of dopamine that acts in the brain stimulating euphoria. Concerning the inhibitors, MAO-A is preferentially inhibited by clorgiline. MAO-B is inhibited by deprenyl and pargyline. These inhibitorscan be used in the treatment of degenerative brain diseases.Since studies have shown that molecules derived from coumarins achieved excellent results as inhibitors of these enzymes, several new drugs derived from coumarin have been synthesized, which a few are very promising in the treatment of Alzheimer's and Parkinson's diseases. This study aimed to promote in vitro inhibition tests of MAO with new substances derived from coumarin.

11
  • IURI CARDOSO SOARES

  • Synthesis and characterization of novel coordination compounds based on a pyrazole-substituted ligand

  • Advisor : GUILHERME PEREIRA GUEDES
  • COMMITTEE MEMBERS :
  • ANTONIO DA SILVA FLORENCIO
  • ANTONIO GERSON BERNARDO DA CRUZ
  • FABIO DA SILVA MIRANDA
  • GUILHERME PEREIRA GUEDES
  • GUSTAVO BEZERRA DA SILVA
  • Data: Jul 24, 2019


  • Show Abstract
  • In this work five new coordination compounds of the first row transition metals, a functionalized pyrazole ligand, KL, (5-amino-1-phenyl-1H-pyrazole-4-carboxylate) and one of the amines as auxiliary ligands: 2,2'-bipyridine (2,2'-bipy), 4,4'-bipyridine (4,4'-bipy) or 1,10'-phenanthroline (phen) were obtained.  Three reactional steps for the synthesis of the KL ligand were performed, which precursors were characterized by nfrared spectroscopy, melting point, 1 H-NMR and 13 C-NMR. The crystal structure of the precursor EL was obtained by x-ray diffraction. After the formation of the pre-ligand KL, an electrophilic susceptibility map was generated from DFT calculations, which evidenced the tendency of this ligand to coordinate in different ways, depending on stoichiometric, energetic and / or entropic factors. Based on this knowledge about the possible modes of coordination of KL, the synthesis of the coordination compounds was carried out using synthetic methods to reach them. A new family of coordination polymers with molecular formula 1∞ [M (L) 2 (4,4'-bipy) 2 (H 2 O) 2] n (M = CoII, NiII and CuII, ) (1-3), a polymer of 1 [CuII 2 (L) 2 (phen) 2] n (ClO 4) 2 (4) and a [CuII 2 (L) (2,2'-bipy) 4] dimer ClO4) 3 (5) were obtained. These compounds were characterized by elemental analysis, infrared spectroscopy and single-crystal x-ray diffraction. In addition compounds 3, 4 and 5 were studied by electronic paramagnetic resonance (EPR). The magnetic properties of compound 1 in the AC mode revealed slow relaxation of magnetization at low temperatures. The results showed that 1 behaves as a single-ion magnet, with a reversal barrier for 50 K.

12
  • LUANA DE OLIVEIRA SANTOS
  • New approach for the determination of free glycerol in biodiesel based on periodate oxidation

  • Advisor : JOSE GERALDO ROCHA JUNIOR
  • COMMITTEE MEMBERS :
  • CARLOS EDUARDO RODRIGUES DE PAULA
  • FLAVIO COUTO CORDEIRO
  • JOSE GERALDO ROCHA JUNIOR
  • OTAVIO RAYMUNDO LA
  • VIVIANE GOMES TEIXEIRA
  • Data: Oct 29, 2019


  • Show Abstract
  • The quality standards for biodiesel commercialized in Brazil are set by the National Agency of Petroleum, Natural Gas and Biofuel (ANP), through Brazilian Resolution No. 45 of 2014 (RANP 45/2014). RANP 45/2014 sets the maximum free glycerol content in biodiesel added to diesel oil at 0.02% w/w. The higher concentrations of free glycerol could to lead problems in fuel storage tanks, formation of deposits and clogging in the engine injection system and emission of toxic aldehydes. In this work, a new approach to determine free glycerol in biodiesel from  soybean, palm, macauba (pulp) and used frying oils was developed employing the glycerol oxidation by the periodate and, after, masking of the excess periodate by the molybdate. This provided a decrease in the analysis time probably due to excess periodate employed and the determination of iodate formed. The iodate was quantified by the addition of iodide, forming the tri-iodide anion. The iodometric determination was performed in three days with two distinct methods based on the spectrophotometric and titrimetric techniques. In the spectrophotometric method, the glycerol was extracted by partition in ethanol-water/n-heptane and the tri-iodide was determined in the presence of starch (λ = 582 nm). Two analytical curves were constructed after analysis of glycerol standards in a dual and single beam spectrophotometer. The latter had lower precision in the measurements, and its analytical curve presented low limits of detection (1.9 mg L-1) and quantification (5.7 mg L-1), and good coefficient of determination (R2 = 0.9972). The repeatability of spectrophotometric method was satisfactory (CV < 12%), however the intermediate precision was unfavorable (CV < 39%). The analysis of glycerol standards in water by titrimetric method presented excellent accuracy, with relative errors below 3.0%. Detection and quantification limits were 1.2 mg L-1 and 3.5 mg L-1, respectively. Biodiesels were analyzed by titrimetric method after glycerol extraction by partition in water/n-heptane and, subsequent, determination of tri-iodide by the titration with Na2S2O3 standard solution, in the presence of starch. The precision of this method was good in repeatability (CV < 14%) and intermediate precision (CV < 8%). The accuracy of the titrimetric method was evaluated by recovery tests at three fortification levels: 250, 500 and 1000 mg L-1, reaching 91% to 105% of recovery. The similarity between the glycerol contents obtained in each method, between days were evaluated by ANOVA. The average global levels of free glycerol levels in the biodiesels obtained by both methods did not differ significantly at the 95% confidence level. The overall mean glycerol levels obtained by both methods were similar in the analysis of the biodiesels used in this study, according to the Student's t-test. However, the titrimetric method presented smaller variations between days, lower cost and greater simplicity compared to the spectrophotometric method. In addition, the assay was fast (10 min) when compared to the other analysis techniques described in the literature and of high detection capacity compared to other titrimetric methods.

13
  • RENAN AUGUSTO PEREIRA D AVILA
  • Dichromatometry: A proposal for the treatment and management of waste in the practice of analytical chemistry.

  • Advisor : VANESSA GOMES KELLY ALMEIDA
  • COMMITTEE MEMBERS :
  • VANESSA GOMES KELLY ALMEIDA
  • FABIOLA OLIVEIRA DA CUNHA
  • FLAVIO COUTO CORDEIRO
  • ANDRE VINICIUS DOS SANTOS CANUTO
  • EDIMAR CARVALHO MACHADO
  • Data: Nov 6, 2019


  • Show Abstract
  • At the Laboratory of Analytical Chemistry of UFRRJ, two practices of quantitative analytical chemistry draw attention due to the toxicity of the generated residues: dichromatometry and permanganimetry. In order to determine the iron content in aqueous solutions, the two titrimetric methods require heavy metals in their reactions, such as manganese, chromium, mercury, tin and the iron itself from the sample. These metals are known to be bioaccumulative and may have carcinogenic characteristics. Thus, it is essential not to discard this waste in the sewage system, adopting management measures and, if possible, treatment of the generated waste. In this work, proposals are presented for the recovery of the dichromate used, in addition to the iron present in the samples and manganese from potassium permanganate. The recovered dichromate was in a concentration ten times more diluted than the one used in the practical classes. However, the economic, environmental and educational viability guarantee the success of the methods.

Thesis
1
  • LUIZIENE SOARES ALVES
  • Impact of boron on grain yield, oil content and quality and on the biological potential of leaf 
    extract and sunflower strand.
  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • CRISTIANO JORGE RIGER
  • ANDRE MARQUES DOS SANTOS
  • EDNALDO DA SILVA ARAÚJO
  • CARLOS VERGARA TORRES JÚNIOR
  • MANLIO SILVESTRE FERNANDES
  • Data: Jan 24, 2019


  • Show Abstract
  • Sunflower is highlighted in the food industry as a result of its high grain productivity and oil quality. Its properties have been generating special interest on chemical research because of secondary metabolites with biological potential. A limiting factor to be considered for sunflower characteristics is nutrient availability. Among essential micronutrients, sunflower’s culture has high sensibility to excessive input of Boron element (B). This element acts on physiological and morphological processes and, therefore, it affects chemical and agronomic aspects. This work aims to evaluate sunflower’s grain productivity, content and quality of the seed oil. Moreover, the biological potential of sunflower’s tissue extracts grown under differential boron supply. During field experiments, three sunflower’s genotypes (Helio251, BRS323 and BRS324) were supplied with different doses of B: 0, 2.5, 5 and 8 kg ha-1. The B sensibility was evaluated using the amount of grains, content and quality of the seed oil, and B content in grains. The biological potential was determined using the highest B-sensitive genotype (Helio251). Aqueous (0.1 and 0.5%) and ethanolic (0.025 and 0.050%) extracts were produced using leaf and capitulum tissues, which were collected during R5 field stage. Afterwards, “in vitro” and “in vivo”assays led us to estimate antioxidant capacity and activity, respectively. Furthermore, aqueous extracts of leaf and capitulum (2.5, 5 and 10%) were evaluated in relation to its allelophatic potential on seed germination of Digitaria insularis. As a result, genotypes shown distinct response for B fertilization on field experiment. This micronutrient influenced grain productivity of the Helio251 and BRS323, and oil content in all genotypes. However, B was not recognized on major unsatured fatty acid profiles and grain protein. Despite of that, it was observed genotypical differences in oil quality, either on fatty acid parameters or on crude protein content. In vitro evaluation of hydroalcoholic and aqueous extracts of leaves and capitulum confirmed phenolic content, absence of flavonoids and antioxidant capacity, with ABTS and FRAP methods. As to the Saccharomyces Cerevisiae biological model shown antioxidant activity in aqueous and ethanolic extracts using “in vivo” assays. However, better values for antioxidant activity were found using ethanol as extraction solvent. Through analysis of HPLC, it was confirmed chlorogenic antioxidant compounds. This work allowed us to observe multiple functions of B, and its biological potential in sunflower leaves and capitulum extracts. It was noticed that B element influences sunflower crop production either negatively or positively, depending on the applied dose and genotype. In summary, the amount of antioxidant components changes with B supply. Moreover, sunflower has secondary metabolites with allelopathic and antioxidant contents that have potential to be useful for both chemical and agricultural industries.

2
  • SHEISI FONSECA LEITE DA SILVA ROCHA
  • Development of Empirical Models for Prediction of Selectivity and Activity of Shp2 Phosphatase Inhibitors Using Semi-Empirical Method PM7

  • Advisor : CARLOS MAURICIO RABELLO DE SANT ANNA
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • GLAUCO FAVILLA BAUERFELDT
  • CRISTINA MARIA BARRA
  • HAROLD HILARION FOKOUE
  • ANA RAFAELA MOREIRA DA SILVA
  • Data: Jan 29, 2019


  • Show Abstract
  • Shp2, together with Shp1, forms a small family of protein tyrosine phosphatases. Studies suggest that although inhibition of Shp2 is advantageous for the treatment of some types of cancer, inhibition of Shp1 may have the opposite effect because it acts as a tumor suppressor. In this way, we sought to develop an in silico methodology capable of identifying more selective Shp2 inhibitors. In this work, we showed that in spite of the thermodynamic complexity involved in the enzyme/inhibitor interaction, it was possible to correlate the selectivity of two series (76 compounds) with the difference of enthalpy of interaction calculated in both enzymes. The interaction profile of the inhibitors with Shp2 and Shp1 were initially obtained by molecular docking. After the refinement of the geometries of the enzyme / inhibitor complexes with the semi-empirical molecular orbital PM7 method, the interaction enthalpy values were obtained. For the series 1, composed of 52 selective inhibitors of Shp2, we demonstrated that the enthalpy of interaction can be used as a reliable criterion for the identification of selective inhibitors for Shp2, since it was significantly more favorable for Shp2 than for Shp1 with one confidence level of 99%. For series 2, composed of 24 compounds, a satisfactory correlation (R = 0.70) could be obtained between the selectivity and the relative percentage difference of the calculated enthalpies of interaction in both enzymes. Another objective of this work was to construct a model of prediction of the activity of inhibitors of Shp2 using as empirical basis the series 1 and later to validate with the series 2. Due to the presence of negatively charged inhibitors within the series, it was necessary to consider the electrolytic effect , correcting the experimental values of inhibitory activity, since such data refer to formal concentrations and the thermodynamic constant involves effective concentrations. For this it was necessary to calculate the ionic strength of the reaction medium and to estimate the activity coefficients of the species involved in the enzyme /inhibitor dissociation equilibrium through the Guntelberg equation. The construction of the model was based on literature proposals on the use of thermodynamic cycles to calculate the free energy of interaction between binders and enzymes. In this sense, terms related to the enthalpy of interaction of the enzyme / inhibitor complex, the energy of solvation of the ligand and the entropic losses due to rotational restrictions were obtained after the interaction of the same with the enzyme. These terms were correlated through linear multiple regression with experimental data of inhibition. In this way it was possible to develop a prediction model of the activity of inhibitors of Shp2 with good correlation with experimental data (R = 0.83). This model was validated satisfactorily (R = 0.73) through the series 2 and used in the prediction of the relative activity of new compounds.

3
  • DANILO SOUSA PEREIRA
  • Synthesis of new 1-[N-(4-aminophenyl)-sulfonamide]-thiocabamoyl-Pyrazolines and evaluation of Anti-cholinesterase activity

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • ANA CAROLINA LEAL DE OLIVEIRA
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CEDRIC STEPHAN GRAEBIN
  • LUIZ CARLOS DA SILVA PINHEIRO
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • MARIA RAQUEL GARCIA VEGA
  • ROBERTA KATLEN FUSCO MARRA
  • Data: Mar 29, 2019


  • Show Abstract
  • Alzheimer's Disease (DA) is one of the most common dementias in individuals over 65 years of age. It is a progressive illness that affects the thought, memory, learning and language leading the elderly to dependence on their relatives due to the inability to perform activities in their everyday life. One of the main pathological mechanisms responsible for DA is the intense synaptic degeneration where the neurotransmitter acetylcholine (ACh) suffers hydrolysis in presence of cholinesterase’s enzymes, in particular acetylcholinesterase (AChE). Maintaining the proper functioning of synapses in the central and peripheral nervous system is related to inhibition of these enzymes. Previous researches showed compounds derived from Pyrazoline or Sulfonamide as promising enzyme inhibitors. Therefore, this project aims to hybridize the groups Pyrazoline and Sulfonamide in 20 unpublished compounds for subsequent evaluation of the inhibition capacity of the enzymes AChE and BuChE, involved in synaptic degeneration.

4
  • TAÍS DA SILVA ROSA
  • Effect of Acai (Euterpe oleracea Mart) and PITANGA (Eugenia uniflora L.) Extracts on CATALASE AND GST 
    ACTIVITY IN MOUSE BRAINS AND HEPATOCYTES FOR PROTECTION AGAINST CYTOTOXIC AGENTS.
  • Advisor : CRISTIANE MARTINS CARDOSO DE SALLES
  • COMMITTEE MEMBERS :
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • CRISTIANO JORGE RIGER
  • DIEGO DE MELLO CONDE DE BRITO
  • ALEXANDRE HERCULANO BORGES DE ARAUJO
  • EDUARDO DOS SANTOS SILVA
  • FREDERICO FREIRE BASTOS
  • LAILA NATASHA SANTOS BRANDÃO
  • Data: Jul 3, 2019


  • Show Abstract
  • Several endogenous or exogenous substances can impair the functioning of the organism directly or induce the formation of other harmful compounds, and therefore need to be eliminated. There are diverse pathways and cellular processes that lead the elimination of these compounds. The elimination process of xenobiotic compounds occurs mainly with the participation of biotransformation enzymes such as those belonging to the Glutathione Stransferase (GST) family. On the other hand, reactive oxygen species are eliminated by other action mechanisms that also involve the performance of enzymes, such as catalase. Bioactive compounds present in plants, particularly fruits, are constantly reported as having antioxidant compounds that can act directly in the cell or act as modulators of both biotransformation enzymes and enzymes responsible for the metabolism of reactive oxygen species. In this work, the objective was to determine the modulator capacity of compounds of two high consumption fruits, açaí and brazilian cherry, in modulating the GST enzyme, its mu isoform and the cerebral and hepatic catalase enzyme, in order to verify the possibility of extracts and compounds of these fruits become promising alternatives for enhancing the body's ability to protect against possibly genotoxic agents.The fruits extracts were obtained, crude extract has being extracted with distilled water and fractional extracts: ethereal (petroleum ether), alcoholic (in ethanol, using solid residue resulting from the ethereal extract) and aqueous distilled water, using solid residue resulting from the extraction of ethereal and alcoholic extract). These were tested in enzymatic assays of cerebral and hepatic cytosolic GSTs and catalases of rats, and the results compared with the control assays performed in the absence of extracts. Studies of the inhibition produced by the extracts at various substrate concentrations, such as Michaelis-Menten curves, from the reciprocal double plots, determined kinetic parameters (Km and Vmax) are important to better understand the enzymatic kinetics in the presence of the extracts. It was possible to observe the modulatory capacity of the compounds present in the extracts obtained from these two fruits, differently and depending on the compound, enzyme and /or isoform. GST and catalase were both activated or inactivated by the different extracts tested. By these results, the most expressive for increased GST and hepatic catalase activity, was found with the use of crude and aqueous extracts of açaí. GST and brain catalase were activated by the compounds of the aqueous extract of brazilian cherry. The results obtained with these extracts allow to relate them to the increase of the cellular capacity of reduction of the concentration of xenobiotic compounds in the organism, as well as the possibility of oxidative stress occurrence. This result becomes more important because the crude and aqueous extracts are directly related to the form of direct consumption of the fruits tested. 

5
  • ROMULO CORREIA FERREIRA
  • STUDY OF THE REACTIVITY OF THE TRIPLET EXCITED STATE OF DIMETHOXY XANYHONES EMPLOYING THE  LASER FLASH PHOTOLYSIS TECHNIQUE

  • Advisor : JOSE CARLOS NETTO FERREIRA
  • COMMITTEE MEMBERS :
  • AURELIO BAIRD BUARQUE FERREIRA
  • DARI CESARIN SOBRINHO
  • FABIO DA SILVA MIRANDA
  • FRANCISCO DE ASSIS DA SILVA
  • NANCI CAMARA DE LUCAS GARDEN
  • Data: Jul 22, 2019


  • Show Abstract
  • Studies by UV/Vis absorption spectroscopy, fluorescence emission and 77K phosphorescence emission indicated that the dimethoxylated xanthones 1,2-dimethoxy-9H-xanthen-9-one (1,2MX), 2,3-dimethoxy- 9H-xanthen-9-one (2,3MX) and 3,4-dimethoxy-9H-xanthen-9-one (3,4MX) present triplet excited state with a pp* configuration. Studies by laser flash photolysis (lexc=355 nm) were performed to investigate the reactivity of the triplet excited state of the dimethoxylated xanthones 1,2MX, 2,3MX and 3,4MX toward different types of quenchers. Quenching of 1,2MX, 2,3MX and 3,4MX by 1-methylnaphthalene and 1,3-cyclohexadiene, in acetonitrile, results in the formation of the corresponding triplet excited states through a triplet-triplet energy transfer process controlled by diffusion. The hydrogen transfer reaction of these dimethoxylated xanthones employing alcohols (methanol, ethanol, and 2-propanol) and 1,4-cyclohexadiene occurs through the pure mechanism, with rate constants consistent with the involvement of a triplet excited state with pp* character, confirming the experimental results of the phosphorescence studies. In all cases, the formation of the corresponding ketyl radicals was observed. Using the electron donors DABCO and triethylamine as quenchers of the triplet excited state of 1,2MX, 2,3MX and 3,4MX the formation of the corresponding radical anion by electron transfer was observed. On the other hand, quenching with phenol and its derivatives led to the formation of the ketyl/phenoxyl radical pair, while using indole or the methyl ester of N-acetyl tryptophan (NATME) the ketyl/indolyl radical pair was formed. In all cases, the reaction takes place through a mechanism involving an electron transfer coupled to an ultra-fast proton transfer. Comparing the quenching rate constants for the dimethoxylated xanthones1,2MX, 2,3MX and 3,4MX, it can be concluded that there is no relevant difference between their reactivities. Photolysis of 2,3MX in H2O/acetonitrile solution (1:1 v/v) (lexc=266 nm) resulted in its photoionization with the formation of the corresponding radical cation (lmax~390 nm). The characterization of this radical cation through the use of the nucleophilic quenchers chloride, bromide and acetate leads to quenching rate constants with diffusion-controlled values. Finally, 1,2MX, 2,3MX and 3,4MX were used as photosensitizers for singlet oxygen formation, although presenting very low efficiency (F D1O2: 1,2MX = 0.19; 2,3MX = 0.12 and 3,4MX = 0.06).

6
  • MIRZA NALESSO GOMES SANCHES
  • PHYT0CHEMICAL AND BIOLOGICAL STUDY DE Simira grazielae (Rubiaceae)

  • Advisor : RAIMUNDO BRAZ FILHO
  • COMMITTEE MEMBERS :
  • RAIMUNDO BRAZ FILHO
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • HELENA REGINA PINTO LIMA
  • BRUNO GUIMARAES MARINHO
  • Marise Maleck de Oliveira
  • ROBERTO CARLOS CAMPOS MARTINS
  • TEREZA AUXILIADORA DO NASCIMENTO RIBEIRO
  • Data: Jul 25, 2019


  • Show Abstract
  • The study species Simira grazielae P., is popularly known as arariba-red and is distributed in Brazil by the states of BA and ES. The objective of the present study was to contribute to the knowledge of the chemical composition of S. grazielae, Rubiaceae family, through the phytochemical and pharmacological study of extracts, fractions and secondary metabolites isolated in greater quantity. The vegetal material of the wood and bark was collected in the Forest Reserve of Companhia Vale do Rio Doce - ES, later dried at room temperature, crushed and subjected to the exhaustive maceration process with methanol, without heating. The methanolic extracts were subjected to the liquid / liquid partitions with n-hexane, dichloromethane, ethyl acetate and n-butanol, and a small amount of these partitions, together with the extract, were subjected to chemical prospecting. The fractions collected from the partition were chromatographed on classic silica gel exclusion columns (Sephadex LH-20) and analyzed by 1H and 13C NMR, GCMS and LC-MS-IES. In addition to the fractionation, extracts and partitioned fractions were submitted to the analysis by dereplication in the UPLC-ESY-QTOF-MS/MS system in the positive mode, a fast and precise analysis to characterize the chemical profiles. The chemical prospecting tests showed positive results for the metabolites: saponins, steroids, triterpenoids, purines, coumarin derivatives, alkaloids, reducing sugars, saccharides and non-protein amino acids. Eightenn (18) substances were isolated and identified from the wood of S. grazielae: N-acetyl serotonin, Maxonine, Harmana, cis- N-p-coumaroyl Serotonin, trans-N-p-coumaroyl serotonin, N-isoferuloyl serotonin, N-feruloil serotonin (Moschamine), cis-moschamine, N-cafeloyl serotonin, Higarine, Ofiorin B, Ofiorin A, Strytosidic acid, Strictosidene, Desmethylisopauridiantoside Acid unpublished, mixture Triacylglycerides, 5- hydroxindole-3-aldehyde and 6'-O-vanilloylbarbutine, involving sixteen alkaloids of the indole and β-carbolin class. The dereplication technique and the fragmentation proposals allowed postulating the presence of 30 substances in the Dichloromethane fraction, 38 in the ethyl acetate, 14 in the butanolic and 7 in the residual wood and 21 in the bark extract. Some substances appeared in several fractions. The crude extracts and partitions revealed anti-inflammatory and antinociceptive activity, and the acaricide activity investigated with Rhipicephalus microplus larvae did not provide a positive result. The acetate, butanolic and Ofiorin B fractions showed no inhibition or activation effect in the evaluation of the effect on the enzyme tyrosinase. Thus, in this work the identification of 18 substances isolated from the wood of S. grazielae is registered and it is proposed the additional presence of 54 substances through the technique of deregulation involving mainly alkaloids, in addition to revealing the presence of fractions of the species with anti inflammatory and antinociceptive.

7
  • PATRICIA SARAIVA VILAS BOAS DE ALMEIDA
  • Ru(II) complexes containing coumarin hybrid ligands: Synthesis and evaluation of cytotoxic and antibacterial activities
  • Advisor : AMANDA PORTO NEVES
  • COMMITTEE MEMBERS :
  • AMANDA PORTO NEVES
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • GUSTAVO BEZERRA DA SILVA
  • LEONARDO VIANA DE FREITAS
  • MARCIELA SCARPELLINI
  • MARCO EDILSON FREIRE DE LIMA
  • MARIA DOMINGUES VARGAS
  • Data: Jul 31, 2019


  • Show Abstract
  • Cancer and bacterial infections are diseases that cause a large number of deaths, and despite the existing treatments, drugs being less harmful to the patients and more active against resistant cells are still needed. Coumarin derivatives and several classes of Ru(II) complexes have been studied for their potential as antimicrobial and antitumor agents. For this reason, four novel coumarin-N-acylhydrazone hybrid ligands of the type (E)-7-(diethylamino)-N'-(4-R-benzylidene)-2-oxo-2H-chromene-3-carbohydrazide (HL2: R=H; HL3: R=Cl, HL4: R=Br, HL5: R= OCH3), were obtained from condensation reactions, using one hydrazide (7-(diethylamine)-2-oxo-2H-chromone-3-carbohydrazide, HL1) and different p-substituted aldehydes. Reactions between HL2-5 and cis-[RuCl2(DMSO)4] afforded the complexes trans-Cl-[RuCl2(DMSO)2(HLn)], C2-5 (Ru(II)-Cl-DMSO class). Concomitantly, hydrolysis of the ligand occurred, resulting in the formation of the complex trans-Cl-[RuCl2(DMSO)2(HL1)] C1, containing the hydrazide as ligand. Crystal structures of HL2, HL3 and the complexes C2-5 were determined by single crystal X-ray diffraction, that revealed E/Z isomerization of the coumarin-N-acylhydrazones upon coordination, where the free ligands were found in the E form, and when complexed, the Z isomer was formed. Complexes C2-5 exhibited the Ru(II) atom in a distorted octahedral geometry, where the coumarin ligand is coordinated in the keto form through the hydrazone carbonyl and the iminic nitrogen. Attempting to synthesize a second class of complexes, containing bipyridine as auxiliary ligand and charged, ([Ru(bipy)2(HLn)]PF6 - Ru(II)-bipy class), the reaction between HL2 and cis-[Ru(bipy)Cl2] was carried out. However, the possible hydrolysis of the ligand precluded the isolation of the desired complex. A similar methodology using cumarin-b-ketoester hybrids HL6-8 yielded the complexes from the Ru(II)-bipy class, [Ru(bipy)2(HLn)].PF6 C6-8. The XRD analysis of C7 shows the Ru(II) ion in a distorted octahedral environment with the ligand coordinated through the deprotonated b-ketoester portion and two bypiridines in the coordination sphere. Antiproliferative evaluation of the compounds against the tumor cell lines (4T1: murine mammary carcinoma and B16-F10: murine melanoma melanoma) and non-tumor (BHK-21: hamster kidney) showed that overall, the coumarin-N-acylhydrazone and coumarin-hydrazyde hybrids HL1-5 were more active than the complexes C1-5, where the IC50 values for the ligands were found in the range of 10.6 to 50. 4 mM and between 17.7, and 97.8 mM for the complexes. On the other hand, the coumarin-b-ketoester ligands HL6-8 were inactive (IC50 > 100 mM), yet the complexes C6-8 presented high cytotoxicity, with IC50 values ranging from 2.0 and 12.8 mM. For the antimicrobial assays, HL1 was the only ligand active against one gram-negative bacteria strain, however its MIC was not determined within the studied concentrations. Among the complexes, all demonstrated activity only against gram-positive bacteria strains. Within the Ru(II)-Cl-DMSO complexes, only C3 and C4 (R = Cl and Br) exhibited MIC under the concentrations used (40.5 and 86 μM). On the other hand, the complexes from the Ru(II)-bipy class C6-8 presented MIC between  2.20 and 9.22 μM. Comparing the classes of complexes, Ru(II)-bipy and Ru(II)-DMSO, the greater activities presented by the former in both biological studies was attributed to the presence of charge and of bipyridine ligands. The investigation of DNA interaction of the complexes [Ru(bipy)2(HLn)]PF6 (C6-8) are in progress.

     

8
  • WELLINGTON OLIVEIRA DA CRUZ
  • Biochemical caracterization of digestive proteases in Alphitobius diaperinus (Coleoptera: Tenebrionidea) larvae.

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • DANIELLE MARIA P. DE OLIVEIRA SANTOS
  • EMERSON GUEDES PONTES
  • RAFAEL DIAS MESQUITA
  • Data: Aug 6, 2019


  • Show Abstract
  • Alphitobius diaperinus is considered an important pest in avian environment. The study of its behavior, eating habits and digestive enzymes may indicate important targets in its control. The control of A. diaperinus is considered difficult, its natural enemies are little known and to this day there is no efficient and safe method. The digestive proteases of insects catalyze the production of peptides and amino acids of a protein diet and are found in the middle intestine region of the insects' middle intestine. The objective of this work was to characterize the proteases present in the digestive tract of A. diaperinus. Proteolytic activities were determined using azocasein and specific substrates. The crude extract of the homogenized intestine of A. diaperinus showed activity against azocasein and Abz-Phe-Arg-MCA and was inhibited in more than 50% by the cysteine protease inhibitor E-64 and was activated by DTT 2.0 mM at acid pH, which suggests that the substrates are being hydrolysed by cysteine protease. Nine bands were detected with proteolytic activity and molecular weight in the range 10kDa - 100kDa by zimogram, using 0.1% gelatin as substrate. To determine which classes of proteases were present in the homogenized, classical protease inhibitors such as E-64, iodoacetic acid and acetic acid (cysteine protease inhibitors), PMSF, SBTI, Aprotinin (serine protease inhibitor) and TLCK (cysteine and serine protease inhibitor) were used. The presence of proteolytic activity was observed in all pHs analyzed, but between pHs 5 and 6 a greater potential of activity was registered in relation to the other pHs, corroding with the data found in the literature, where the digestion system of A. diaperinus presents more acid pHs. Although combinations of serine and cysteine proteases were observed, proteases with acid character showed higher levels of proteolytic activity in the model studied. The results observed in a zimogram, using 0.1% gelatin as substrate, in the presence of E-64 inhibitor confirm the presence of cysteine protease in the molecular weight range between 20kDa and 30kDa. Ca2+ ions increased enzyme activity in concentrations higher than 2.0mM and 10mM, in 14% and 34%, respectively. Insects maintained in different diets, both in the formulation and in the concentrations used, showed significant difference in the proteolytic activity determined in the larvae of A. diaperinus. The one-dimensional electrophoretic separation of x intestinal proteins from A. diaperinus larvae, followed by separation, band extraction and analysis of two-dimensional nano-HPLC and ESI-MS/MS resulted in the identification of different classes of proteases.

9
  • LUIZA D'OLIVEIRA SANT'ANA
  • Comparison of analytical methods for the evaluation of the chemical profile of cocaine samples seized in the state of Rio de Janeiro

  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ROSANE NORA CASTRO
  • MARCELO HAWRYLAK HERBST
  • VANESSA GOMES KELLY ALMEIDA
  • ANDRE VINICIUS DOS SANTOS CANUTO
  • ROSANE ALVES FONTES
  • FLAVIO DE ALMEIDA VIOLANTE
  • LEANDRO DA CONCEICAO LUIZ
  • Data: Aug 16, 2019


  • Show Abstract
  • One hundred and fifty samples were analyzed for suspected cocaine content. The samples were seized by Polícia Civil do Estado do Rio de Janeiro from the year 2016 to 2017 on the city of Rio de Janeiro, Baixada Fluminense and Costa Verde, and 102 samples showed powder aspect and 13 samples showed crack aspect. The samples were analyzed for cocaine and adulterant contents and for the identification of diluents. The main objective of this work was to evaluate the chemical profile of cocaine (powder and crack), as well as to compare different analysis techniques. The importance of the identification and quantification of cocaine adulterants relies on their pharmacological properties, adverse effects and synergistic activities with cocaine, possibly increasing the duration of the effects, its intensity and toxicity. Preliminary tests (Scott test, Wagner test, AgNO3 precipitation, iodine / iodide test and acid hydrolysis) were initially conducted to verify the possible presence of cocaine. Cocaine and adulterants were identified and quantified by Gas Chromatography Coupled to Mass Spectroscopy (GC-MS), using commercial standards of caffeine, lidocaine, phenacetin and benzocaine. The cocaine pattern was obtained by purification (> 98%) and was ceded by Prof. DSc. Bruno Sabino (UFRJ / PCERJ). Other adulterants eventually found were identified by Mass Spectrometry with the aid of a commercial library. The detection of diluents (inorganic substances and sugars that are frequently added to cocaine in order to increase yield) was performed by Raman Spectroscopy and Infrared Spectroscopy (FT-IR), using the following commercial standards: calcium carbonate (CaCO3), sodium bicarbonate (NaHCO3), aluminum sulphate (Al2(SO4)3), sodium carbonate (Na2CO3), starch, sucrose, glucose, lactose and mannitol. The capacity to detect cocaine and adulterants by Raman and FT-IR spectroscopy were also evaluated, according to previous quantification performed by GC-MS. It was verified the efficiency of the preliminary tests, the differences between crack and cocaine chemical profiles and possible differences among the three main criminal gangs of the state of Rio de Janeiro. Cocaine was not identified in only two powder samples. It was observed higher cocaine contents in crack samples, showing an average of 29.77 ± 14.54% of cocaine, compared to an average of 7.31 ± 3.39% in powder samples. The most frequent adulterant identified in powder samples was caffeine, that was present in 93% of the samples, while crack samples were majorly adulterated with phenacetin, that was present in 92% of the samples. Calcium carbonate, sodium bicarbonate and starch were the diluents most frequently found in powder samples, which could be identified by associating the two spectroscopic technics (Raman and FT-IR). It could be observed, by statistical analysis, similarities according to the type of the samples (hydrochloride and freebase) as well as significant differences among certain criminal gangs.

10
  • JULIANA PAES LEME DE MELLO SOUSA
  • Study of chemical composition, antioxidant potencial and antimicrobial  activity of Brazilian brown propolis and the application of propolis extracts in sodium carboxymethylcellulose films.

  • Advisor : ROSANE NORA CASTRO
  • COMMITTEE MEMBERS :
  • ROSANE NORA CASTRO
  • YARA PELUSO CID
  • ROBERTO CARLOS CAMPOS MARTINS
  • MARIA RAQUEL GARCIA VEGA
  • DAVYSON DE LIMA MOREIRA
  • Data: Aug 26, 2019


  • Show Abstract
  • Propolis is a natural product that has been used in the treatment of diseases since ancient times. The presence of several phenolic substances explains, in part, the variety of biological and therapeutic properties reported in the literature. Of note are flavonoids, cinnamic acids and their esters. Aiming to expand and produce knowledge about Brazilian propolis, it is necessary to analyze this product in order to determine its identity, its composition and evaluate its effects on health when adopted by the population. The objective of this work was to evaluate the chemical profile, phenolic substances content, antioxidant capacity, comparison of UV-Vis spectral data profiles and antimicrobial activity against staphylococcus aureus of ten samples of  brown propolis (Apis mellifera) obtained from the municipality of Japira north of Paraná. As well as the preparation and characterization of sodium carboxymethylcellulose films impregnated with extracts of brown propolis. The extracts from the propolis samples were prepared using the ethanol solvent P.A (EEP) and methanol P.A (EMP) by four extraction methods: dynamic maceration at room temperature; dynamic maceration at 50ºC; extraction in the ultrasound bath and at room temperature and extraction with ultrasound by immersion probe. It was observed a great variation in the results of the extracts for the yields (% m / m), total phenolics, total flavonoids and antioxidant capacity according to the solvent and the extraction methodology. The extracts of propolis that presented higher contents in phenolics and total flavonoids, do not always present the highest potential antioxidants. The qualitative chemical profile of the propolis extracts were similar and the main substances identified were: chlorogenic, caffeic, ferulic, p-coumaric and rosmarinic, besides flavonoids pinobanksin, canferol, canferide. Although the chemical profile by HPLC-DAD was similar to the chemometric analysis showed difference between the solvents used as well as between types of propolis. Regarding the antimicrobial activity against Staphylococcus aureus, all the propolis extracts tested were effective in promoting inhibition of S. aureus growth in the agar diffusion test. The percent inhibition was similar between the samples. The study of incorporation of propolis with carboxymethylcellulose (NaCMC) was efficient.

11
  • SORAIA JOHN DA SILVA
  • Canine Cognitive Dysfunction: study of new therapeutical and diagnostic approaches for the pathology and contributions to research directed to Alzheimer's Disease.

  • Advisor : CRISTIANE MARTINS CARDOSO DE SALLES
  • COMMITTEE MEMBERS :
  • CRISTIANE MARTINS CARDOSO DE SALLES
  • ANDRE LUIZ GOMES VIEIRA
  • ANDRE MARQUES DOS SANTOS
  • DIEGO DE MELLO CONDE DE BRITO
  • ALEXANDRE DOS SANTOS RODRIGUES
  • MARIO ROBERTO SENGER
  • RAFAEL FERREIRA DANTAS
  • Data: Sep 17, 2019


  • Show Abstract
  • Canine Cognitive Dysfunction (CCD) is a neurodegenerative disorder that affects older dogs and is very similar to Alzheimer's Disease (AD) in humans. Both pathologies are considered multifactorial and present evidence of b-amyloid deposition; oxidative stress; hyperphosphorylation of Tau protein; imbalance in neurotransmitter levels, such as acetylcholine (ACh); among other factors. Since ACh plays a key role in cognitive processes and many AD treatments are based on the use of acetylcholinesterase inhibitors (AChE), this work aimed to evaluate the efficacy of teas, phytochemicals and synthetic compounds in the in vitro inhibition of this enzyme in dogs brain. This first part of the paper composes chapter 1 of this thesis. The tea of Peumus boldus presented prominence in this study proving effective in the inhibition of this enzyme and with significant antioxidant potential. The phytochemical quercetin and synthetic compounds Cum3 and Cum4 have stood out as competitive inhibitors of AChE activity. The effect of these compounds, as well as of boldo tea, on the serum activity of butyrylcholinesterase (BChE) in dogs was also evaluated. However, all treatments were more effective in inhibiting brain AChE activity than BChE activity in serum. In order to evaluate the effect of CCD on blood enzymes in dogs, blood samples from 48 dogs divided into 5 groups were evaluated: control, risk group, mild DCC, moderate DCC, severe DCC. This part of the paper composes chapter 2 of this thesis. The enzymes evaluated were cholinesterases (using as substrate acetylthiocholine or butyrylthiocholine) and two enzymes of the antioxidant system: catalase and glutathione S-transferase. Although there was no significant difference between the activities of these enzymes in the five groups studied, it was possible to observe changes in the average activities of cholinesterases (using acetylthiocholine as substrate), catalase and GST. These differences show that although such enzymes are not shown to be suitable as CCD biomarkers, they may in future be used as adjuvants in the analysis of disease evolution and in the assessment of response to treatment used. The results obtained in this study, although still early, are promising and may contribute to an advance in the studies of new forms of diagnosis and treatment of CCD.

12
  • JOANA D’ARC DA SILVA TRINDADE
  • STUDIES IN THE REPOSITIONING OF THE DRUG NIMESULIDE FOR THE TREATMENT OF CHAGAS DISEASE: SYNTHESIS OF DERIVATIVES, EVALUATION OF THE TRIPANOCIDAL ACTIVITY AND INVESTIGATION ON POSSIBLE MECHANISMS OF ACTION

  • Advisor : MARCO EDILSON FREIRE DE LIMA
  • COMMITTEE MEMBERS :
  • MARCO EDILSON FREIRE DE LIMA
  • ROSANE NORA CASTRO
  • LUCIA HELENA PINTO DA SILVA
  • ALEXANDRE MORROT
  • JADEL MULLER KRATZ
  • DEIVID COSTA SOARES
  • WANDA PEREIRA ALMEIDA
  • Data: Oct 17, 2019


  • Show Abstract
  • Chagas disease is treated only by two drugs, nifurtimox (1) and benzonidazole (2). However, these two nitroaromatic drugs are not effective in all stages of the infection. Furthermore, both drugs cause severe side effects, which justifies the search for new therapeutic alternatives to treat this serious parasitic infection. Literature data describe the interference of non-steroidal anti-inflammatory drugs on Trypanosoma cruzi trypomastigote infection process on mammalian cells. The mechanism of action of these drugs involves their action on the enzymatic cyclooxygenase complex, which is an important event for the establishment of the parasitic infection. Additionally, the toxic effects of nitro-aromatic compounds are well known and T. cruzi is greatly affected by the action of these molecules in their redox equilibrium. From this information, we proposed in this work the investigation of the trypanocidal activity of the nimesulide (3), a non-steroidal anti-inflammatory drug, which has in its structure a nitro-aromatic group. The drug repositioning approach is an important tool in the discovery of drugs applicable to the treatment of neglected diseases. Another strategy, developed in this work, involved the use of molecular hybridization strategy in the design of two nimesulide derivatives (3), hybrids of nimesulid and the trypanocidal natural amide, piperine (5). The results obtained from the biological evaluations carried out herein indicated the antiparasitic activity of nimesulide (3) on the different evolutive forms of T. cruzi. In addition, the two molecular hybrids constructed, the hybrid H1, in which the aromatic nitro portion was preserved, presented trypanocidal action, while the hybrid H2 significantly lost activity due to the absence of the nitro group. The set of results obtained in this work pointed out the nitro substituent present in the structures of both nimesulide (3) and the hybrid H1 as a pharmacophoric group on the trypanocidal activity exhibited by both, validating the hypothesis of this study.

13
  • DÉBORA RAMOS DE OLIVEIRA
  • Phytochemical study of species of genus Urochloa (Poaceae) and contributon to the study of Cespedesia spathulata (Ochnaceae)

  • Advisor : MARIO GERALDO DE CARVALHO
  • COMMITTEE MEMBERS :
  • MARIO GERALDO DE CARVALHO
  • LUCIANO RAMOS SUZART
  • ALAÍDE DE SÁ BARRETO
  • LISIEUX DE SANTANA JULIÃO
  • MARIA RAQUEL GARCIA VEGA
  • Data: Dec 16, 2019


  • Show Abstract
  • The chromatographic techniques applied to Uroclhoa ruziziensis extracts and partitions, together with the application of physical methods of organic analysis, allowed the isolation and identification of eight substances, among them the organic acids already known in the genus, one flavonoid, tricin, and two steroidal saponins, dioscin and collettinside III, and the triterpene saponins 3-O-β-D-glycopyranosyl sitosterol and 3-O-β-D-glycopyranosyl stigmasterol. In addition to the classical phytochemical study the crude extracts of U. ruziziensis and U. humidicola were analyzed by dereplication using UPLC-MS (Ultra Performance Liquid Cromatography). Their profiles were compared, being common the presence of diosgenin and penogenin skeleton saponins, together the sugar type unities rhamnose and glucose. In the species U. ruziziensis it was possible to identify seven more substances, among them four flavonoids, carinoside, schaftoside, isoschaftoside and ombuin 3-O-rutinoside. The saponin dioscin and / or collettinside III, that were also identified during chromatographic isolation and protodioscin and penogenin 3β- O- β-D-glucopyranosyl-[(2-1)-O-α-L-rhamnopyranosyl-(4- 1)-O-α-L-rhamnopyranosyl. In U. humidicola it was possible to identify, through dereplication, five substances. Tricetin derived flavonoid, tricetin 7-methyl-ether-3’-O-β-D-glucosyl-5’-O-α-L-rhamnoside and the suggestion of unprecedented tricetin 4’-O-β-D-glucosyl-[(2-1)-α-rhamnosyl-(4-1)-α-L-rhamnopyranosil]. The saponins Pariphyllin A, Solanigroside H and 3-O-β-D-glucopyranosyl-(1-4)-α-L-rhamnopyranosyl-(1-4)-β-D-glucopyranosyl-(1-4)-[α-L-rhamnopyranosyl- (1-2)]-β-D-glucopyranosyl spirost-5-eno. Specific differences were noticed mainly in the flavonoid types presente in both, since in relation to the metabolite classes we expected the identification of steroidal saponins and flavonoids.

    The contribution to the phytochemical study with the species Cespedesia spathulata, allowed expanding the knowledge regarding the phytochemical composition of the species. In addition to the ochnaflavone biflavonoid already identified, chromatographic processes and physical analysis methods allowed to the identification of additional twenty six substances. The ethyl acetate partition, derived from the raw leaf extract of this species, and the ochnaflavone, catechin and epicatechin mixture, isolated from the same partition, had their enzymatic influencing potential tested against the action of the tyrosinase enzyme. Both partition and catechins showed activation on the action of the enzyme, 104% and 384%, respectively.

14
  • ARTHUR VALBON RODRIGUES
  • Synthesis of Schiff bases, polyvinylpyrrolidone and plant extract as green carbon steel corrosion inhibitors in acid medium

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CLEBER BONFIM BARRETO JUNIOR
  • DARI CESARIN SOBRINHO
  • GUILHERME PEREIRA GUEDES
  • SHEILA PRESSENTIN CARDOSO
  • Data: Dec 16, 2019


  • Show Abstract
  • Corrosive processes are spontaneous and occur by the chemical or electrochemical action of the environment, generally promoting the degradation of metallic materials or not, which may be intensified by mechanical efforts. Corrosion is a harmful phenomenon for industries, buildings, road and rail bridges, homes and others. In industry corrosion acts by affecting the physical and chemical properties of metal or its alloys, making them unsuitable for the proper maintenance of industrial activities due to the risk of accidents, product contamination, environmental disasters, etc. Industrially applied metal structures are often exposed to means that facilitate corrosive processes, such as seawater and soil, and are damaged early enough, causing significant damage. Due to the numerous damage caused by corrosion, the development of increasingly effective methods of protection becomes necessary. As with other corrosion prevention techniques, the use of inhibitory agents has been a very promising alternative and organic inhibitors show significant efficiency. Inhibiting agents are substances which, when added to the corrosive medium, prevent or slow the development of corrosion reactions. To evaluate the inhibition efficiency in addition to the gravimetric mass loss technique, electrochemical techniques such as electrochemical impedance spectroscopy (EIS), linear polarization resistance (RPL), potentiodynamic polarization (PP) are used. Scanning electron microscopy and molecular modeling are also used to help understand the corrosion inhibition process.

2018
Dissertations
1
  • ESTHER SARAIVA AREAS
  • Synthesis of novel cobalt complexes containing coumarin-b-ketoester hybrid: investigation of the cytotoxicity and reactivity in solution

  • Advisor : AMANDA PORTO NEVES
  • COMMITTEE MEMBERS :
  • AMANDA PORTO NEVES
  • MARCELO HAWRYLAK HERBST
  • MAURÍCIO LANZNASTER
  • Data: Feb 1, 2018


  • Show Abstract
  • In this work it was synthesized novel cobalt complexes containing a fluorescent hybrid ligand of coumarin-b-ketoester (HL) of the type [Co(L)(Am)](ClO4)n, where L is a coumarin derivative in its anionic form and Am is the auxiliary amine: TPA (for 1b-CoII and 2b-CoIII) or Py2en (for 2c-CoIII). The synthetic procedure to obtain 1b led to the formation of the CoII specie (1b-CoII), which was confirmed by CHN elemental analysis, molar conductivity and X-ray diffraction (XRD). The 1b-CoII ion complex is a cationic hexacoordinated specie, containing the coumarin in the L1- form, acting as O,O-donor, and a neutral TPA as N,N',N',N'-donor. XRD results obtained for HL and 1b-CoII showed that the complexation led to the increase of ligand planarity. For 2b-CoIII, the use of [CoIII(TPA)Cl2]ClO4 as a starting material led to the formation of the CoIII complex, however, CHN elemental analysis and 1H NMR also indicated the presence of the precursors in the isolated solid. The complex 2c-CoIII was obtained from the same methodology used for 1b-CoII, however, the presence of a more basic amine (Py2en) favored the CoIII specie. Elemental analysis, molar conductivity, infrared and 1H NMR spectroscopy data indicated a structure of the type [CoIII(L)(Py2en)](ClO4)2, where L1- also interacts with the metal through the carbonyl groups of the b-ketoester moiety. DFT calculations showed that the band at 448 nm in the UV-Vis spectra of 1b-CoII, obtained in buffer solution (pH 7,4), refers to the p-p* transition centered on L1-, and for 2c-CoIII the band at 455 nm is related to a mixture of p-p* and LMCT transitions. Cyclic voltammetry showed that the complexes exhibit a quasi-reversible process associated with the CoIII/CoII pair, with Epc in the order 2c-CoIII < 1b-CoII < 2b-CoIII, which was associated to the electronic properties of the auxiliary amine. The higher p-acceptor character of the TPA facilitates the electron gain by the cobalt in 1b-CoII and 2b-CoIII, while Py2en, which has a larger s-donor character, leads to a lower potential for 2c-CoIII. HL exhibits a cathodic process associated to the reduction of the carbonyl groups, which did not shift after coordination. Reactivity assays of 2c-CoIII in buffer solution (pH 7,4) monitored by fluorescence spectroscopy indicated that the ligand was released in the presence of a reducing agent (sodium ascorbate) for 8.5 h, which was most pronounced in argon atmosphere, suggesting that dissociation of L1- occurs preferentially after reduction of the metal. 2c-CoIII was stable in buffer solution without reducing agent. The cytotoxicity investigation of HL, 1b-CoII and 2c-CoIII against B16-F10 (metastatic murine melanoma), 4T1 (murine mammary melanoma) and BHK-21 (non-tumor cell of hamster kidney) showed that the free ligand was not active, but the coordination favored its cytotoxicity in most cases. 2c-CoIII exhibited the best overall activity when compared to 1b-CoII, presenting selective cytotoxicity to cancer cells (45.9 ± 5.2 mM e 39.1 ± 6.6 mM para B16-F10 e 4T1, respectively) and being inactive against normal cells (71.2 ± 6.2 mM).

2
  • NEUBI FRANCISCO XAVIER JUNIOR
  • CONFORMATIONAL ANALYSIS AND UNIMOLECULAR REACTIONS OF GLYCINE AND ITS RADICAL CATION

  • Advisor : GLAUCO FAVILLA BAUERFELDT
  • COMMITTEE MEMBERS :
  • ANTONIO MARQUES DA SILVA JUNIOR
  • Enio Frota da Silveira
  • GLAUCO FAVILLA BAUERFELDT
  • GRACIELA ARBILLA DE KLACHQUIN
  • LEONARDO BAPTISTA
  • ROBERTO BARBOSA DE CASTILHO
  • Data: Feb 19, 2018


  • Show Abstract
  • The origin of life is one of humanity’s most ancient questions. Studies about the source of the first biologicals molecules have a possibility to bring some answers. Hence, the behavior of biologicals molecules in the ISM (interstellar medium) have great importance because space has hostile conditions similar with Primitive Earth`s atmosphere. Glycine is the smallest amino acid and one of the responsible for the first peptidic bonds in the planet. Despite low temperature and vacuum conditions, solid phase glycine is predominant in ISM. High energy phenomenons, like photons and electrons impact, is one of the mechanisms that promote, in ISM, the transport of a glycine fraction to gas phase. Therefore, the glycine structure and reactivity understanding, in a isolated system, become an important contribution to science. This work showed a conformational analysis and gas phase decomposition description for glycine, while in a isolated system. Those high energy phenomenons can also make desorption to occur accompanied with ionization, hence, calculations about possible conformers and decomposition reaction for glycine cation radical also were made. Theoretical calculations using the B3LYP functional 6-31++(d,p) and 6-311++(2d,2p) basis set, together with single-point calculations in CCSD(T) level of theory, for a better description of electronic energy. Rate constants for reactions have been made in different temperatures, since near to absolute zero, until ambient temperature (300K), adopting the canonical variational transition state theory. In order to still mitigate the ISM conditions, microcanonical variational rate constants have been made. Glycine conformational analysis were studied throughout a thermodynamic and kinetic interconversion scheme, making possible that the conformer that most likely will be most present in the decomposition channels. Interconversion barriers, starting from the lower energy conformer, were bigger than RT value on studied temperatures. Calculated rate coefficients, at 300K, showed a value in 10-34 s-1 order of magnitude for decarboxylation and 10-17 s-1 for deamination. Most favorable decomposition channel, including dissociations, is the deamination. The integrated kinetic study for interconversion and unimolecular reactions showed that reactions does not start from most stable conformer and there is a low probability that reactions occur at low temperatures. In cation radical form, it was characterized a smaller number of of conformers, once that, in cation radical, the NH2 group showed planar. Only the decarboxylation saddle point were characterized for the ionized form, with a barrier height of 56 kcal/mol, while among the dissociations, the channel with HOCO and (CH2NH2)+ products showed a lower dissociation channel, of 53,04 kcal/mol. Beside that, this study suggests that cation radical is the most possible intermediate for this amino acid decomposition in ISM conditions.

3
  • GABRIELA CARMELINDA MARTINS DOS SANTOS
  • Development of fipronil tablets for dogs: pharmacokinetics and ectoparasiticidal efficacy

  • Advisor : YARA PELUSO CID
  • COMMITTEE MEMBERS :
  • RAQUEL RENNO BRAGA
  • VANESSA GOMES KELLY ALMEIDA
  • YARA PELUSO CID
  • Data: Feb 27, 2018


  • Show Abstract
  • Fipronil (FIP) is an insecticide belonging to the class of phenylpirazoles. It is widely used as an insecticide in agriculture and in veterinary medicine. Its mechanism of action is involved with blocking the signal transmission due to the γ-aminobutyric receptor antagonism (GABA) present in acari and insects. Increased human-pet interaction makes concern for the prevention and treatment of flea and tick infestations. The products commercially available for ectoparasites treatment in dogs and cats are mostly in the topical form, however they are associated with damage to the animal, owner and to the environment, due to uncontrolled exposure to the drug, leading to requirement of new product development. Pharmaceutical forms for oral administration of drugs are most common used for the convenience they provide, constituting a non-invasive route of administration and having a low cost. The objective of the study was the pharmacotechnical design and physical-chemical quality control of immediate release tablets of fipronil, as well as to determine its pharmacokinetics and the ectoparasiticide efficacy in dogs. The results showed that it was possible to produce FIP tablets according the criteria established in the Brazilian pharmacopoeia. In vitro release studies have shown that the best diluent to be used in tablet development is lactose due to the appropriate release profile for immediate release tablets. FIP administered orally at the dose of 2 mg / kg reached the systemic circulation (Cmax = 2.17 μg / mL) and was fast absorbed (tmax = 2.67 h) and metabolized, once its SULF metabolite presented Cmax = 1.32 μg / mL in a tmax = 3.5 h. Both elimination, FIP and SULF occurred slowly (t1 / 2 = 385.93 h) and (t1 / 2 = 385.93 h) respectively, maintaining quantifiable plasma levels in the blood for up to 28 days after treatment. The in vivo ectoparasiticide efficacy tests proved that FIP administered orally at the dose of 2 mg / kg had a efficacy of 80% against C. felis felis for 15 days after treatment but it did not show any efficacy against R. sanguineus.

4
  • DURVAL REIS MARIANO JUNIOR
  • Optimization of Analytical Methodology to Evaluate the Extension of Cocaine Contamination in Real 
    Circulating Banknotes in the Municipality of Seropédica-RJ
  • Advisor : VANESSA GOMES KELLY ALMEIDA
  • COMMITTEE MEMBERS :
  • VANESSA GOMES KELLY ALMEIDA
  • JOSE GERALDO ROCHA JUNIOR
  • YARA PELUSO CID
  • CARLOS EDUARDO RODRIGUES DE PAULA
  • NATÁLIA GUIMARÃES DE FIGUEIREDO
  • Data: Apr 4, 2018


  • Show Abstract
  • Cocaine is a tropical alkaloid extracted from Erythroxylon coca, popularly known as coca. It represents 80% of the total alkaloids found in coca. Approximately 18.8 million people aged 15-64 years have used cocaine at least once from 1998 to 2014. Cocaine hydrochloride, one of the forms of cocaine presentation, is the salt of highly soluble cocaine In water, which causes its administration to be nasal, aspirating the powder, or intravenous. It is a white, odorless powder, being of high value in the market because it is an expensive refining product, encouraging adulteration. Paper money is contaminated with cocaine, due to its use as a tool in drug use and the handling of traffickers. Many users use the ballots to inhale the powder, forming a straw. For this reason, it is important to determine the presence of traces of this drug in the notes, such as forensic evidence in attempting to relate the user and the drug. In this work, the High Performance Liquid Chromatography technique with UV-VIS detector is presented for the analysis of banknotes collected in the municipality of Seropédica, Rio de Janeiro. For the extraction of cocaine from the banknotes, ultrasonic bath is used, showing recovery rates of up to 95% when diluted acetic acid is used as solvent extractor. The method presented linearity from 1 to 100 mg / L, with limits of detection and quantification of 0.141 and 0.428 mg / L, respectively. The method of extraction and analysis are proving satisfactory, and the work will continue with the analysis of real samples of banknotes collected in the local commerce.

5
  • ISABELA DE PAULA LIMA
  • Bioanalytical method for quantification of Doxycycline in canine plasma: development, validation and application in pharmacokinetic studies. 

  • Advisor : YARA PELUSO CID
  • COMMITTEE MEMBERS :
  • YARA PELUSO CID
  • ROSANE NORA CASTRO
  • LAIS BASTOS DA FONSECA
  • Data: Jul 18, 2018


  • Show Abstract
  • Doxycycline is an antimicrobial agent from the tetracycline family that acts inhibiting the synthesis of bacterial proteins by binding, principally, to the 30S subunits of bacterial ribosomes, preventing the access of the aminoacetyl-tRNA to the receptor site in the mRNA-ribosome complex. It is often the choice for the treatment of canine Ehrlichiosis. Currently, doxycycline is available in the veterinary market under the pharmaceutical forms: tablet and suspension. It is a class well studied, in the literature are easily found articles describing the methods of analysis for determination of the components of this class in human plasma, however, in canine plasma the methods described by HPLC-UV are scarce, having microbiological methods being more used. In this work, a method was developed and validated for the determination of doxycycline in canine plasma. The samples were submitted to liquid-liquid extraction with low temperature partitioning (LLE/LTP) followed by separation by reverse phase liquid chromatography (RP-LC), using as the mobile phase acetonitrile / water adjusted to 2.5 with oxalic acid (80:20 v/v), the gradient flow between 0.8-1.0 mL/min, with ultraviolet (UV) detection at 357 nm. Oxytetracycline was used as internal standard (IS). The validation of the method showed selectivity, sensitivity, absence of matrix and residual effects, and stability. The linearity of the method was established in the range of 0.5-10 μg/mL (r > 0.99), with lower limit of quantification (LLOQ) in 0.5 μg/mL. Intra- and inter-day accuracy presented CV values of less than 20% for LLOQ and 15% for other quality control samples and intra and inter-day accuracy values expressed in RSE, presented in the range of ±20% for LLOQ and ±15% for the other quality control samples. The method was fully validated, taking into account all the parameters of ANVISA's legislation. The methodology was applied for analysis of comparative pharmacokinetics of doxycycline administered orally from two solid dosage forms: chewable tablet and commercial tablet (Doxifin®). Administration of these formulations reached, respectively, blood circulation (Cmax = 1.11 and 1.16 μg/mL), being absorbed (tmax of 240 and 195 minutes) and eliminated (t½ = 1106.24 ± 130.41 and 1685.919 ± 726.44 minutes) rapidly. The similarity in the plasma profiles of the two formulations tested was observed and bioequivalence was confirmed by statistical tests.

6
  • CARLA CRISTINA DA SILVA
  • Synthesis and antibacterial activity of aminoderivados of the 1.4-naphthoquinone

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CLEBER BONFIM BARRETO JUNIOR
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • MARIA RAQUEL GARCIA VEGA
  • ROSANE NORA CASTRO
  • Data: Aug 15, 2018


  • Show Abstract
  • Bacteria are unicellular beings that can be found alone or in colonies. In the 19th century, scientists began to associate some diseases with certain species of bacteria. Researchers have since sought compounds capable of acting on these species of bacteria and minimizing the effects of diseases, some of which are considered serious. Several classes of compounds have been discovered throughout the 20th century capable of inhibiting the growth or even causing the death of pathogenic bacteria. However, the large capacity of these mutated bacteria led to the emergence of strains resistant to these substances. Thus, the development of new compounds with antibacterial potential is necessary. In this work 11 compounds were synthesized from the reaction of 1,4-naphthoquinone and 11 different amines. The compounds obtained were characterized by infrared and 1H and 13C NMR spectroscopy. Six compounds were selected for biological assay against 9 strains of different bacteria, the NQA, NQC and NQG compounds being active against several different bacteria, in concentrations that varied between 31.2 and 250 mg / mL. For the compounds that showed better activity, the interaction with serum human albumin, a protein present in large numbers in the higher mammals and responsible for the transport of biologically active molecules, was tested.

7
  • THIAGO MOREIRA PEREIRA
  • SYNTHESIS AND PHARMACOLOGICAL EVALUATION OF NEW HYBRID CUMARINIC DERIVATIVES PLANNED AS THERANOSTIC PROTOTYPES FOR ALZHEIMER'S DISEASE

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • FERNANDO DE CARVALHO DA SILVA
  • MARCO EDILSON FREIRE DE LIMA
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • RENATA BARBOSA LACERDA
  • Data: Sep 20, 2018


  • Show Abstract
  • Alzheimer disease (AD) is a common neurodegenerative disease and is considered the most common form of dementia.  According to ONU, due to increase in life expectancy of the world population, the number of people with dementia will grow, achieving 82 million in 2030 and 152 million in 2050. Therefore, AD is considered an important public health problem.

    Between the main pathological mechanisms involved in the characteristics lesions of DA studied are protein TAU hiperfosforilation, Ab aggregation, neurovascular disfunction, inflammatory process, oxidative stress, cellular cycle alterations and mitochondrial disfunction. The knowledge of these disturbances has lead to development of drugs with symptomatic effects, approved in many countries, but these drugs act only on the behavioral state, however, advances in the research of pathogenic of AD also has lead to potential disease modifying agents in clinical trials.

    Another approach with pharmacokinetic/dynamic and exams of molecular image give rise to the theranostics. This approach of treatment for AD includes therapeutic properties and diagnosis, in only one prototype, with the aim of optimizing the efficacy of drug therapy. In this context of compounds which can act as diagnosis sensor, coumarins show to be an excellent prototype of theranostic agents due to luminescence properties and the large number of pharmacological activities.

    Coumarins are natural products widely found in nature and which has an important effect in plants physiology. In the literature, there are many examples of coumarins used for treat AD and as optical sensors of metals applied in biological medium.   

    The objective of this work comprises the planning of hybrids coumarins fluorescents which can act as theranostic for AD. Two coumarin series were synthesized and fully characterized. The first series of compounds (CCM) was synthesized by two different protocols of synthesis. Five compounds were selected (59b-e,i) and its photophysical characterization in methanol and water was evaluated. Additionally, the compounds 59a-b showed the ability to act as Zn2+ probe in these same solvents.

    The second series (HM) was synthesized in four steps, and the compounds 60a-b and 59a-b showed excellent values of inhibitory activities against AChE (12,94nM-128,28nM), very similar to drug Donezepil (6,55nM). The hybrid 60a was still evaluated for the capacity to binding Zn2+ in water (pH = 7,4), validating the propose of this work to produce hybrids which can act as theranostic for AD.  

8
  • GABRIELA ALVES DE SOUZA
  • Synthesis of Alkylamino-Coumarin Compounds Designed as Acetylcholinesterase and β-Amyloid Plate Aggregation Inhibitors for the Treatment of Alzheimer's Disease

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • MARIA LETÍCIA DE CASTRO BARBOSA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • Data: Nov 21, 2018


  • Show Abstract
  • Alzheimer's disease (AD) is a neurodegenerative disorder that causes a general, progressive and irreversible deterioration of several cognitive functions (memory, attention, concentration, language, thought, among others), making it difficult to perform daily activities. The use of hybrid compounds for the treatment of AD with inhibitory potential for more than one target, such as the acetylcholinesterase enzyme (AChE) and the aggregation of β-amyloid plaques (Aβ), is very promising, due to the possibility of inhibiting simultaneously two or more factors that contribute to the establishment and evolution of the disease. AChE modules the levels of the neurotransmitter acetylcholine (ACh) in the synaptic cleft, factor that is involved in the learning and memory processes. The aggregation of Aβ plaques isone of the main causes for neuronal death. Thus, this work aims on the synthesis of coumarin compounds analogous to alkylamino-indanone prototypes, described as inhibitors for both AChE enzyme and Aβ plaques aggregation. The disign of the series was based on: 1- the maintenance of the cyclic alkylamino group; 2- in the exchange of the indanone nucleus by the coumarin, through nonclassical isosterism of ring expansion. The synthesis of compounds involved: O-alkylation of 7-hydroxycoumarin; bromination at the 3-position of the 7-bromoalkoxycoumarins; amination of the alkyl chain of 3-bromo-7-bromoalkoxycoumarins; Suzuki coupling reaction of the 3- bromo-7-aminoalkoxycoumarins; Buchwald coupling reaction of the 3-bromo-7-aminoethoxycoumarins; all reactions presented regular to good yields. After purification, the characterization of compounds by spectroscopic techniques (1H and 13C NMR) and high resolution mass spectrometry confirmed the products. All synthesized compounds were able to inhibit AChE selectively against BChE, in which the most active compound presented IC50 = 19 nM and selectivity of 354 (BChE IC50 / AChE IC50), acting very similarly to reference drug donepezil (AChE IC50 = 2 nM and selectivity of 365). Additionally, the compounds showed mixed inhibition profile for both cholinesterases, which was corroborated by molecular docking analyzes that demonstrated the interaction of the compounds with the catalytic (CAS) and peripheral (PAS) sites.

Thesis
1
  • HENRIQUETA TALITA GUIMARÃES BARBOZA
  • Synthesis, characterization and study of the fungicidal and antitumor activity of

    new dialkylphosphonylacylidrazones

  • Advisor : JOAO BATISTA NEVES DA COSTA
  • COMMITTEE MEMBERS :
  • JOAO BATISTA NEVES DA COSTA
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • MARCO EDILSON FREIRE DE LIMA
  • REGINA CELI CAVESTRE CONEGLIAN
  • ANTONIO GOMES SOARES
  • OTNIEL FREITAS SILVA
  • MARCOS COSTA DE SOUZA
  • Data: Apr 26, 2018


  • Show Abstract
  • The present work refers to the synthesis of novel dialkylphosphorylacylhydrazones that occurs in 3 reaction steps: the first step consisted in the synthesis of different dialkyl acetate phosphonoacetates obtained by the reaction of the ethylbromoacetate with the trialkyl phosphite of interest. The second step was the synthesis of acetic diethoxyphosphonylhydrazides which occured by reaction between dialkyl phosphonoacetates synthesized and hydrazine. The third and final ones occured by the condensation of acetic diethoxyphosphonylhydrazides with different heterocyclic aldehydes. The obtained compounds were characterized by 1-H and 13-C and 31-P NMR, infrared (IR) and mass spectroscopy (MS). In total, 17 unpublished compounds, namely one to 17, respectively, were obtained with diastereoisomeric mixture of preferential conformation E. The fungicidal activity of each synthesized molecule was tested against plant pathogens fungi responsible for postharvest diseases of economic importance such as Pilidium sp., Alternaria sp., Penicilium sp. and Colletotrichum gloeosporioides, however, they did not present fungicidal activity in the evaluated fungi. The compounds were further tested on melanoma cells, for the purpose of verify whether they have any activity in tumor growth of melanoma cells, but only compounds 2 and 10 showed some biological activity, although relatively low.After synthesis and purification of the synthesized compounds, they are checked against the acetylcholinesterase enzyme activity. The AChE enzyme inhibition assay has shown that compound 2 does not inhibit the enzyme along with compounds 3, 7, 8 and 16 while compound 13 in addition to compound 9 strongly inhibits AChE and even more inhibitors than the standard used, the Propoxur.

2
  • NATÁLIA DRUMOND LOPES
  • Synthesis and evaluation of the biological activity of mesoionic compounds of the 1,3,4-thiadiazolium-2-arylaminides class

  • Advisor : AUREA ECHEVARRIA AZNAR NEVES LIMA
  • COMMITTEE MEMBERS :
  • ALESSANDRO BOLIS COSTA SIMAS
  • ANDRESSA ESTEVES DE SOUZA
  • AUREA ECHEVARRIA AZNAR NEVES LIMA
  • CEDRIC STEPHAN GRAEBIN
  • EDSON FERREIRA DA SILVA
  • KENIA PISSINATE
  • WELISSON DA SILVA FERREIRA
  • Data: Jun 26, 2018


  • Show Abstract
  • Cancer is a public health problem, being considered the second largest cause of death in Brazil. Currently, the therapeutic methods used against cancer are based on surgery, radiotherapy and chemotherapy. Although chemotherapy has been being improved recently, several types of cancer still do not have systemic and adequate treatment, such as melanoma and ATL, making it necessary to find new, more efficient and less toxic antineoplastic agents for healthy cells in order to improve the effectiveness of treatment of these diseases. Considering this scenery, heterocyclic compounds are shown to be promising substances for antitumor activity, including mesoionic compounds. In this work the synthesis of 4 series of mesoionic compounds of the class 1,3,4-thiadiazolium-2-arylaminide in the form of hydrochlorides is presented, resulting in 24 compounds in total, of which 20 are unpublished. The synthesis methodology for the serie I was oriented from the principles of Green Chemistry, performing reactions in absence of solvent and use of microwaves from piperonal derivatives and substituted thiosemicarbazides in yields between 60 and 95%. The compounds of series II, III and IV were obtained from chlorides of substituted cinnamic acids and thiosemicarbazides also substituted in 1,4-dioxane under reflux in satisfactory yields. All synthesized compounds were characterized by IR, 1H and 13C NMR spectroscopic techniques confirming the proposed structures. The compounds of series I were evaluated for inhibition of the enzyme tyrosinase, a biological marker for melanomas. The results obtained were promising for tyrosinase inhibitory activity for derivatives 16 (IC50 = 124 μmol L-1) and 17 (IC50 = 358 μmol L-1). The study of interaction with human serum albumin, as well as molecular modeling studies, were performed for these compounds confirming the results obtained in vitro. The compounds of series II were evaluated for cytotoxic activity against three human leukemia lines (Jurkat, MT2 and K562) showing good results for compounds 18 and 22, whereas the assays for the other compounds are in progress with promising preliminary results. The results obtained in this thesis indicate that mesoionic compounds can be used as prototypes for new agents in cancer chemotherapy.

3
  • CHRISTIAN MARCELO PARAGUASSU CECCHI
  • OXIDATION OF METHYL ESTERS OF FATTY ACIDS BY NIOBIUM OXIDE (V). A STUDY ON THE REACTIVITY OF THE CATALYST SURFACE

  • Advisor : JOSE CARLOS NETTO FERREIRA
  • COMMITTEE MEMBERS :
  • ANGELA SANCHES ROCHA
  • ANTONIO MARQUES DA SILVA JUNIOR
  • AURELIO BAIRD BUARQUE FERREIRA
  • CARLOS EDUARDO RODRIGUES DE PAULA
  • CRISTIANE HESS DE AZEVEDO MELEIRO
  • ELIZABETH RODITI LACHTER
  • HELIO FERNANDES MACHADO JUNIOR
  • MARCELO HAWRYLAK HERBST
  • RODRIGO JOSÉ CORREA
  • Data: Aug 17, 2018


  • Show Abstract
  • The catalytic properties of niobium oxide (V) (Nb2O5-CBMM) of different degrees: amorphous, optical and ultra-pure, untreated or heat treated at 400, 500, 700 and 900 ° C were studied, before and after the interaction with hydrogen peroxide (H2O2), by UV-Visible spectroscopy in diffuse reflectance mode, Raman and FTIR-ATR. The presence of different reaction sites for the NbO7 and NbO8 type systems, which are directly related to the surface defects present in different states of crystallization, was totally characterized. The reactivity of different catalysts obtained from the niobium oxide (V) was investigated using methyl linoleate oxidation in the presence of H2O2 as a probe reaction. The reaction was monitored by GC-MS, as well as by 1 H and 13 C NMR spectrometry, with the dominant product of the reaction being 9-oxo-nonanoic acid methyl ester. Based on these results, a reaction mechanism was proposed involving an auto-oxidation process that initially leads to the formation of hydroperoxides that decompose rapidly via a Hock-like rearrangement, leading to the formation of aldehydes.

4
  • CARLOS HENRIQUE CORREA DOS SANTOS
  • Secondary metabolites and evaluation of biological activities of Siolmatra brasiliensis (Cogn.) Baill. (Cucurbitaceae) and species from Ziziphus Mill. genus (Rhamnaceae).

  • Advisor : MARIO GERALDO DE CARVALHO
  • COMMITTEE MEMBERS :
  • ALESSANDRA LEDA VALVERDE
  • DOUGLAS SIQUEIRA DE ALMEIDA CHAVES
  • GILDA GUIMARÃES LEITÃO
  • JORGE MAURICIO DAVID
  • LUCIANO RAMOS SUZART
  • MARIO GERALDO DE CARVALHO
  • Data: Oct 19, 2018


  • Show Abstract
  • dos Santos, Carlos Henrique Corrêa. Secondary metabolites and evaluation of biological activities of Siolmatra brasiliensis (Cogn.) Baill. (Cucurbitaceae) and species from Ziziphus Mill. genus (Rhamnaceae). 2018. 200p. Thesis (Ph.D. in Chemistry). Instituto de Química, Universidade Federal Rural do Rio de Janeiro, Seropédica, RJ. 2018.

    The chromatographic procedures with the crude hydroethanolic stem extract of Siolmatra brasiliensis allied to the application of physical methods of organic analysis allowed the isolation and structural determination of twenty compounds, five of them are being described for the first time in the scientific literature. NMR experiments and HR-MS techniques of the natural products and some acetyl derivatives were used. The antinociceptive (in vivo) and anti-glycation (in vitro) activities of the extract and fractions of the species were evaluated. The crude extract showed antinociceptive activity close to the positive control (morphine) at 10 and 30 mg.kg-1 and the ethyl acetate fraction showed antinociceptive effect higher than the control at concentrations of 30 and 100 mg.kg-1. In the evaluation of the anti-glycation activity the crude extract showed similar activity to the control (aminoguanidine) at 0.5 mg.mL-1 and the fraction in chloroform obtained results higher than the control at 0.5 and 0.25 mg.mL-1.

    Four species of Ziziphus were included in this study to evaluation of biological activities, Z. joazeiro and Z. glaziovii presented promising results of bacterial growth inhibition of Aliivibrio fischeri and Bacillus subtilis and all extracts showed significant cytotoxic activities against PC- 3 and HT-29 cell lines. The chromatographic procedures with the chloroform fraction of the Z. glaziovii methanol stem extract, allied to physical experiments of organic analysis allowed identification of seventeen compounds, seven of which are being described for the first time in scientific literature. The compounds were evaluated for antibacterial activity, where epigouanic acid and alphitolic acid showed good results against B. subtilis (IC50 of 20 and 12 μM, respectively). The compounds presented up to the concentration of 10 µM none or weak cytotoxic effects. UHPLC-MS-MS analysis of the alkaloidal fraction of the stem extract of Z. joazeiro allowed the identification of eight type-Ib cyclopeptide alkaloids, the structures were suggested by proposal of mass fragmentation.

5
  • CAROLINA PASSOS DA CUNHA
  • Phytochemical study of Myrcia multiflora (Lam.) DC. E Psychotria
    leiocarpa Cham. & Schlitdl.

  • Advisor : RAIMUNDO BRAZ FILHO
  • COMMITTEE MEMBERS :
  • LUCIANO RAMOS SUZART
  • MARCIA CRISTINA CAMPOS DE OLIVEIRA
  • HUMBERTO RIBEIRO BIZZO
  • MANUELA CRISTINA PESSANHA DE ARAÚJO SANTIAGO
  • RONOEL LUIZ DE OLIVEIRA GODOY
  • Data: Dec 17, 2018


  • Show Abstract
  • Brazil has the greatest bíodíversity in the world, but it needs to value and promote knowledge
    of local biodiversity. The species M. multiflora (lam) DC., popularly known as "pedra-ume-caá"
    (purple fruit), is a native species that belongs to the Myrtaceae family and occurs in Brazil from
    the north to Rio Grande do Sul. The species Psychotria leiocarpa Chamo & Schltdl., popularly
    known as "cafeeiro do mato" (blue fruit), is a native species that belongs to the Rubiaceae family
    and occurs from Paraíba to Rio Grande do Sul. The characteristic coloration of the fruits (purple
    and blue, respectively) of both species draws attention to its potential for use as a natural
    colorant. The seasonality in which fruiting occurs has generated difficulty in the phytochemical
    characterization of fruits of plant species. In this context, the two species remain without
    investígation of the special (secondary) metabolites produced in the fruits. Thus, the aim of this
    work was to characterize the fruits of M. multiflora and P. leiocarpa. The quantification of
    anthocyanins, carotenoids and phenolic acids present in the fruits of M. multiflora was
    performed by HPlC-DAD and the antioxidant capacity was evaluated by free radical capture
    methods (DPPH and ABTS). The f1avonols present in fruits of this species were isolated by
    accelerated liquid chromatography in reversed-phase column. The methanolic extract of P.
    leiocarpa fruits was subjected to partítion in chloroform: water, the aqueous fraction was
    subjected to HPLC separation on a reverse phase analytical column coupled to the channel
    selector valve and the chloroform fraction was subjected to classic chromatography on a normal
    phase column. The isolated substances of both species had their structures determined through
    the interpretation ofthe spectral data furnished by UV, 1D and 2D NMR and high-resolution MS
    (HRMS) involving comparison with data in the literature. Twenty-one substances were identified
    for the first time in the fruits of M. multiflora, among which carotenoids, flavonoids and phenolic
    acids were characterized. Nineteen of these substances were quantified. The fruits of M.
    multiflora presented the third largest antioxidant capacity when compared to eighteen native
    fruits. Eight substances were isolated from the fruits of P. leiocarpa, characterized by
    anthocyanins, phenolic acid and steroids, which were identified for the first time in fruits of this
    species, three of them characterized as acylated anthocyanins previously unpublished in the
    literature. Since the eight substances were identified for the first time in the fruits of this species
    and three of these substances are new acylated anthocyanins. The acylated anthocyanins were
    identified in P. suterella and P. nuda by comparing the retention time and UV-Vis spectrum with
    the extract of P. leiocarpa.

6
  • LUCIANA LUIZ DE AZEVEDO
  • DESIGN, DERIVATIZATION STUDIES AND PHARMACOLOGICAL EVALUATION OF N-METHYL-N-ACYLIDRAZONES PLANNED AS ENZYME PDE4 INHIBITORS

  • Advisor : ARTHUR EUGEN KUMMERLE
  • COMMITTEE MEMBERS :
  • ARTHUR EUGEN KUMMERLE
  • CARLOS MAURICIO RABELLO DE SANT ANNA
  • MARCIO CONTRUCCI SARAIVA DE MATTOS
  • MARCO EDILSON FREIRE DE LIMA
  • MARINA AMARAL ALVES
  • RENATA BARBOSA LACERDA
  • RICARDO OLIMPIO DE MOURA
  • Data: Dec 27, 2018


  • Show Abstract
  • PDEs4 are described in the literature as phosphodiesterase enzymes wich acts in the regulation of cAMP levels and are directly involved in inflammatory processes control in the human body. This characteristic has made this enzyme a very attractive target for development of anti-inflammatory drugs and numerous PDE4 inhibitors have been described, such as N-methyl-N-acylhydrazones (N-methyl-NAHs). Therefore, this work aim at the synthesis, characterization and pharmacological evaluation of novel compounds N-methylNAH derivatives as inhibitors of the PDE4 enzyme, to determine the influence of substituents in different positions for: 1- obtaining hybrid molecules (series A, B and C) for the chronic obstructive pulmonary disease’s treatment (COPD), from the molecular hybridization of salmeterol, a β2 agonist and N-methyl-NAH compounds, described by our group as potent inhibitors of PDE4; and 2- to obtain new N-aryl derivatives (series D) for modulations of physico-chemical properties. All modifications were planned from molecular modeling studies with the N-methyl-NAH prototype. Final molecules of A, B and C series were synthesized in convergent route after obtaining the two main building blocks, salmeterol and N-methyl-NAHs. The synthesis of the N-methyl-NAHs block of A and B series was performed after five steps, presenting yields ranging from 40-99%. For the C series synthesis it was necessary to use an alternative synthetic route, which was performed after four steps and presented yields ranging from 54-99%. The salmeterol block synthesis was performed after three steps in yields ranging from 51-96%. Finally, the reaction for the union of the two building blocks was evaluated testing several reaction conditions. However, there was no success in obtaining the hybrid compounds of A, B and C series. Despite, PDE4 inhibitory activity tests were performed for compounds synthesized in the N-methyl-NAHs block, similar in steric to the proposed final derivatives. It was observed an excellent activity for the C-labeled compound, with 97.4% inhibition of the PDE4 at the concentration of 10μM, as predicted by docking experiments, where it behaved like the N-methyl-NAH prototype. However, for the A and B series the observed results of inhibitory activity (0% and 84.3% at 10 μM, respectively) diverged from the theoretical studies, which predicted a correct interaction for the A series, but ain't for B. The D series synthesis was designed in two main steps: the first one was the synthesis of brominated N-methyl-N-acylhydrazonic derivative after four steps, with yields ranged from 70-92%; and the second one was the cross-coupling reaction itself between the halide and different amines. After several tests with BuchwaldHartwig coupling reaction, the methodology using Pd2(dba)3 as source of palladium, XPhos as binder, K3PO4 as base and dioxane as solvent, at 100 ° C for 3 hours proved to be the most
    promising. 14 different
    N-methyl-N-acylhydrazones were synthesized and characterized, in yields ranging from 40-90%. After the D series synthesis, some were selected according to their physico-chemical characteristics for the biological evaluation, and the results were excellent, with PDE4 inhibition varying in the range of 80.3-100.0% at 10μM . Furthermore, the biological activitie of the D series validate the results observed by the docking experiments, which demonstrated that the essential interactions between ligand and the target enzyme are still there. ance profile.

SIGAA | Coordenadoria de Tecnologia da Informação e Comunicação - COTIC/UFRRJ - (21) 2681-4638 | Copyright © 2006-2026 - UFRN - sig-node4.ufrrj.br.producao4i1