Dissertations/Thesis

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2025
Dissertations
1
  • DÁLETE CÁSSIA VIEIRA ALVES
  • Trophic Ecology and Flavivirus Detection in Mosquitoes (Diptera: Culicidae) in Atlantic Forest Remnants of the State
    of Rio de Janeiro
  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • CECÍLIA FERREIRA DE MELLO
  • HELENA KEIMO TOMA
  • ILDEMAR FERREIRA
  • NATALY ARAÚJO SOUZA
  • Data: Feb 3, 2025


  • Show Abstract
  • The study of mosquito feeding patterns is essential for understanding their role as vectors of
    pathogens. Identifying their food sources provides insights into mosquito foraging behaviors
    and directly impacts the epidemiology of mosquito-borne pathogens such as dengue, Zika,
    and chikungunya. Understanding these feeding patterns is particularly relevant in ecosystems
    like the Atlantic Forest, which is rich in biodiversity and complexity. This study was
    conducted in remnants of the Atlantic Forest at the Guapiaçu Ecological Reserve (REGUA)
    and Sítio Recanto Preservar, both located in the state of Rio de Janeiro, Brazil. The objective
    was to identify the food sources of mosquitoes and detect the circulation of Flavivirus in these
    areas, contributing to a better understanding of ecological and epidemiological dynamics.
    Molecular techniques, such as Sanger-based DNA sequencing of cytochrome b (Cytb), allow
    for precise identification of food sources, which is fundamental for designing control and
    monitoring strategies for mosquito populations. The detection of Flavivirus circulation
    transmitted by culicids was performed through the amplification of specific fragments of the
    viral genome. The genetic material was obtained by extracting viral RNA, followed by the
    detection of Flavivirus using reverse transcription polymerase chain reaction (RT-PCR). A
    total of 2,077 mosquitoes were captured, of which only 145 females (6.98%) were engorged.
    Of these, only 55 samples (37.93%) had their DNA successfully amplified. The results
    revealed a clear tendency for the captured mosquito species to feed predominantly on humans.
    This finding underscores the importance of understanding the interactions between
    mosquitoes and their food sources and raises concerns about the associated risks of pathogen
    transmission to public health. Another significant result was the identification of the Tembusu
    virus, a Flavivirus typically found only in Southeast Asia, raising questions about its
    introduction to Brazil. Our study highlights the importance of investigating mosquito feeding
    preferences, contributing to a deeper understanding of their ecology and epidemiology, and
    emphasizes the need for implementing monitoring strategies for arboviruses to anticipate
    potential outbreaks. Additionally, we stress the necessity of continuously improving
    techniques to identify food sources to better understand the interactions between mosquitoes
    and their environment. This information is crucial for developing effective policies and
    strategies to control vector-borne pathogens.

2
  • NATHÁLIA MENEZES DE ALMEIDA
  • MOSQUITO FAUNA (DIPTERA: CULICIDAE) IN PHYTOTELM ENVIRONMENTS OF THE GUAPIAÇU ECOLOGICAL RESERVE, 
    MACACU WATERFALLS, RIO DE JANEIRO, BRAZIL
  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • ARLINDO SERPA FILHO
  • PAULINO SIQUEIRA RIBEIRO
  • CECÍLIA FERREIRA DE MELLO
  • ILDEMAR FERREIRA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • Data: Mar 14, 2025


  • Show Abstract
  • Phytotelmata are plant structures that collect and retain water, serving as natural larval habitats. Certain species of culicids utilize these water-holding structures for larval development, playing a crucial role in water retention and nutrient cycling, which benefits resident fauna in tropical forests, such as the Atlantic Forest. This study aimed to characterize the taxonomic composition, diversity, species richness, and abundance of mosquitoes within three types of phytotelmata in an Atlantic Forest remnant. Monthly monitoring of mosquito populations was conducted over one year, from March 2023 to February 2024, considering abiotic factors such as temperature, pH, and rainfall, which can influence mosquito larval growth and abundance. Sampling occurred
    in randomly selected phytotelm habitats along trails within the study area. A total of 2,672 culicid specimens were collected, representing 11 genera and 29 species. The most abundant species were Wyeomyia artrostigma, Culex pleuristriatus and Onirion personatum (Lutz, 1904). Bamboo internodes yielded the highest abundance of
    specimens (67.4%), followed by bromeliads (30.7%) and buttress roots (1.9%). This distribution pattern may be due to the varying suitability of different phytotelmata as larval habitats, with bamboo internodes providing more favorable environmental conditions for larval survival. Among types of phytotelmata, bamboo internodes had the highest species richness (22 species) and the largest total number of specimens, highlighting this habitat's importance for the development of many mosquito species. In contrast, buttress roots, despite having fewer specimens, showed the greatest diversity and evenness, indicating a balanced species distribution within this habitat. Kruskal-Wallis analysis revealed significant differences in species abundance among the types of phytotelmata evaluated, suggesting that mosquito population composition and abundance are habitat-dependent. These results support the idea that different phytotelmata offer distinct ecological conditions, influencing the occurrence and development of culicid populations. Notable among the species collected were Aedes albopictus and Haemagogus leucocelaenus known vectors of human pathogens. This study provides valuable insights into the mosquito fauna associated with phytotelmata in an Atlantic Forest remnant, contributing to our understanding of the diversity and ecological dynamics of these environments. Our findings also have public health implications, demonstrating the presence of vector species in a natural habitat, which could inform future research and disease control strategies.

3
  • EVALDO ALVES JOAQUIM JUNIOR
  • Diversity and distribution of semiaquatic bugs (Hemiptera: Heteroptera: Gerromorpha) in the Paranapiacaba Mountain Range Mosaic

  • Advisor : LEANDRO LOURENCO DUMAS
  • COMMITTEE MEMBERS :
  • LEANDRO LOURENCO DUMAS
  • FABIANO STEFANELLO
  • JULIANNA FREIRES BARBOSA
  • Data: Mar 27, 2025


  • Show Abstract
  • Semiaquatic bugs (Hemiptera: Heteroptera: Gerromorpha), despite having a relatively rich
    dataset for southeastern Brazil, still lack comprehensive information in several localities,
    including areas of the Atlantic Forest. The present study aims to survey and catalog the
    Gerromorpha diversity of the Paranapiacaba Mosaic, a region located in southwestern state of
    São Paulo, through the development of a species list based on specimens collected at the site
    and identified. Chapter I presents an inventory of the Gerromorpha fauna of the
    Paranapiacaba Mosaic, where 3.339 specimens were collected during four sampling
    campaigns, distributed among 35 species, 15 genera, and four families. Of these, six species
    were recorded for the first time from the state of São Paulo: Microvelia braziliensis
    McKinstry, 1937, Mi. minima Drake, 1952, Mi. quieta Drake & Carvalho, 1954, and
    Tachygerris adamsoni (Drake, 1952) (Gerridae); Lipogomphus lacuniferus Berg, 1879
    (Hebridae); and Stridulivelia (Stridulivelia) astralis (Drake & Harris, 1938) (Veliidae).
    Chapter II describes a new species of Paravelia Breddin, 1898 (Veliidae), including both
    macropterous males and females, as well as a new record of P. luederwaldti Rodrigues &
    Moreira, 2016, which was previously known only from the type material collected in the
    1910s. Furthermore, an identification key to the species of this genus recorded from Brazil is
    provided.

Thesis
1
  • THAIS MATTOS ESTRUC
  • Morphological Characterization of the Penis of Three Species of Leontopithecus Lesson, 1840 (Primates: Callitrichidae)

  • Advisor : MARCELO ABIDU FIGUEIREDO
  • COMMITTEE MEMBERS :
  • MARCELO ABIDU FIGUEIREDO
  • LUCIANO DA SILVA ALONSO
  • CARLOS AUGUSTO DOS SANTOS SOUSA
  • ALCIDES PISSINATTI
  • MAURICIO ALVES CHAGAS
  • PAULO DE SOUZA JUNIOR
  • YURI KARACCAS DE CARVALHO
  • Data: Apr 11, 2025


  • Show Abstract
  • The genus Leontopithecus includes primates endemic to the Atlantic Forest, with four described species, all threatened by habitat fragmentation and diseases such as yellow fever. This study aimed to characterize and quantify, both macroscopically and using histochemical, immunohistochemical, scanning electron microscopy (SEM), and stereological techniques, the penile elements of the species L. rosalia, L. chrysomelas, and L. chrysopygus, establishing morphometric parameters and inter- and intraspecific variations. Thirty penises
    collected from formalin-fixed cadavers from the Centro de Primatologia do Rio de Janeiro (CPRJ) were analyzed. Macroscopic analyses were performed at the Laboratório de Ensino e Pesquisa em Morfologia de Animais Domésticos e Selvagens at the Universidade Federal Rural do Rio de Janeiro (UFRRJ); histological analyses were performed at the Laboratório de Histologia Integrativa at the Universidade Federal do Rio de Janeiro (UFRJ); scanning electron microscopy (SEM) was conducted at the Centro Nacional de Biologia Estrutural e Bioimagem (CENABIO-UFRJ); and stereological analyses were carried out at the Laboratório de Biomorfologia Celular e Extracelular at the Universidade Federal Fluminense (UFF). Macroscopic analysis revealed that the penis of the three species had three parts: root, body, and glans. The average penis length was 3.27 ± 0.43 cm in L. rosalia, 3.37 ± 0.50 cm in L. chrysomelas, and 3.12 ± 0.53 cm in L. chrysopygus. No significant differences in length were found between the species. The root of the penis showed variations in length and diameter among the species: L. rosalia had a length of 0.78 ± 0.17 cm and diameter of 0.64 ± 0.29 cm; L. chrysomelas had 0.90 ± 0.16 cm in length and 0.63 ± 0.24 cm in diameter; and L. chrysopygus had 0.72 ± 0.18 cm in length and 0.45 ± 0.10 cm in diameter. In the root of the penis, the cavernous bodies were dorsal, with collagen fibers arranged irregularly and surrounded by a tunica albuginea that formed a median septum. In L. rosalia and L. chrysomelas, smooth muscle fibers were present. The body of the penis also showed variations in length and diameter: L. rosalia had 2.44 ± 0.41 cm in length and 0.24 ± 0.06 cm in diameter; L. chrysomelas had 2.20 ± 0.42 cm in
    length and 0.33 ± 0.10 cm in diameter; and L. chrysopygus had 2.01 ± 0.41 cm in length and 0.30 ± 0.05 cm in diameter. The glans was covered by keratinized stratified squamous epithelium with spicules, with dermal papillae observed in L. chrysomelas. Distinct forms and sizes were observed in the glans between species. In L. rosalia, the length was 0.23 ± 0.02 cm and the diameter was 0.23 ± 0.03 cm; in L. chrysomelas, it was 0.27 ± 0.05 cm in length and 0.31 ± 0.06 cm in diameter; and in L. chrysopygus, it was 0.27 ± 0.04 cm in length and 0.28 ± 0.04 cm in diameter. The glans had a triangular shape in L. rosalia and L. chrysopygus, and a mushroom cap shape in L. chrysomelas. The penile bone was located in the dorsal region of the glans in L. rosalia and L. chrysopygus, while in L. chrysomelas, it was located in the cavernous body to the right of the median septum. SEM analysis revealed differences in the spicules of the glans, which were conical and directed toward the proximal region. The spicules in L. rosalia were short and horizontal, while in L. chrysomelas, they were arranged in a crescent shape. This study investigated the morphology and structure of the penis in three Leontopithecus species, revealing anatomical, histological, and morphometric differences among them, such as variations in length, diameter of the glans, and morphology of the penile bone. The analyses showed that the species exhibited distinct characteristics, such as a smaller urethral and cavernous body area in L. rosalia and a larger penile body diameter in L. chrysomelas. The results provide new insights into the evolution of penile morphology in primates and pave the way for future investigations on sexual selection, reproductive strategies, and sperm competition. 

2
  • CLAUDIO NONA MORADO
  • Local ecological knowledge of artisanal fishers from the coast of Rio de Janeiro State on anthropogenic influences on the ichthyofauna and the bioecology of two main target species

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • RAFAEL DE ALMEIDA TUBINO
  • MARCIO DE ALBUQUERQUE VIANNA
  • ELLEN MARTINS CAMARA
  • MAURÍCIO DÜPPRÉ DE ABREU
  • José da Silva Mourão
  • CATIA ANTONIA DA SILVA
  • Data: Nov 7, 2025


  • Show Abstract
  • Local Ecological Knowledge (LEK) of small-scale fishers is essential for understanding changes in coastal environments, contributing to biodiversity conservation, sustainable fisheries management, and the mitigation of socio-environmental problems. This study used LEK to assess temporal changes in fish abundance, identify anthropogenic pressures, analyze shifts in trophic structure (“fishing down marine food web”), and deepen the bioecological understanding of Mugil liza and Micropogonias furnieri in Sepetiba, Ilha Grande, and Guanabara bays (Rio de Janeiro, Brazil). Semi-structured interviews were conducted with 267 fishers from 59 communities using the “snowball” technique. The analyses combined quantitative approaches (univariate statistical techniques) and qualitative approaches (IRAMUTEQ – R Interface for Multidimensional Analysis of Texts and Questionnaires). LEK revealed marked declines in the abundance of ecologically and commercially important species such as Scomberomorus brasiliensis, Scomberomorus cavala, Pomatomus saltatrix, Sardinella brasiliensis, and Epinephelus itajara, as well as reductions in the size of M. furnieri and M. liza, indicating overfishing. The mean trophic level of landed species decreased over the decades, corroborating the “fishing down marine food web” hypothesis. The main anthropogenic drivers cited were industrial pollution, large-scale trawling and purse seine fisheries, and lack of enforcement, with Guanabara Bay showing the most severe impacts due to industrial projects and environmental accidents. LEK also provided novel insights into the biology and ecology of M. furnieri and M. liza, including patterns of reproduction, migration, parasitism, and evidence of resident populations in the Sepetiba Bay. These findings highlight the value of LEK in complementing scientific knowledge, reinforcing the need to integrate small-scale fishers into coastal management, and recommending greater dialogue and collaboration between local communities and environmental authorities.

3
  • JOSÉ HENRIQUE FORTE STORNIOLI
  • Evolution of satellite DNA in the Acipenseriformes Order (Vertebrata: Actinopterygii): A genomic Approach

  • Advisor : RICARDO UTSUNOMIA
  • COMMITTEE MEMBERS :
  • CAIO AUGUSTO GOMES GOES
  • DENISE MONNERAT NOGUEIRA
  • FRANCISCO DE MENEZES CAVALCANTE SASSI
  • MARCELO DE BELLO CIOFFI
  • RICARDO UTSUNOMIA
  • SERGIO PEREIRA
  • VITO ANTONIO MASTROCHIRICO FILHO
  • Data: Dec 16, 2025


  • Show Abstract
  • With the popularization of next-generation sequencing, it has become possible to study elements that were previously inaccessible for large-scale analysis, such as satellite DNAs. This has led to significant advancements in methods for studying these elements and better understanding their potential functionality and evolutionary dynamics. Therefore, aiming to describe the evolutionary processes of these sequences within the base of Actinopterygii, five catalogs of satellite DNAs were described in the order Acipenseriformes, with 224 new satellite DNAs distributed across five species, including 106 satellite DNAs shared among the species, most of which were in the genus Acipenser, supporting the prediction of the Library Hypothesis. Additionally, 12 highly conserved satellite DNAs (>95% similarity) were characterized, with five of these elements absent in the outgroup, indicating that part of this catalog of highly conserved elements deviates from the concept of concerted evolution, having originated prior to the diversification of this group 160 million years ago, with conservation at the order level, while other elements originated de novo within the order Acipenseriformes. Finally, the HindIII satDNA, already isolated in the genus Acipenser, was isolated in this study, while other satDNAs were found in potential regions of lncRNA or mRNA in unanchored scaffolds of Acipenser ruthenus.

2024
Dissertations
1
  • ARTHUR BESSI MACHADO
  • Integrative taxonomy and histological aspects of four species of the superfamily Hemiuroidea Looss, 1899 (Platyhelminthes: Digenea: Hemiurata) parasites of Chaetodipterus faber (Broussonet, 1782) (Acanthuriformes: Ephippidae) from the coast of the state of Rio de Janeiro, Brazil

  • Advisor : JOSE LUIS FERNANDO LUQUE ALEJOS
  • COMMITTEE MEMBERS :
  • CAMILA SANTOS PANTOJA DE OLIVEIRA
  • FABIANO PASCHOAL DE OLIVEIRA
  • JOSE LUIS FERNANDO LUQUE ALEJOS
  • RAQUEL DE OLIVEIRA SIMOES
  • Data: Feb 21, 2024


  • Show Abstract
  • Superfamily Hemiuroidea Looss, 1899 is composed of parasitic species mainly of marine
    teleosts. Chaetodipterus faber (Broussonet, 1782), popularly known as Atlantic spadefish, is a
    marine teleost, being the only representative of the Ephippidae family in the Western Atlantic.
    Integrative taxonomy is characterized by the use of different methodological approaches in the
    study of species. The objective of the present work is to characterize, through optical and
    scanning electron microscopy, histological and molecular analyses, four hemiuroids collected
    from C. faberfrom the coast of the state of Rio de Janeiro: Aponurus laguncula, Lecithocladium
    excisum, L. chaetodipteri and Prosogonotrema bilabiatum. Furthermore, a new host for L.
    excisum is recorded. The specimens were stained with hydrochloric carmine and hematoxylin
    and eosin and Gomori trichrome for, respectively, optical microscopy and histological analysis.
    In molecular analysis, the extracted DNA was amplified using the 28S partial primer.
    Phylogenetic analyses were performed using maximum likelihood and Bayesian inference. In
    general, the morphometric and morphological data observed varied according to previous
    descriptions of the species. However, for some characteristics and structures, higher values
    and/or new conformations were observed that had not been previously reported. Scanning
    electron microscopy and histology analyses corroborated the observations made in optical
    microscopy and also allowed the description and discussion of new characteristics and
    structures. The high node support values observed in the topologies resulting from the
    phylogenetic analysis endorsed the identification of the collected species. In this way, the
    present work contributes to progress in filling the gap regarding the ichthyoparasitological
    diversity of the Brazilian coast, through an integrative perspective of the study of the species.

2
  • MANUELLA PEREIRA CERQUEIRA LEITE
  • Bamboo (Poales, Poaceae): Important maintainer of immature mosquitoes (Diptera: Culicidae) in a biodiversity hotspot in the city of Rio de Janeiro, Brazil

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • CARLOS BRISOLA MARCONDES
  • SHAYENNE OLSSON FREITAS SILVA
  • CECÍLIA FERREIRA DE MELLO
  • Data: Feb 22, 2024


  • Show Abstract
  • Although tropical forests are home to most of the global diversity, they suffer from the most significant knowledge gaps concerning their fauna. Despite its high biodiversity, Brazil is facing an alarming destruction of habitats, with species becoming extinct before they can be discovered or described by science. Therefore, there is an urgent need to expand wildlife inventories, including entomofauna surveys. The present study aimed to analyze the bionomic aspects and the influence of abiotic factors on mosquito fauna whose immature phases develop in two bamboo species, Guadua tagoara and Bambusa vulgaris, in Tijuca National Park, Rio de Janeiro, Brazil. Immatures were collected in 10 artificially drilled bamboos, in five stalks internodes per plant, in two sampling points, from March 2022 to March 2023, during 23 collections. Every 15 days, the water from the internodes was removed through siphoning to obtain the immature ones, with concomitant measurement of pH and temperature. A total of 1845 immatures were obtained, 72.14% at sampling point 1 and 27.86% at sampling point 2. Of this, 1162 individuals reached adulthood, belonging to the following species: Culex
    iridescens, Culex neglectus, Haemagogus leucocelaenus, Orthopodomyia albicosta, Sabethes identicus, Sabethes melanonymphe, Sabethes purpureus, Toxorhynchites bambusicola, Toxorhynchites sp., Trichoprosopon compressum, Trichoprosopon pallidiventer, Wyeomyia arthrostigma, Wyeomyia codiocampa, Wyeomyia lutzi, Wyeomyia oblita, Wyeomyia personata, Wyeomyia serrata, and Wyeomyia sp.. It was observed that the greatest abundance of immature mosquitoes occurred in the Guadua tagoara bamboo species, located at sampling point 1. The study revealed that higher dominance rates were observed in bamboos 2 and 10, with dominance of Orthopodomyia albicosta and Culex. neglectus. The greatest richness was observed in bamboos 1 and 5. It was found that Culex neglectus, Sabethes identicus, Wyeomyia oblita and Wyeomyia lutzi frequented all bamboo plants. The biggest peaks in the abundance of immature culicids were found in November 2022 and January 2023.The Tijuca National Park is a tourist spot and receives a large number of visitors. Thus, humans can become an accessible food source for mosquitoes in this area, making the species survey critical since important
    arbovirus vectors have been recorded in Rio de Janeiro.

3
  • JOÃO GABRIEL REBELLO MACHADO DE OLIVEIRA
  • Diversity of Sabellidae Latreille, 1825 (Annelida) on the South Fluminense Coast of Rio de Janeiro

  • Advisor : ANA CLAUDIA DOS SANTOS BRASIL
  • COMMITTEE MEMBERS :
  • ANA CLAUDIA DOS SANTOS BRASIL
  • ORLEMIR CARRERETTE DOS SANTOS
  • CINTHYA SIMONE GOMES SANTOS
  • RICARDO IGNACIO CASTRO ÁLVAREZ
  • Data: Feb 26, 2024


  • Show Abstract
  • The Sabellidae family currently has 40 genera with more than 400 described species, being one of the most diverse groups of sedentary annelids, easily recognized by the presence of a showy radiolar crown in most species. The identification of species in the family focuses on characteristics of the three regions of the body: crown, thorax and abdomen. Until 2012, approximately, 21 genera and 40 species were recorded for the Brazilian coast, but, after constant synonymization, only 11 of the Sabellidae species recorded for Brazil are currently recognized, of which ten were originally described in Brazilian territory. The objective of the present study was to carry out a systematic-morphological survey of the family on the southern coast of Rio de Janeiro to truly understand the diversity and status of each of the species found. Collections were carried out on different substrates, the specimens were anesthetized, fixed with 4% formalin and kept in 70% ethanol. As a result, 16 species belonging to five genera were reported, five being new occurrences for the Brazilian coast. Furthermore, new species of the genera Acromegalomma, Notaulax and Pseudopotamilla added to the family's diversity on the Brazilian coast. However, many taxonomic confusions still need to be evaluated and new morphological characters need to be identified to improve the process of identifying the family's
    genera and species.

4
  • MARIA DÁVILA RODRIGUES MACIEL
  • Spatial and temporal dunamics in reef fish assemblages of Ilha Grande Bay – RJ

  • Advisor : LEONARDO MITRANO NEVES
  • COMMITTEE MEMBERS :
  • LEONARDO MITRANO NEVES
  • RAFAEL DE ALMEIDA TUBINO
  • LUIS FELIPE SKINNER
  • Data: Apr 19, 2024


  • Show Abstract
  • Reef environments are threatened by multiple disturbances, which operate at different spatial and
    temporal scales that promote changes in the diversity, structure and functioning of ecosystems.
    Understanding how reef fish assemblages respond to environmental and anthropogenic influences
    in space and in the long term is essential to implement management strategies and reduce the
    effects of biodiversity loss on reef environments. The present study aimed to investigate, through a
    distance gradient from the coast, what changes occurred in reef fish assemblages after 10 years of
    expansion of ESEC-Tamoios protection efforts. Underwater visual censuses were carried out on
    rocky shores of Ilha Grande Bay, south of the state of Rio de Janeiro, on islands located across a
    distance gradient from the coast in four periods, with the closest and intermediate locations being
    the coast (area protected by ESEC) sampled in the periods of 2010 and 2019 and locations further
    away from the coast (unprotected area) in the periods of 2010/2011 and 2015. An index (Human
    Impact Index) was developed to quantify the level of human impact at the sampled sites within the
    protected area. Fish assemblage parameters known to respond to long-term human impacts such as
    habitat exploitation and destruction (fish assemblage structure, richness, abundance, and diversity
    of trophic groups) were recorded, seeking to understand the protective effects of ESEC Tamoios
    for the conservation of reef fish species. Multivariate Permutational Analysis of Variance
    (PERMANOVA) and Principal Coordinate Analysis (PCO) were used to test and explore spatial
    variation in fish assemblage parameters between reefs (near, intermediate, and far from shore) and
    between periods (2010 vs. 2019 and 2011/ 2012 vs. 2015). The structure of the fish assemblage did
    not vary between the periods at the closest and farthest sites from the coast to the coast, while
    significant changes were recorded for the intermediate sites to the coast of restricted access
    (PERMANOVA; P < 0.01). The results showed a marked temporal change in the composition of
    the reef fish assemblage between the period of 2010 compared to the period of 2019, mainly in
    intermediate locations on the coast (Ilha de Búzios). Species targeted by recreational and
    underwater fishing were the most affected, especially Epinephelus marginatus (true grouper),
    Mycteroperca acutirostris (Badejo-mira) and Sparisoma frondosum (Parrot fish), which were not
    recorded in 2019. The trophic groups also differed between the periods, with greater emphasis on
    carnivores, scraping herbivores and predators of motile invertebrates. The IIH value was higher in
    locations close to the coast (Ilha do Sandri and Ilha da Samambaia), but also showed a high value
    for intermediate locations (Ilha dos Búzios). The reef fish assemblage changed from a more diverse
    structure, with a greater number of species and abundance of key and important groups for
    fisheries, to a less diverse community, dominated mainly by predators of roaming invertebrates.
    The decrease in the abundance of large predators and scraping herbivores species targeted by
    fisheries indicates that efforts to inspect the marine protected areas of the BIG must be expanded,
    in addition to applying more effective management measures.

5
  • LUCIENE MARQUI CORRÊA
  • Site fidelity, behavior, group size and population composition of Guiana dolphin, Sotalia guianensis (Cetacea:Delphinidae) in Sepetiba Bay - RJ, what has changed in a decade?

  • Advisor : RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • COMMITTEE MEMBERS :
  • RAFAEL DE ALMEIDA TUBINO
  • GABRIEL MELO ALVES DOS SANTOS
  • RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • Data: Apr 24, 2024


  • Show Abstract
  • The considerable increase in anthropogenic activities in Sepetiba Bay has been promoting
    the exposure of numerous long-term threats to the guiana dolphin population, leading to
    significant ecological changes, categorizing it as a future concern in the conservation of
    the resident population. The present study aimed to investigate possible behavioral
    changes, including fidelity and the structure of groups of guiana dolphin in Sepetiba Bay
    – RJ in the last decade. Data were collected in two different sampling periods in Sepetiba
    Bay-RJ: 1. Past, including the periods (2006-2007), and 2. Present, including the periods
    (2017-2019). The photo-identification technique was used in the study to analyze the
    pattern of fidelity of individuals between periods, also observing the number of groups of
    guiana dolphins in each behavioral state, investigating possible seasonal variations.
    Furthermore, the composition of the group and the correlation between immature
    individuals and adults were evaluated, considering the presence/absence of puppies. The
    Mann-Whitney U and Chi-square tests were applied to assess whether the size and
    behavior of the groups differed between periods. To investigate seasonal variations in
    group size between Past and Present, the Kruskal-Wallis non-parametric test was
    performed during all seasons. The results showed that in relation to fidelity, only 2.02%
    of individuals from the past period were recaptured in the present period, indicating that
    these individuals had been using the region for more than a decade. Additionally, a 71.3%
    reduction in average group sizes was observed, varying between seasons, and an almost
    80% reduction in the number of feeding groups. Then, a greater number of puppies were
    recorded per group observed in the past period, with a frequency four times higher
    compared to the present period. Therefore, the discrepancy in relation to group size, as
    well as fidelity and the decline in the number of offspring per group, may be a reflection
    of both the reduced population size due to the morbillivirus and the highly degraded
    nature of the habitat, considering the period spent with lower human activity compared
    to the present period.

6
  • LARISSA DOS SANTOS SILVA AMARAL
  • Long-term changes in fish assemblages of sandy beaches of Ilha Grande Bay – RJ

  • Advisor : LEONARDO MITRANO NEVES
  • COMMITTEE MEMBERS :
  • LEONARDO MITRANO NEVES
  • RAFAEL DE ALMEIDA TUBINO
  • MARCUS RODRIGUES DA COSTA
  • Data: Apr 25, 2024


  • Show Abstract
  • Sandy beaches are dynamic ecosystems that shelter diverse marine biota with significant
    ecological and economic importance. Despite their widespread distribution, there are
    knowledge gaps regarding the characterization of biota and environmental influences for this
    type of ecosystem. The aim of the present study was to investigate temporal changes in the
    structure of juvenile fish assemblages on sandy beaches in the Ilha Grande Bay. Sampling was
    conducted between the periods of 2002/2003 and 2017/2018, from January to December, in 6
    sandy beaches defined based on geomorphological characteristics, continental drainage
    influence, and human occupation. Fish were collected using a "picaré" net, measuring 12m in
    length x 2.5m in height, with a mesh size of 7.5 mm at the center. Three perpendicular beach
    seine hauls were conducted manually on 6 BIG beaches, corresponding to an approximate
    area of 240m² per haul, during daylight hours. A total of 27,142 individuals weighing
    26,072.70 grams were collected, representing 24 families, 25 genera, and 80 species. Families
    with the highest representation included Sciaenidae (10 species), Carangidae (8), Haemulidae
    (5), followed by Engraulidae, Gobiidae (4), and Ariidae (4). The most abundant species/taxa
    were Atherinella brasiliensis, Anchoa spp, Trachinotus carolinus, and Menticirrhus spp.
    Atherinella brasiliensis (65.35%) and Eucinostomus argenteus (9.39%) were the most
    captured species, representing half of the captures for the families Gerreidae and Carangidae,
    respectively. The second period recorded a higher number of representative families
    compared to the first period 2002/2003, such as Engraulidae (66.71%), Atherinopsidae
    (22.59%), Carangidae, and Gerreidae (>3.29%). Samples from the 2002/2003 period
    associated with predictors of higher transparency and rocky outcrop mosaics corresponded to
    7.9% of variation explanation for the species Trachinotus falcatus, Lutjanus synagris, and
    Strongylura timucu, while the period from 2017/2019 was more associated with anthropized
    areas and beaches influenced by the contribution of small to large rivers, environmental
    conditions that favored a higher incidence of Albula vulpes, Anchoa januaria, Anchoa spp,
    Eugerres brasilianus, Genidens genidens, Genidens barbus, and Cathorops spixii. The size
    structure of species differed between periods, with smaller individuals (TL < 5 mm) abundant
    in the period from 2017/2019, whereas in 2002/2003, there was a greater dominance of
    species with TL >9cm, indicating a higher incorporation of juveniles into the sandy beach
    community when temporal patterns are observed over the 15 years. Additionally, a
    homogenization of fish assemblages with the dominance of Anchoa spp. species is noted. The
    results highlight the importance of conservation and integrated management of coastal
    ecosystems, considering the complex interactions between local environmental factors and
    biological communities.

7
  • ALAN SILVA ALVES BASTOS
  • Environmental influences on the structure of fish assemblage on sandy beaches of Ilha Grande Bay – RJ

  • Advisor : LEONARDO MITRANO NEVES
  • COMMITTEE MEMBERS :
  • LEONARDO MITRANO NEVES
  • SADY JUNIOR MARTINS COSTA DE MENEZES
  • ANDRÉ LUIZ MACHADO PESSANHA
  • Data: Apr 26, 2024


  • Show Abstract
  • Coastal ecosystems are threatened by multiple disturbances, demanding an expansion in the
    knowledge of natural and anthropogenic factors that influence the composition and structure
    of fish assemblages. The objective of this study was to investigate the variation in the fish
    assemblage of sandy beaches in the Ilha Grande Bay (BIG) in relation to surrounding habitats,
    physicochemical variables of water, and physical structure of environments. Bimonthly
    samplings over two years (2017-2019) were conducted in three regions of BIG, namely the
    Ribeira Bay (BR), Central Bay (BC), and Paraty Bay (BP), using beach seine nets. The
    percentage of habitat mosaic coverage (HMC) (mangrove, anthropized area, urban area, rocky
    outcrop, sandy ridge, vegetation, pasture, and sandbanks) was recorded within a radius of 2.2
    km from each sampled beach. BR was the region with the highest coverage of urban area
    (35.12%), followed by BP (8.9%) and BC (0.13%). Among the three regions, BR presented
    beaches with shallower depths, higher water temperatures and transparency, as well as
    concentrated mangrove areas on some beaches. BC recorded higher coverage of rocky
    outcrop and sandy ridge, beaches with greater depths and water transparency. BP was
    characterized by the presence of estuaries near the beaches, mangroves present in all sampling
    points, higher turbidity rates, chlorophyll, and lower levels of dissolved oxygen. A total of
    60.232 individuals were recorded (30,052 BP, 5,418 BC, and 24,762 BR), belonging to 96
    taxa (77 BP, 55 BC, and 57 BR). Anchoa spp., Atherinella brasiliensis, and Anchoa januaria
    were the most abundant taxa (87.95% of total abundance), especially due to the presence of
    post-larval stages. In addition to these, Cathorops spixii (1.9%), Mugil liza (5.1%), and
    Eucinostomus argenteus (1.5%) were abundant in BP, BC, and BR, respectively. The
    structure of the fish assemblage varied from a more diverse assemblage associated with
    shallower and more turbid beaches in BP, to less diverse assemblages associated with deeper
    beaches in BC and greater transparency and anthropogenic matrix in BR. Variation in the
    abundance of selected families and estuarine use groups were partly associated with the life
    history of species, denoting proximity to estuaries (e.g., Atherinopsidae), mangrove
    formations and turbidity (e.g., Ariidae), and distance to open sea (e.g., Mugilidae). Tolerance
    to more anthropized environments (e.g., Atherinopsidae) or with high HMC (e.g., Carangidae)
    also influenced abundance, while shallower depth was important for several groups (e.g.,
    Carangidae, Engraulidae, Mugilidae, Marine Migrants, Marine Residents). This study reveals
    the importance of including HMC for spatial and temporal understanding of fish assemblages
    on sandy beaches considering increasing anthropization. If proper protection and conservation
    measures for coastal mosaics are not taken, it is expected that the juvenile fish assemblage in
    the BIG will become increasingly homogeneous and characterized by few generalist/tolerant
    species. Investigating the effects of HMC on biota and monitoring its uses is essential for the
    development of more efficient management measures.

8
  • GUILHERME MARTINS VIOLANTE
  • Biodiversity in the city: effects of local characteristics and landscape on ant communities in squares of Rio de Janeiro

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JAYME AUGUSTO PREVEDELLO
  • ANDRÉ TAVARES CORRÊA DIAS
  • HERALDO LUIS DE VASCONCELOS
  • JARBAS MARCAL DE QUEIROZ
  • Data: Jun 5, 2024


  • Show Abstract
  • Urbanization is one of the main threats to biodiversity, causing environmental changes that facilitate the entry of exotic species and the loss of biodiversity and ecosystem services. However, cities can also harbor a great biodiversity, primarily through urban green spaces such as squares. Ants are important organisms, as they play various ecological roles and canalso be used to monitor biodiversity changes caused by human activities. The aim of this study was to assess how the local characteristics of squares (e.g., canopy cover) and the landscape in which the squares are situated (e.g., forest cover) affect: (1) the native ant community, (2) different functional groups of native ants (e.g., fungus cultivators), (3) the exotic ant community, and (4) individual exotic ant species (e.g., Pheidole megacephala). The study was conducted in 30 squares, with 15 collection stations established in each square where sardine baits were placed on the ground and on tree trunks to collect ants. The quantity and configuration of forest cover were calculated for the 30 landscapes in which the squares
    were situated. For each square, the mean canopy cover and tree diameter were obtained, and the density of trash bins was also recorded. Additionally, each square was categorized according to the degree of impervious surface, and air temperature was measured during ant sampling. Eighty-seven species were identified, eight of which were exotic. Squares with a higher occurrence of the exotic ant P. megacephala had lower occurrences of native ants and other exotic species. The occurrence of P. megacephala also negatively affected the richness
    and occurrence of the functional groups of omnivorous litter and scavengers, omnivorous arboreal ants, and soil or litter dominant ants. The higher the degree of impervious surface in squares, the lower the richness of native ants and omnivorous litter and scavengers ants, and the lower the occurrence of P. megacephala. The richness and occurrence of generalist predators were higher in squares with larger tree diameters, and the richness and occurrence of arboreal predators were higher in squares with higher trash bin densities. Square size
    negatively affected the richness and occurrence of all exotic ants. The species composition of ants differed  between squares with higher and lower occurrences of P. megacephala and with different degrees of impervious surface. These results suggest that simple strategies such as increasing canopy cover and soil permeability in urban squares can contribute to the conservation of native ant diversity. They also suggest that for the conservation of native ants in urban squares, it is important to mitigate the negative effects caused by exotic species.

9
  • NILTON HENRIQUE FONSECA DO NASCIMENTO
  • Assessment of the variation in faunistic parameters of mosquitoes (Culicidae: Diptera) across different forest gradients in the Tijuca National Park Area, Rio de Janeiro, Brazil

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • CECÍLIA FERREIRA DE MELLO
  • ILDEMAR FERREIRA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • JULIA DOS SANTOS SILVA
  • SHAYENNE OLSSON FREITAS SILVA
  • Data: Jul 25, 2024


  • Show Abstract
  • The evaluation of mosquito diversity in Atlantic Forest remnants, considered
    biodiversity hotspots, is of fundamental importance for observing patterns of behavior,
    adaptation, environmental monitoring, and public health. These studies provide valuable
    insights into the ecology and biology of these insects, contributing to a better understanding
    of forest ecosystems and the interactions among the species that inhabit them. The present
    study aimed to assess the variation in faunistic parameters of mosquitoes, including
    abundance, richness, diversity, and evenness along an environmental gradient. This gradient
    extends from the edge toward the interior of the fragment. The study tested the hypothesis
    that edge effects influence the distribution of mosquito species in the Tijuca National Park.
    Sampling was carried out from May 2022 to December 2023, occurring monthly over two
    consecutive days within the park area. Three different sampling points within the
    conservation unit were selected: sampling point 1: forest edge; sampling point 2: 35 meters
    from the edge; sampling point 3: 500 meters from the edge, representing different distance
    gradients. Mosquitoes were captured using CDC light traps with CO 2 , Shannon traps, and
    human bait protected attraction; the combination of these traps provided a representative
    sampling of the diversity of adult mosquitoes present in the study area. Active search for
    immatures was performed in natural larval habitats using pipettes and entomological scoops.
    During the sampling period, a total of 1004 specimens were collected, comprising 320
    immatures and 684 adults, representing 27 species. Statistical analyses showed that
    abundance and richness along the established gradient were not uniform among sampling
    points. The Kruskal-Wallis test identified two distinct sampling points: the forest edge (point
    1) and the location 35 meters from the edge (point 2). The sampling point at the forest edge
    exhibited the highest levels of species richness, diversity, and evenness. However, given the
    brief duration of this study, it is crucial to expand the sampling efforts by increasing both the
    number and frequency of traps and collections. Such enhancements are essential to achieve a
    more thorough understanding of the ecological patterns and processes at play.

10
  • MAYARA BAÊTA SOARES
  • Fragmentation and regeneration of the sponge Heteropia glomerosa (Porifera, Calcarea): Inferences on its invasive potential

  • Advisor : ANDRE QUEIROZ DE PADUA
  • COMMITTEE MEMBERS :
  • ANA CLAUDIA DOS SANTOS BRASIL
  • ANDRE QUEIROZ DE PADUA
  • FERNANDA FERNANDES CAVALCANTI
  • VINÍCIUS DA ROCHA MIRANDA
  • Data: Aug 30, 2024


  • Show Abstract
  • Heteropia glomerosa was the most recent species of calcareous sponge to be recognized as exotic in
    Brazil. It was first observed in Ilha Grande Bay, in the coast of Rio de Janeiro State, in 2005, and
    since than, has spread across the Brazilian coast, commonly associated with port areas and artificial
    substrates. Characteristics such as rapid reproduction, tolerance to different temperatures, and varied
    habitats characterize its opportunistic behavior, and contribute to its rapid and widespread distribution.
    Heteropia glomerosa is a multioscular sponge with several tubes connected to a base, achieving
    variable sizes. In general, it has a fragile consistency, being susceptible to accidental fragmentation
    events due to the movement of the structures to which it is attached or occasional contact with other
    objects or organisms. In this study, we investigated the events after tube fragmentation in individuals
    of this species, including the morphological processes of regeneration, reconstitution of polarity, and
    resettlement capacity, in addition to determining whether there is competition for resources between
    regeneration and reproduction. It was observed that H. glomerosa regenerates more quickly regions
    whose absence can compromise the internal flow of water, such as the osculum. The oscular region
    seems to be responsible for determining the polarity of the tubes, since small fragments of this region
    tend to restore the original apical-basal axis of the species, while medium and large fragments present
    varied results. In addition, we observed that isolated fragments are able to resettle when the substrate
    and environmental conditions are favorable and we infer that regeneration does not interfere with the
    reproduction of the species, since fragments in the regeneration process continue to reproduce
    normally, presenting reproductive elements. These results show us that the species Heteropia
    glomerosa not only survives and regenerates quickly, but also continues to contribute to the
    population dynamics even after suffering injuries, being able to colonize new environments through
    fragmentation. Therefore, the combination of these characteristics increases the invasive potential of
    the species. Identifying and understanding the invasive potential of a species allows us to adopt
    protective measures against possible future damage that may be caused to native biodiversity.

11
  • CARLOS NEI ORTÚZAR FERREIRA
  • Taxonomy and Systematics of Tyzzeria Allen, 1936 (Chromista: Apicomplexa): characterization of morphotypes and phylogenetic position of the genus based on molecular evidence

  • Advisor : BRUNO PEREIRA BERTO
  • COMMITTEE MEMBERS :
  • BRUNO PEREIRA BERTO
  • VIVIANE MOREIRA DE LIMA
  • CARLOS WILSON GOMES LOPES
  • SERGIAN VIANNA CARDOZO
  • THIAGO FERNANDES MARTINS
  • Data: Sep 30, 2024


  • Show Abstract
  • Issues related to the taxonomy and systematics of coccidia still have many
    issues to be resolved, both in terms of surveying the biodiversity of these parasites and in
    the phylogenetic organization of their taxa. Tyzzeria Allen, 1936 remains to this day as
    one of the few groups of coccidia without its genetic characterization deposited in
    GenBank. Furthermore, its current classification within the family Eimeriidae Minchin,
    1903 is questionable. In this work, we present four morphotypes of this coccidia
    recovered from fecal samples of domestic and wild birds (Anseriformes: Anatidae) from
    Brazil. Morphotype 1 presented subspherical oocysts measuring 13.5 x 12.0 μm,
    morphometric index of 1.1 μm, double and smooth wall with a thickness of 1.0 μm.
    Morphological morphotype 2 presented ellipsoidal oocysts measuring 13.6 x 10.4 μm,
    morphometric index of 1.3 μm, double, smooth and thin wall with a thickness of 0.8 μm.
    Morphological morphotype 3 presented ellipsoidal oocysts measuring 14.5 x 11.7 μm,
    morphometric index of 1.2 μm, double, thick and slightly rough wall, with a thickness of
    1.1 μm. Morphological morphotype 4 presented ellipsoidal oocysts measuring 14.7 x 11.2
    μm, morphometric index of 1.3 μm, double, thick and very rough wall, with a thickness
    of 1.4 μm. Taking into account the sample number of oocysts analyzed,
    morphological/morphometric parameters, sequencing performed and aspects of parasite
    specificity in the host; only morphotype 1 could be identified, which was consistent with
    Tyzzeria parvula (Kotlán, 1933) Klimeš, 1963. Its oocysts were then isolated and
    sequenced. Here, the first molecular characterization of the genus (from oocysts of this
    species) is provided, and phylogenetic analyses demonstrate that this coccidian genus is
    closely related to Schellackia Reichenow, 1919, and other amphibian eimerids.

12
  • JULIANA DA COSTA SANTOS
  • Diversity and distribution of aquatic bugs (Insecta: Heteroptera: Nepomorpha) from Espírito Santo, southeastern Brazil

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • Alana Patricia Meguy Guterres
  • FABIANO STEFANELLO
  • Data: Sep 30, 2024


  • Show Abstract
  • Nepomorpha (Insecta: Hemiptera: Heteroptera) encompasses the truly aquatic bugs.
    Members of this infraorder display high morphological diversity, with oval and flattened
    or rounded and globular body. Most of them are yellow to black, but some have colorful
    body and specific spot patterns. The Brazilian fauna of aquatic bugs is poorly known in
    most of the territory, with samples and studies concentrated in some states of the
    southeastern and northern regions, while other areas remain underexplored. Such fact is
    especially evident in Espírito Santo, where only 20 species had been recorded until the
    development of this study. The objective of the present study was to know the diversity
    and distribution of Nepomorpha from Espírito Santo, by obtaining specimens, recording
    new occurrences, and elaborating a species list. A total of 1846 specimens belonging to
    37 species and two subspecies have been examined, representing nine families and 19
    genera. In total, 52 species, 21 genera, and nine families occur in Espírito Santo, of which
    22 species, six genera, and three families (Helotrephidae, Micronectidae, and Pleidae)
    are herein recorded for the first time from the state. Among the species present in the
    state, 21 (40.39%) are endemic from Brazil, while 24 (46.15%) also occur in other South
    American countries and Trinidad & Tobago, six (11.54%) are distributed throughout the
    Neotropical region, and only one (1.92%) is widely distributed in the Americas, including
    the United States.

13
  • LARYSSA CORDEIRO DA SILVA FERREIRA
  • Microplastic contamination in demersal and pelagic fish from two differently anthropized bays on the coast of Rio de Janeiro, Brazil

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • JAYME MAGALHAES SANTANGELO
  • RAQUEL DE ALMEIDA FERRANDO NEVES
  • ANDRÉ LUIZ CARVALHO DA SILVA
  • WAGNER FERREIRA MAGALHÃES
  • Data: Nov 29, 2024


  • Show Abstract
  • Microplastics (MPs) have emerged as one of the major global environmental threats due to their omnipresence, bioavailability, persistence, and toxicity. In marine environments, MPs are widely distributed and accessible to various aquatic organisms, including fish. The main objective of this study was to quantify, classify, and identify MPs in different fish tissues, as well as to investigate whether environmental factors, seasonality, and levels of anthropogenic pressure influence contamination. The tested hypothesis was that environments under greater anthropogenic pressure have a higher abundance of MPs in fish, and that pelagic species ingest more MPs than demersal species, considering the buoyancy and distribution of particles. Muscle and digestive tract samples from two pelagic and two demersal species were analyzed, collected in two bays with different anthropogenic influences (Sepetiba and Ilha Grande) during summer and winter. Samples were digested, vacuum-filtered, analyzed under a microscope, and identified using micro-FTIR. Of the analyzed fish, 60% contained MPs. The results indicate a relationship between MP ingestion, fish size, season of the year, and regional urban activities. Fish from the bay with higher human population density showed a greater abundance of MPs in summer, possibly due to increased continental water inflow during this period, one of the major sources of MPs in the ocean. MPs were detected in all analyzed species, even in tissues consumed by humans. Species from more preserved environments also contained MPs in both muscle and digestive tracts, suggesting the presence of these contaminants in previously considered uncontaminated areas. Species' position in the water column did not influence MP concentration differences, indicating a broad distribution of these contaminants both in the water column and near sediment. Preliminary micro-FTIR analysis of particles indicated a higher abundance of cellulose polymer, accounting for 30% of the total analyzed. In conclusion, fish in environments with higher anthropogenic pressure are more susceptible to MP contamination, supporting our hypothesis. However, more detailed studies are essential to investigate MP transfer to tissues and the potential health risks of this contamination for humans.

Thesis
1
  • RENATA MEDEIROS DO NASCIMENTO
  • Comparative morphology of the brachial plexuses of golden lion tamarin (Leontopithecus rosalia, Linnaeus 1766), golden-faced lion tamarin (Leontopithecus chrysomelas, Kuhl 1820) and black lion tamarin (Leontopithecus chrysopygus, Mikan 1823)

  • Advisor : MARCELO ABIDU FIGUEIREDO
  • COMMITTEE MEMBERS :
  • MARCELO ABIDU FIGUEIREDO
  • ALCIDES PISSINATTI
  • CARLOS AUGUSTO DOS SANTOS SOUSA
  • ROGÉRIO MAGNO DO VALE BARROSO
  • YURI KARACCAS DE CARVALHO
  • Data: Feb 28, 2024


  • Show Abstract
  • The morphology of the brachial plexuses is closely related not only to the movement of the thoracic limbs but also to the locomotion of living beings that have them. Its comparative study provides information that allows us to understand how individuals of different species can interact within their group or with the environment in which they live (natural or captive). The objective of this research was to describe and compare the origins and antimeric distributions of brachial plexus nerves in three groups of lion tamarin species of the genus Leontopithecus. Thirty-two male lion tamarin specimens of the genus Leontopithecus (11 L. rosalia, 10 L. chrysomelas and 11 L. chrysopygus) were used, coming from the Non-Human Primate Breeding Service of the Primatology Center with different death histories and transferred to the Teaching and Research Laboratory in Morphology of Domestic and Wild Animals (LEPMADS) of the Department of Animal and Human Anatomy of the Federal Rural University of Rio de Janeiro. Specimens were fixed with perfusion of 10% formaldehyde solution. The information found was represented through absolute frequencies and simple percentages. The ventral rami are composed of three nerve trunks and two fascicles: cranial, middle and caudal trunks; dorsal and ventral fascicles. The right and left brachial plexuses were derived from the ventral spinal branches C5 to T1 with different frequencies in their arrangements in the three groups studied. These arrangements had distinct contributions to the formation of the resulting nerves between species. Among them, those that supply the extrinsic muscles (subclavian, cranial pectoral, caudal pectoral, thoracodorsal, long thoracic and lateral thoracic), the intrinsic muscles (suprascapular, subscapular, axillary, musculocutaneous, median, radial and ulnar) and cutaneous muscles through the nerves medial cutaneous layer of the arm and medial cutaneous layer of the forearm. The data presented in this study allow us to contribute information regarding the evolutionary biology and conservation of primates, which are a group of great importance for the biodiversity of different ecosystems, in addition to being experimental models for public health research.

2
  • CELSO LUIS CRUCES CHANCAHUAÑA
  • Taxonomy and phylogeny of dactylogyrids (Platyhelminthes: Monogenea: Dactylogyridae) parasites of marine
    fish in the northern region of Peru

  • Advisor : JOSE LUIS FERNANDO LUQUE ALEJOS
  • COMMITTEE MEMBERS :
  • JOSE LUIS FERNANDO LUQUE ALEJOS
  • RAQUEL DE OLIVEIRA SIMOES
  • RODNEY KOZLOWISKI DE AZEVEDO
  • SIMONE CHINICZ COHEN
  • LUIZ EDUARDO ROLAND TAVARES
  • FABIANO PASCHOAL DE OLIVEIRA
  • Data: Jul 11, 2024


  • Show Abstract
  • The present work aims to study the taxonomy and phylogeny of dactylogyrid parasites of
    marine fish in the northern region of Peru. Between March 2018 and December 2019,
    three species of bony fish were collected with the help of local fishermen:
    Pronotogrammus multifasciatus Gill (Serranidae), Brotula clarkae Hubbs, 1944
    (Ophidiiformes: Ophidiidae), and Galeichthys peruvianus Lütken, 1874 (Siluriformes:
    Ariidae) to study their parasites. The dactylogyrids found were morphologically analyzed
    using light microscopy and, in some cases, were genetically analyzed. In the first chapter,
    a new genus, Bicentenariella Chero, Cruces, Sáez & Luque, 2022, is proposed, and three
    new species, B. claudiae (type species), B. sinuosa, and B. puertopizarroensis, are
    described from the gills of P. multifasciatus. Additionally, two species previously
    described in the genus Parancylodiscoides Caballero y Caballero & Bravo-Hollis, 1961,
    P. peruensis, and P. signiferi, are transferred to Bicentenariella n. g. as B. peruensis and
    B. signiferi. In the second chapter, a new genus, Brotulella Cruces, Chero & Luque, 2023,
    is proposed based on morphological and molecular data to accommodate two new species
    of dactylogyrids, Br. laurafernandae (type species) and Br. luisahelenae, on the gill
    filaments of B. clarkae. The species of Brotulella are distinguished from all other
    dactylogyrids by the combination of the following characteristics: (1) anchors with a
    stocking-shaped sheath associated with the distal end of superficial and deep roots, (2)
    tandem gonads, (3) a vas deferens looping around the left intestinal caecum, (4) a distally
    twisted male copulatory organ (MCO) with a delicate membranous accessory piece
    articulated to the shaft of the MCO, (5) a U-shaped ovary, (6) an almost sigmoid seminal
    vesicle, and (7) two prostatic reservoirs with thick muscular walls. In the third chapter,
    three new species, two of Neotetraonchus and one of Chauhanellus, are described
    infecting the gills of G. peruvianus. The 28S rDNA gene sequences for these species were
    provided, and their phylogenetic position was investigated. The species described here
    represent the first occurrences of the genera Neotetraonchus and Chauhanellus in Peru.

3
  • RAFAEL JORDÃO PIRES SILVA
  • DIVERSITY AND NICHE MODELING OF TRUE WATER BUGS (HEMIPTERA: HETEROPTERA: NEPOMORPHA) IN THE CAATINGA BIOME

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • LEANDRO LOURENCO DUMAS
  • ERLANE JOSÉ RODRIGUES DA CUNHA
  • CAROLINA BRANCO DALE COUTINHO
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • Data: Aug 7, 2024


  • Show Abstract
  • The Brazilian biodiversity, especially the insects, represents a significant challenge for science, given the gap between the known species and the estimates of species richness. This gap is more pronounced in aquatic insects, which are crucial for understanding anthropogenic impacts, habitat stability, and ensuring the quality of water resources. Among the Brazilian biomes, one of the least known and sampled is the Caatinga. It has a strictly national distribution, present in nine states in the Northeast Region and partially in Minas Gerais. Nevertheless, it is undersampled, possibly due to the perception that this semiarid region would not house great biodiversity, a hypothesis refuted by the high degree of endemism of fish and amphibians in this domain. A more in-depth knowledge of its biodiversity would fill distribution gaps, assisting biogeographical and conservation studies. In the country, there is a significant projection of insect taxa yet to be discovered, with many of them possibly becoming extinct even before being described. The order Hemiptera is among the most diverse in the national territory, with approximately 30 thousand registered species. Faced with the challenges posed by the accelerated extinction in the Anthropocene, new approaches are necessary to establish protected areas for these species. Among them, potential distribution modeling can assist in proposing regions for more effective and comprehensive protected areas, based on species records and environmental variables, a technique aligned with the magnitude of the Brazilian biodiversity. In this work, three new species of the infraorder Nepomorpha (Hemiptera: Heteroptera) were described, belonging to the genera Tenagobia (Micronectidae), Australambrysus (Naucoridae), and Ochterus (Ochteridae). Additionally, unprecedented distribution records for the infraorder were made in the states of Alagoas (28), Bahia (14), Ceará (14), Pernambuco (11), Piauí (7), and Sergipe (23). Furthermore, a key to the species of Notonectidae from northeastern Brazil is presented, and potential distribution models were generated for Belostoma anurum, Be. dallasi, Be. foveolatum, Be. micantulum, Be. plebejum, Buenoa amnigenus, Bu. fuscipennis, Bu. konta, Bu. mutabilis, Bu. platycnemis, Bu. salutis, Bu. tarsalis, Bu. unguis, Centrocorisa kollari, Gelastocoris flavus flavus, Heterocorixa wrighti, Lethocerus annulipes, Limnocoris pusillus, Martarega bentoi, Mar. brasiliensis, Mar. membranacea, Maculambrysus stali, and Notonecta disturbata. Additionally, critical areas for the conservation of these organisms in the Caatinga Biome were identified, based on their conservation importance calculated by the Zonation software and analyses of Kernel Density and relative richness. The mesoregions of Northern Ceará, Metropolitan Region of Fortaleza, Sertão Cearense, and Northeastern Bahia were highlighted as of significant potential richness for the infraorder.

4
  • WAGNER UEHARA
  • Taxonomic and functional patterns of fish assemblages in oceanic and estuarine beaches along the Brazilian coast: a latitudinal, regional, and local approach

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • JAYME MAGALHAES SANTANGELO
  • FRANCISCO GERSON ARAUJO
  • RAFAEL DE ALMEIDA TUBINO
  • HELAINE DA SILVA MENDONÇA
  • HAMILTON HISSA PEREIRA
  • ANA PAULA PENHA GUEDES
  • Data: Aug 28, 2024


  • Show Abstract
  • The analysis of biodiversity patterns at different spatial scales is fundamental to ecology, biogeography, and conservation biology, as underlying processes are scale-dependent. While recent advances have contributed to our understanding of how biodiversity is organized, there is a significant gap in the scientific literature from the Global South regarding macroecological studies that integrate approaches across different spatial scales and simultaneously consider environmental, anthropogenic, and biological factors. The central aim of this thesis is to analyze the composition and processes shaping fish assemblages on sandy beaches (coastal and estuarine) along the Brazilian coast, using primary and secondary data at different spatial scales (local, regional, and latitudinal) and employing diverse approaches (taxonomic, functional, and environmental), thereby providing a comprehensive and detailed perspective to fill this gap. The thesis is organized into three chapters. In Chapter 1 (C1), the processes of fish assemblage formation on estuarine and oceanic beaches are analyzed at latitudinal and regional scales along the Brazilian coast, using taxonomic and functional ß-diversity from the perspective of two ecological hypotheses: Hubbell's Neutral Theory and Hutchinson's Niche Theory. In Chapter 2 (C2), the relationships between fish species occurrence, their functional traits, and environmental variables are analyzed at the same scales and beach types mentioned in C1, using an RLQ approach and Fourth-corner statistics. In Chapter 3 (C3), the effects of environmental and anthropogenic factors on the structuring of fish assemblages are evaluated at the local scale for insular and coastal beaches in Southeastern Brazil, using permutation tests (PERMANOVA) and Generalized Additive Mixed Models (GAMM). Overall, the results reveal that fish assemblage formation is influenced by a complex interaction between ecological, environmental, anthropogenic, neutral, and niche processes, varying according to spatial scale and habitat type. It was demonstrated in C1 that niche processes predominate through selective extinction associated with environmental gradients, while neutral processes are restricted to tropical zones, associated with environmental stability, ecological drift, and species dispersal. In C2, it was found that the associations between species occurrence, functional traits, and environmental variables in both estuarine and oceanic beaches are not random, being stronger in the estuarine beaches. In C3, fish assemblages varied at the local scale (bays, beach type, and seasons), with anthropogenic impact being the most important environmental predictor for the descriptors of fish assemblages, positively related to species abundance and richness. Effective coastal biodiversity management should integrate multiscale actions that address both local habitat conservation and the protection of ecological processes at regional and latitudinal levels. By demonstrating the predominance of niche processes and the influence of anthropogenic impacts, the results provide a critical foundation for the implementation of conservation policies that ensure the sustainability of coastal ecosystems in Brazil.

5
  • SERGIO LISBOA MACHADO
  • Diversity and structure of mosquito communities (Diptera: Culicidae) and detection of circulating arboviruses in 
    remnants of the Atlantic forest, state of Rio de Janeiro, Brazil
  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • ILDEMAR FERREIRA
  • CECÍLIA FERREIRA DE MELLO
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • SHAYENNE OLSSON FREITAS SILVA
  • VALÉRIA CID MAIA
  • NATALY ARAÚJO SOUZA
  • Data: Oct 22, 2024


  • Show Abstract
  • The Atlantic Forest is an exceptionally biodiverse region that stretches across parts of Brazil, Paraguay, and Argentina. Human activities, such as deforestation, coupled with climate change, have the potential to severely harm this environment. These actions lead to habitat destruction and, as a result, cause ecological imbalances. They also disrupt mosquito communities, known as culicids, many of which act as vectors for pathogens responsible for diseases like Yellow Fever, Zika, and Chikungunya. When human activities encroach upon the natural habitats of mosquitoes, conditions become more conducive to their reproduction and survival, as some taxa exhibit adaptability to various environments, occurring in different types of larval habitats, thus increasing the risk of arbovirus transmission. This study, therefore, aimed to analyze the ecological aspects of Culicidae while simultaneously detecting the circulation of arboviruses in various remaining fragments of the Atlantic Forest across the municipalities of Casimiro de Abreu (Fazenda Três Montes), Silva Jardim (Sítio Terra Boa), Nova Iguaçu (Sítio Boa Esperança), and Cachoeiras de Macacu (Reserva Ecológica do Rio Guapiaçu) in
    the state of Rio de Janeiro, and to assess the risk of emergence and transmission of arboviruses. Sampling was conducted monthly over three consecutive days between 2018 and 2023. Adult specimens were captured using CDC and Shannon light traps, as well as the protected human attraction technique (TAHP) using Castro traps. Immature specimens were collected with the aid of entomological shells, ovitraps, and polyethylene pipettes. Larvae and pupae were then pipetted and transferred into 250 ml plastic bags. This combination of traps provided a comprehensive and representative sampling of the diversity of adult mosquitoes present in the study area. Arbovirus detection was carried out through viral RNA extraction. From the start of the study up
    until May 2024, 18,434 insects (1,418 pools) were processed. At Fazenda Três Irmãos, located in Silva Jardim, our observations of ecological indices revealed a significant positive correlation between the species Haemagogus leucocelaenus and Aedes terrens with abiotic variables such as temperature and relative humidity. Haemagogus janthinomys showed a positive and statistically significant correlation with rainfall
    levels. The months of December 2020, November 2021, and January 2022 were identified as periods with the highest occurrence of culicid eggs in this location. Notably, the most abundant species found was Haemagogus leucocelaenus, with the majority of individuals recorded at altitudes of 2m and 6m. We detected the Yellow
    Fever virus in seven pools and the Zika virus in five pools, both in 2019. Haemagogus  janthinomys was found to be of low abundance, possibly due to the species' requirement for multiple immersions for its eggs to reach the embryonic stage. Our findings indicate that abiotic factors such as higher temperature, relative humidity, and precipitation levels contribute to the multiplication of Culicidae and should be considered when developing strategies for the control and prevention of disease spread.

6
  • JHON LENNON GENOVEZ DE OLIVEIRA
  • Diversity and distribution of fungi and coccidian parasites of wild birds from two distinct phytophysiognomies in the State of Rio de Janeiro

  • Advisor : BRUNO PEREIRA BERTO
  • COMMITTEE MEMBERS :
  • BRUNO PEREIRA BERTO
  • ILDEMAR FERREIRA
  • LAURANNE ALVES SALVATO
  • MARIANA DE SOUZA OLIVEIRA
  • SERGIAN VIANNA CARDOZO
  • SERGIO GASPAR DE CAMPOS
  • THIAGO FERNANDES MARTINS
  • Data: Oct 25, 2024


  • Show Abstract
  • O desmatamento na Mata Atlântica do Brasil tem impactado significativamente sua flora, fauna e microbiota. Apesar disso, a diversidade fúngica presente nesses ecossistemas é pouco compreendida. Esta pesquisa investigou a interação entre fungos e aves, considerando que as características morfológicas e fisiológicas específicas das aves podem influenciar sua suscetibilidade à colonização por esses microrganismos. Foram
    coletadas 238 amostras de 119 aves silvestres (119 penas e 119 fezes) no Parque Nacional do Itatiaia e na Ilha da Marambaia, no sudeste do Brasil. Os fungos filamentosos isolados dessas amostras foram identificados com base em características macroscópicas,

    microscópicas e molecular. Entre as amostras oriundas de aves, Aspergillus spp., Mucor spp., Cladosporium spp., Fusarium spp., Penicillium spp. e Syncephalastrum spp. foram os mais abundantemente identificados. Nas amostras de serrapilheira, Aspergillus spp., Fusarium spp. e Penicillium spp. predominaram, evidenciando a presença de espécies de fungos saprófitas nas penas e fezes de aves silvestres, assim como na serrapilheira do ambiente. Além disso, um outro estudo descreve uma nova espécie de Isospora, chamada Isospora pichororei, encontrada em Synallaxis ruficapilla no Parque Nacional de Itatiaia, Brasil. A nova espécie apresenta morfologia distinta de outras espécies do gênero Isospora na família Furnariidae. A identificação molecular foi baseada na amplificação do gene mitocondrial cox1, que mostrou alta similaridade com Isospora oliveirai. Esta é a primeira descrição de Isospora para Synallaxinae e a terceira para Furnariidae.

2023
Dissertations
1
  • MARCELO CORRÊA DOS SANTOS BATISTA
  • Natural History of Cycloramphus lithomimeticus (Anuran: Cycloramphidae) in Parque Estadual do Cunhambebe.

  • Advisor : HELIO RICARDO DA SILVA
  • COMMITTEE MEMBERS :
  • HELIO RICARDO DA SILVA
  • MARCELO SOARES
  • CARLA SANTANA CASSINI
  • VINÍCIUS DA ROCHA MIRANDA
  • Data: Feb 15, 2023


  • Show Abstract
  • The genus Cycloramphus aggregates 30 species and for most of these species we only know the series of animals used in the description and almost nothing of their natural histories. In the few studies on the subject, reproductive behaviors, feeding aspects, intra and interspecific relationships are described. Even with the growing number of herpetologists in Brazil, few studies published in these areas are still produced, although these data are essential for several aspects involving conservation. The study of the natural history of Cycloramphuslithomimeticus made it possible not only to add several aspects of these dimensions and to make some important discoveries about the biology of this species. Visits for observation and data collection were carried out at the type locality of the species, at the itingussu waterfall in the Parque Estadual do Cunhambebe. At each visit, individuals were observed, sometimes recorded, photographed and some collected. Among the findings described in these studies, we emphasize habitat preference for both adults and larvae. The choice of spawning sites, with mosses and constant running water. We also observed predation of tadpoles by crabs and bedbugs, in addition to the presence of potential predators for tadpoles and adults, such as spiders and snakes. We also evaluated the behavior of individuals during the reproductive period and identified territorial disputes by males, in addition to displays indicative of lekking, as already identified for others. Clutches, which contain relatively few eggs, are partially protected by males and contain unfertilized eggs. In addition, the presence of tadpoles in almost all months of the year indicates that reproduction in this species is prolonged, however torrential rains can carry both tadpoles and spawning in some of the reproductive sites.

2
  • GABRIEL LIMP FLORENTINO DA SILVA
  • Following the Path of Wet Rocks: How Does the Order of Rivers in the Basins of Eastern Brazil Relate to the Distribution of Species of Cycloramphus (Anura: Cycloramphidae)?

  • Advisor : HELIO RICARDO DA SILVA
  • COMMITTEE MEMBERS :
  • HELIO RICARDO DA SILVA
  • LEANDRO LOURENCO DUMAS
  • BIANCA DE FREITAS TERRA
  • ILANA FICHBERG
  • Data: Mar 8, 2023


  • Show Abstract
  • The first classifications of rivers by their orders emerged as an attempt to systematically group rivers of similar size, depth and water flow. Among several methodologies developed, the one by Strahler, 1957, stands out, widely used in studies focused on hydrological issues, and also in studies on biodiversity. Through the cartographic representation of the distribution of Cycloramphus species (Anura: Cycloramphidae) for the species that reproduce in streams, this study correlates their occurrence with the ordering of rivers by the Strahler, 1957 system in the states of Rio de Janeiro and São Paulo. Geographically distant and isolated occurrences on islands of populations of the same species are also evaluated. The geographic points were collected through the SpeciesLink platform, in published articles and in specimens deposited at the Laboratory of Natural History, Comparative and Systematic Anatomy of Amphibians at UFRRJ. There are 560 records of twelve species distributed in 87 points. With the representation of rivers, the records show interconnected populations through the drainage network. Insular populations and others that are not connected in the current hydrogeographical pattern are explained through historical environmental alterations, among them and mainly, alteration of the mean sea level. The cartography resulting from this investigation can also serve as a model for predicting the occurrence of this group of cycloramphids in areas not yet sampled, since rivers not yet sampled, in the same hydrographic basin, have great chances of harboring populations of these species. It also discusses problems related to the conservation of environments that are specific to the occurrence of the group, which are wet rocks in rivers with the formation of waterfalls, beginnings of rivers or intermittent rivers, and the riparian vegetation of these environments.

3
  • ANA LUIZA MELLO SOARES PIRES
  • Variation in Guiana Dolphin whistles over 10 years in Ilha Grande Bay

  • Advisor : RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • COMMITTEE MEMBERS :
  • ILDEMAR FERREIRA
  • RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • LILIANE FERREIRA LODI
  • Data: Mar 15, 2023


  • Show Abstract
  • Acoustic repertoires can vary in time scale and may present changes influenced by the creation of new social alliances and/or changes in the acoustic landscape. Thus, the objective of this work was to evaluate the changes in the acoustic parameters of the whistles obtained by the Guiana dolphin in Ilha Grande Bay over 10 years. This study uses as a basis a bank of acoustic recordings in Ilha Grande Bay from the years 2007-2008 and new recordings made in 2017-2018. To understand the temporal variation, the mean frequency, duration of whistles and emission rate in movement and foraging behavior were compared. In this study, it was identified that the emissions of this population show changes over time. These changes include an increase in maximum frequencies, little increase in minimum frequency and emission rate. These changes seem to occur in response to the fluidity of the rate of residence in the area and presence of calves evidencing the ecological importance of the area as a nursery.

4
  • DANIELA CRISTINA SOUZA MONTEIRO
  • Feeding, trophic level, southwestern atlantic, Bluefish, Skipjack tuna, stingrays

  • Advisor : RAFAEL DE ALMEIDA TUBINO
  • COMMITTEE MEMBERS :
  • ACACIO RIBEIRO GOMES TOMAS
  • CASSIANO MONTEIRO-NETO
  • LEONARDO MITRANO NEVES
  • RAFAEL DE ALMEIDA TUBINO
  • Data: May 18, 2023


  • Show Abstract
  • The composition of the stomach contents of 989 individuals of the species Katsuwonus pelamis (93), Pomatomus saltatrix (521), Atlantoraja cyclophora (129) and Rioraja agassizii (246) captured off the coast of Rio de Janeiro was analyzed. Of the pelagic species, Katsuwonus pelamis, showed to have a specialist feeding strategy, consuming predominantly sardines (Sardinella brasiliensis), while Pomatomus saltatrix has its diet composed mainly of eagle owls (Dactylopterus volitans) and a specialist-opportunistic strategy. Among the demersal stingray species, Atlantoraja cyclophora and Rioraja agassizii, similar feeding strategies were observed, with preference for the consumption of crustaceans, mainly Pleoticus muelleri and Peneidae, respectively. No significant differences were found between the diets of pelagic species, both piscivorous, occupying high trophic levels, typical of top predators of the food chain (4.4 and 4.8). The food niche overlap between them is intermediate (Ba = 0.54). The results suggest that there is some partition of food resources available in the environment. The diet of P. saltatrix is more diversified. The consumption of coió in summer and autumn deserves to be highlighted. Among the demersal species, no marked differences were observed either. Both species of stingrays consume mainly crustaceans and fish, occupying trophic levels between 3.8 and 3.9 and have low food niche overlap (Ba = 0.30). The generated results confirm that all species occupy high trophic levels and consume mainly fish and crustaceans. Seasonal variations in the diets of these species may be related to their availability. The low values of food niche overlap between species, linked to the diversity of food items available in the home range of the species, also suggest a condition of little interspecific competition.

5
  • RAQUEL CETTO SAMPAIO
  • Conservation of ant diversity in fragments of secondary forests: The effect of vegetation structure in different seasonal periods

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JARBAS MARCAL DE QUEIROZ
  • JAYME MAGALHAES SANTANGELO
  • DIEGO VINÍCIUS ANJOS SILVA
  • Data: Dec 4, 2023


  • Show Abstract
  • The destruction of forest habitats generates extremely fragmented areas and alterations in
    vegetation structure. This modifies the characteristics of micro-habitats and resource
    availability, affecting the diversity of animal species. Ants have become an important
    model for studying the effects of environmental disturbances on biodiversity because they
    exhibit high abundance, diversity, and ecological relevance. Some ant species forage for
    various resources on trees and shrubs; therefore, an analysis of vegetation structure can
    help understand the diversity patterns of these organisms. Abiotic factors, such as
    seasonality, can also influence ant community diversity. Based on this, the objective of
    this study was to investigate the distribution of species diversity of ants foraging on
    plants in fragments of secondary forests during different seasonal periods. The study was
    conducted in eight forest fragments in the region dominated by semi-deciduous
    ombrophilous forests in the Paraíba River Valley, State of Rio de Janeiro. Additive
    diversity partitioning, β diversity partitioning, and canonical correspondence analysis
    were used to measure the effect of seasonality and vegetation structure on the distribution
    of ant species diversity. The rainy season positively influenced the diversity of ants
    foraging on plants. Composition was affected by shrub leaf density in the rainy season
    and tree diameter in the dry season. Each fragment preserved a different set of ant
    species, and vegetation structure positively influenced ant diversity. These results
    highlight the importance of conserving the majority of forest fragments to better preserve
    the regional set of ant species.

Thesis
1
  • GUSTAVO COLAÇO GONÇALVES
  • rocky-outcrop, evolution, phylogenetic hypothesis, larvae, quasi-terrestrials, rock frogs, semaphoronts

  • Advisor : HELIO RICARDO DA SILVA
  • COMMITTEE MEMBERS :
  • HELIO RICARDO DA SILVA
  • JOÃO VICTOR ANDRADE DE LACERDA
  • VICTOR GOYANNES DILL ORRICO
  • RENATO NEVES FEIO
  • RACHEL MONTESINOS MARTINS PEREIRA
  • Data: Jan 25, 2023


  • Show Abstract
  • The neotropical genus Thoropa Cope is known for bringing together species that present
    reproduction and development associated with thin sheets of water that flow over rocky
    outcrops. Species in the genus have exotrophic and quasi-terrestrial tadpoles with
    morphological adaptations that allow survival in this microhabitat. Currently, seven species are
    recognized for the genus and recent phylogenetic hypotheses suggest distinct possibilities
    regarding taxa related to Thoropa. The consensus is that Thoropa composes the
    Cycloramphidae family together with the Cycloramphus species. Analyzes carried out so far
    based on morphology, evaluated a limited range of characters against the morphological
    diversity of the group. Here, with the evaluation of a set of larval and adult morphological
    attributes, I investigate which hypotheses can result and what these indicate about the
    proposition of taxa and the origin and fixation of characters associated with the evolution of
    the genus. To this end, the seven nominal species of the genus and 28 more for the outgroup
    were included, among members of the genus Cycloramphus, and of the families Alsodidae,
    Batrachylidae, Hylodidae, Rhinodermatidae and Telmatobidae, associated with
    Cycloramphidae in previous hypotheses. 125 characters from different sources were observed
    and described, which supported the construction of a matrix containing discrete morphological
    variations representing alternatives for the same homologous equivalent. The recombination
    between the proposals evaluated in the TNT program resulted in 110 equally parsimonious
    cladograms, each one having 359 steps. In a summary of these cladograms representing a
    consensus among these results, the seven species of Thoropa form a monophyletic group that
    presents four synapomorphies. The hypothesis also suggests that two groups exist in the genus,
    one group formed by species with small adult semaphoronts, Thoropa petropolitana group and
    another with larger traffic lights, Thoropa miliaris group. The Cycloramphidae family also
    appears as monophyletic. In addition to the results presented here, four works in which I appear
    as first author/collaborator were developed and published during the doctoral period,
    containing partial results of this research and extensive discussions on the larval morphology,
    ontogeny, systematics, and evolution of Thoropa and Cycloramphidae.

2
  • RÍSIA BRÍGIDA GONÇALVES CABRAL ALVES
  • Distribution patterns and community composition of waterbirds in wetlands in the state of Rio de Janeiro

  • Advisor : ILDEMAR FERREIRA
  • COMMITTEE MEMBERS :
  • AUGUSTO JOAO PIRATELLI
  • ILDEMAR FERREIRA
  • JARBAS MARCAL DE QUEIROZ
  • JAYME MAGALHAES SANTANGELO
  • LEONARDO SILVESTRE GOMES ROCHA
  • SALVATORE SICILIANO
  • Data: May 17, 2023


  • Show Abstract
  • Understanding how communities vary in space and time concerning environmental conditions
    and abiotic factors is essential to promote waterbird conservation, either in natural or human-
    altered areas. This work aimed to verify the effects of environmental heterogeneity and spatial,
    temporal, and weather variation on the distribution and composition of waterbird communities
    in continental wetlands. The community structure of waterbirds differed between lakes of
    artificial, natural, and temporary origin. Richness and abundance increased with increasing lake
    area and distance from human settlement; however, they decreased with increasing depth and
    extension of open surroundings. Abundance was also influenced by pH, increasing in sites with
    less acidic pH, and semi-shaded surroundings and grazing pressure, decreasing the number of
    individuals with the increase of these two variables. The environmental variables with the
    greatest contribution to the distribution of guilds were the lake area, pH, semi-shaded
    surroundings, distance from human settlement, macrophyte, and aquatic vegetation height. On
    the temporal scale, richness remained relatively stable, however, abundance increased over
    time. Temporal trends were also identified in species composition and dispersion patterns.
    Precipitation and temperature did not influence richness, indicating that the high number of
    resident species contributed to a relatively constant richness over time. However, variation in
    species abundance was inversely related to precipitation and temperature levels, which also
    influenced environmental conditions acting on the availability of resources and foraging sites
    for waterbirds. The results suggest that aspects of community structure, richness, abundance,
    and guilds, are uncoupled and respond in an independent and shared way to the effects of
    environmental and anthropic variables in inland lakes. Therefore, these aspects must be
    considered in a common framework when analyzing changes in the structure of waterbird
    communities.

3
  • BIANCA FERREIRA DA SILVA LAVISKI
  • Seed dispersal by ants in areas of different ages of restoration in the Atlantic Forest

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JARBAS MARCAL DE QUEIROZ
  • ALEXANDRA PIRES FERNANDEZ
  • FABIO SOUTO DE ALMEIDA
  • ALEXANDER VICENTE CHRISTIANINI
  • ANA GABRIELA DELGADO BIEBER
  • Data: Jul 5, 2023


  • Show Abstract
  • Seed dispersal is an essential process in the structuring of plant communities. The current loss of dispersers due to habitat loss and defaunation makes it important to evaluate the execution of this service. Ants are organisms capable of performing primary and secondary dispersal of several plant species, allowing a refinement of primary dispersal. Its presence in diverse terrestrial habitats means that this seed dispersal can occur frequently, including in recently restored areas. The objective was to evaluate how the ecosystem service of seed dispersal
    performed by ants is recovering in restored areas compared to reference areas. The work was carried out at the Guapiaçu Ecological Reserve (REGUA), in Cachoeiras de Macacu, RJ, in restored areas and reference areas for evaluating the secondary dispersal process carried out by ants. The first two chapters analyzed myrmecofauna interacting with natural fruits (chapter 1) and artificial fruits (chapter 2) and the biotic and structural factors influencing these interactions. The third chapter analyzed the effect of Ectatomma permagnum nests on seedling
    richness and abundance, as well as the physical and chemical soil attributes of these nests and the density and distribution of nests in the areas. Interactions were observed in six areas in a total of four transects of 200 m each, with four restored areas and two reference areas. For interactions with natural fruits, interactions were observed monthly over 12 months. A total of 110 interactions were found between 28 species of plants and 23 species of ants of which 52 interactions occurred in the restored áreas over a year of observation. With artificial fruits, 251 interactions were observed with 23 species of ants and a total of 103 removals. Networks of
    restored and reference areas showed similar patterns. Solenopsis invicta was the central species in the interactions with natural fruits, indicating a strong dominance of the species and that the areas are still recovering, with a low number of diaspore removals by ants and few interactions with high quality disperser species. In artificial fruits, there was no difference in richness and removal of fruits in restored and reference areas and absence of influence of structural factors. Species composition was different between restored and reference areas. The indicator species in the reference habitat was Wasmannia auropunctata and in the restored habitat were Pheidole subarmata and Atta sexdens. Interactions may be limited by the recovering community and the strong dominance of some ant species, as in natural fruits. However, the absence of differences
    between restored and reference habitats in the characteristics studied in the two chapters indicates that the ecological process is carried out at the same level in both and is in the process of recovery. Ectatomma permagnum showed low nest density, being slightly higher in the newest restored area, indicating that the activity of this species may be higher in recently restored areas. Nest distribution was random, indicating low intraspecific competition. The soil near and far from the nests did not differ in nutrient concentration. Therefore, the species does  not seem to favor the recycling of nutrients in the environment under the influence of the nests. However, E. permagnum favored a higher abundance of seedlings in the nests, probably due to the diaspore removal activity of the species. Their activity leads to the increase of seedlings in their nests. Considering that all areas have a considerable restoration time and have nutrients necessary for the good development of seedlings, we can consider the species with a positive effect for seed dispersal and restoration of areas.

4
  • MARIANA SAMPAIO CASIMIRO
  • MONITORING FOREST RESTORATION: THE EFFECT OF FOUR SPECIES OF TREE PLANT ON THE ARTHROPOD COMMUNITY IN THE ATLANTIC FOREST
  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JARBAS MARCAL DE QUEIROZ
  • ALEXANDRA PIRES FERNANDEZ
  • FABIO SOUTO DE ALMEIDA
  • RICARDO ILDEFONSO DE CAMPOS
  • ANDRÉ BARBOSA VARGAS
  • Data: Sep 28, 2023


  • Show Abstract
  • Tropical and subtropical forests are being highly impacted by human actions, with
    restoration being a human responsibility. The restoration of degraded areas has been
    consolidating itself as an important strategy for environmental adaptation, becoming of
    paramount importance in the conservation of local and regional biodiversity. To enhance
    the success of the restoration, it is important to ensure good planning of all stages, which
    includes the selection of tree species to be introduced, as in the case of active restoration.
    Tree species have a distinct ability to alter abiotic and biotic conditions, and a single tree
    species can be associated with a wide range of fauna. Thus, a better understanding of the
    interactions of tree species used in reforestation of tropical areas with other organisms and
    what are the effects of their characteristics on the community that live below their canopy
    is very important to achieve successful restoration of reforested areas. This work consists
    of three chapters that approach biological data in a different way, all with the objective of
    analyzing the influence of four tree species on the community that lives below its canopy.
    In the first chapter, which addresses the effect of tree species on the arthropod community,
    tree species did not directly influence the arthropod community, but these effects are being
    driven by indirect relationships. In the second chapter, tree characteristics mediated their
    effect on ant species composition. However, this effect is not as clear as the richness of ant
    species and composition of functional groups. In the third chapter the environmental
    variables, often linked to the identity of the tree, are preponderant for the relationship of
    the biological community, more specifically ants, other arthropods and regenerating plants.

5
  • OSÉIAS MARTINS MAGALHÃES
  • Phylogenetic analysis of Rhagovelia Mayr, 1865 (Insecta: Heteroptera: Veliidae) from the Americas

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • LEANDRO LOURENCO DUMAS
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • CLEBER GALVÃO
  • JADER DE OLIVEIRA
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • JULIANNA FREIRES BARBOSA
  • BRUNO CLARKSON MATTOS
  • Data: Sep 29, 2023


  • Show Abstract
  • Members of the genus Rhagovelia Mayr, 1865 (Hemiptera: Heteroptera: Gerromorpha:
    Veliidae: Rhagoveliinae) are commonly found in tropical aquatic habitats, forming the
    dominant guild of predatory insects of the neustonic fauna. In the Americas alone, there are
    about 200 described species. The genus is easily recognizable by the distal tarsomere of the
    middle leg deeply cleft and bearing a feathery fan. Currenly, the American fauna of
    Rhagovelia is subdivided into 18 species groups, which in turn compose one grade and five
    complexes, in addition to species without defined position. Despite being recovered as
    monophyletic in all phylogenetic analyses performed so far, the relationships between such
    supraspecific groups and their monophyletic conditions have never been truly tested. By
    examination of the literature and 300 specimens, representing the taxonomic groups defined
    in previous works, 10 characters already used in publications, 20 characters adapted from
    the literature and 16 new characters were selected, totaling 46 discrete morphological
    characters, being 38 binary and 8 multistates. Phylogenetic analyses were performed through
    heuristic search using TNT 1.6 no taxon limit and by Bayesian Inference using MrBayes
    3.2.2. The monophyletic conditions of the following clades have been recovered: genus
    Rhagovelia, subgenus Trochopus Carpenter, 1898 stat. nov., angustipes, collaris, obesa,
    robusta and varipes complexes, and cali, elegans, hambletoni, hirtipes, itatiaiana, lucida,
    obesa, salina, secluda, tayloriella, torquata, varipes and whitei groups. The following groups,
    however, are not monophyletic: ainsliei, armata, bisignata, robusta and spinigera. Rhagovelia
    gaigei Drake & Hussey, 1957 and R. roldani Polhemus, 1997 did not cluster with any
    supraspecific group, forming successive terminal branches close to (robusta complex +
    Trochopus). Recovering the usage of the subgenera Rhagovelia s. str. and Trochopus is
    suggested, as well as name changes, from bisignata group to angustipes group, from
    tayloriella group to collaris group and from torquata group to abrupta group.

6
  • LUCAS DE ASSIS SILVA ANDRADE
  • Diversity and distribution of coccidia from wild birds on Marambaia Island: identification of new species, genotypes, 
    hosts, locations and Pseudoparasitism
  • Advisor : BRUNO PEREIRA BERTO
  • COMMITTEE MEMBERS :
  • ILDEMAR FERREIRA
  • BRUNO PEREIRA BERTO
  • SERGIAN VIANNA CARDOZO
  • LÚCIO ANDRÉ VIANA DIAS
  • MARIANA DE SOUZA OLIVEIRA
  • Data: Oct 30, 2023


  • Show Abstract
  • The Atlantic Forest is one of the priority biomes of the World to be restored. Approximately 70% of the Brazilian population depends on the ecosystem services of this biome, however, it is at a high level of threat and risk. Marambaia Island is a conserved area of this biome, located on the Costa Verde coast, south of the State of Rio de Janeiro. Knowledge of the ecology of wild birds is extremely important for the conservation of the Atlantic Forest and, therefore, Marambaia Island. Free-living birds coexist with numerous parasites in conserved environments, but they tend to suffer from parasites, especially coccidiosis, when in impacted environments. Coccidiosis is a disease caused by coccidia chromists, which form a diverse and complex taxonomic group. The Passeriformes order is mainly parasitized by coccidia of the genera Isospora and Eimeria, which belong to the Eimeriidae family. In this context, the main objective of the present study was to identify (morphologically and molecularly) and quantify coccidians parasites of wild birds of different species, families and locations within and adjacent to Marambaia Island. In this sense, this thesis presents a review of the scientific literature on the themes of ecology and taxonomy of coccidians of wild birds, and in chapters I, II and III, morphological and molecular identifications of coccidian species from wild birds captured in and around Marambaia Island, including a new species named Isospora juruviarae Andrade & Berto, 2023. Finally, chapter IV covers the survey and monitoring of identifications and densities of coccidians in the different orders and families of wild birds captured in and around Marambaia Island in the period from 2019 to 2023.

7
  • WELLINGTON THADEU DE ALCANTARA AZEVEDO
  • Study of the Dipterofauna (Calliphoridae and Mesembrinellidae) in forest, rural and urban areas of the State of Rio de Janeiro

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • BARBARA PROENCA DO NASCIMENTO
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • VALÉRIA CID MAIA
  • CLAUDIA SOARES SANTOS LESSA
  • Data: Dec 19, 2023


  • Show Abstract
  • The Atlantic Forest is a diverse biome, including more than 15,000 species of endemic
    vascular plants. It is under constant pressure due to human action, resulting in the
    fragmentation of its habitat, intensifying the edge effect. The objective of this study was to
    study the fauna of Calliphoridae and Mesembrinellidae in three environments, forest, rural
    and urban, in the state of Rio de Janeiro; study the edge effect in the forest environment,
    evaluate the attractiveness of these diptera by two stages of bait decomposition; and identify
    bioindicators for each environment. Two traps were installed at each sampling point
    containing preserved beef liver bait. The edge effect was evaluated at five sampling points
    along 800 meters from the edge towards the interior of the forest in the Parque Estadual dos
    Três Picos, with the vegetal characterization of each point. To study bait attractiveness at
    different stages of decomposition and synanthropy, two traps containing bovine liver bait with
    48 hours of decomposition were added, considering only the innermost point of the forest
    environmen, and two additional collection points were studied: rural environment, Seropédica
    campus (UFRRJ); urban environment, Urca campus (UNIRIO). Samples were collected
    quarterly, between June 2021 and May 2023. The specimens were sacrificed using a lethal
    solution, transferred to the laboratory and identified. A total of 5,476 dipterans were collected,
    of which five were Calliphoridae (77.1%) and 11 were Mesembrinellidae (22.9%). Seven
    species occurred commonly, one rarely, five constant, and seven accidentals. Huascaromusca
    aneiventris and Paralucilia nigrofacialis showed a preference for environments with higher
    canopy coverage. Eumesembrinella cyaneicyncta and Hemilucilia benoisti were related to the
    points at 0 and 200 meters. Laneella nigripes was more abundant in the innermost points.
    Mesembrinella bellardiana was more abundant at the intermediate points. Hemilucilia
    segmentaria and L. eximia were abundant along the gradient. Mesembrinella semihyalina was
    negatively correlated with CAP and plant density. Hemilucilia benoisti was negatively
    correlated with canopy covering. Species of the genus Hemilucilia, Lucilia eximia, P.
    nigrofacialis, M. bellardiana and M. peregrina were correlated with precipitation, temperature
    and/or relative humidity. The diversity profile of Rényi varied throughout the collection
    period, with higher richness and diversity in winter and lower in autumn. La. nigripes showed
    a preference for liver baits with 48 hours of putrefaction. The species of Mesembrinellidae
    occurred exclusively in the forest environment, in addition to H. benoisti and P. nigrofacialis,
    being asynanthropes. Hemilucilia segmentaria and H. semidiaphana were also asynanthropes,
    but occurred in urban and/or rural environments. The genera Chrysomya and Cochliomyia,
    and Lucilia cuprina, were synanthropes. Eight potentially bioindicator species were identified
    for the forest environment, especially La. nigripes, M. bellardiana and L. eximia, and four for
    rural environments, especially Cochliomyia macellaria. This is an unprecedented study in
    PETP. It is valuable information about the ecology and distribution of Calliphoridae and
    Mesembrinellidae in different environments, being reported the first occurrence of M. currani
    in this biome, as well as these families’ potential as environmental indicators and its behavior
    in relation to the decomposition stage of the bait. These findings may contribute to
    conservation studies and environmental monitoring in the studied region.

2022
Dissertations
1
  • TÂNIA CRISTINA DA SILVA
  • Penis morphology Sphiggurus villosus (F. Cuvier, 1823) (Erethizontidae, Rodentia)

  • Advisor : MARCELO ABIDU FIGUEIREDO
  • COMMITTEE MEMBERS :
  • MARCELO ABIDU FIGUEIREDO
  • LYCIA DE BRITO GITIRANA
  • PAULO DE SOUZA JUNIOR
  • Data: Jan 27, 2022


  • Show Abstract
  • The Order Rodentia has a greater number of species, with significant diversity occupying different environments, habits and ecological niches. Studying comparative anatomy can provide information that will serve as a basis for large areas of biological sciences and biomedicine, and, based on this premise, the study aimed to describe the morphology of the S. Villosus hedgehog penis. Fifteen specimens donated by the Serra dos Órgãos National Park to the Department of Animal and Human Anatomy of the Federal Rural University of Rio de Janeiro (UFRRJ) were used. hese were fixed with perfusion of 10% formaldehyde solution, placed in polyethylene boxes and,later, dissected. The dissections were carried out with an incision in the preputial ostium and all the surrounding skin involving the region and the entire circumscribed area along with the perineal region, in order to expose the genitalia, as well as observe the anatomical regions of the penis, its morphology and the static muscles. From the anatomical characterization in loco, the penises were excised at the root and taken to the Integrative Histology Laboratory (UFRJ) to be included in the histological routine and histochemical and immunohistochemical techniques were performed.The macroscopic and microscopic findings of the penis of Sphiggurus villosus, allowed the identification of muscles. ischiocavernous and bulbospongiosus, constituting the root of the penis (radix penis). This cylindrical structure follows cranially arranged being continuous with the body (penis body). From each sample, cuts were made from the region of the penis body with 5 micrometers in thickness each, for each type of coloration. Hematoxylin-eosin, Mallory's Trichrome, orcein and Picrosirius red stains allowed the characterization of the elements of the extracellular matrix. The immunohistochemistry technique with anti-alpha-actin antibody was performed to mark the muscle cells. Scanning electron microscopy allowed the characterization of the surface of the penis of S. villosus, demonstrating the disposition and morphology of the spinous protuberances in the region of the glans penis. he results of the histochemical and immunohistochemical analysis of the penis of S. villosus revealed a musculocavernous type of histoarchitecture. he results of this research allow us to understand aspects of the reproductive behavior of these species, in order to improve the management of animals in captivity.

2
  • THAMIRES BRAZIL MARTINS MACHADO
  • Dormant stages of zooplankton: morphological variation between species and effects of desiccation duration on hatching

  • Advisor : JAYME MAGALHAES SANTANGELO
  • COMMITTEE MEMBERS :
  • HELIO RICARDO DA SILVA
  • JAYME MAGALHAES SANTANGELO
  • RAYANNE BARROS SETÚBAL
  • CLAUDIA COSTA BONECKER
  • Data: Feb 22, 2022


  • Show Abstract
  • The presence of dormant stages is a key feature in the life cycle of zooplanktonic organisms. The presence of resting eggs and the existence of eggs banks in the sediment are considered as a temporal refuge against adverse conditions, enabling the reestablishment of communities after favorable conditions resume in the environment. This study is divided into two approaches described in two chapters, both using egg banks from permanent lakes. In the first one, a quantitative comparison was performed on the morphology of cladoceran resting eggs (and their ephippia), sampled from 4 different lakes, and looking for similarities and metrics that may help in the taxonomical identification of the species. This morphometric approach found that ephippia descriptors such as height, width and area of the ephippia can be summarized in just one measurement, as these descriptors are highly correlated. However, it is important to considerif the use of morphology for species identification outweighs the hatching of resting eggs, due to technological costs and available time. The results presented here also created of a photographic catalog with eggs from different species, for greater readiness in identifying the egg bank community. In the second approach, the effect of desiccation of sediment on hatchling communities was experimentally evaluated, seeking to assess how communities recover after atypical drought events in permanent lakes. For the response variables abundance, composition and species richness in different communities, sediment samples were taken in 4 different lakes. A complementary experiment was aimed to recognize the effects of desiccation at the population level, so replicates were taken from a single lake. At the population level, a calanoid copepod, Notodiaptomus iheringi, was found. This species showed more hatchlings in longer desiccated sediments. Desiccation increased the number of hatchlings in both experiments when compared to humid sediments, implying that resting eggs of some species are able to survive desiccation for at least 9 months, so desiccation can be considered as one of the possible cues to stimulate hatching. Climate change models predict an increase in drought cycles for many regions of the world, so future studies are desirable in order to determine which species eventually benefit or are vulnerable to drought periods.

3
  • LUANA DA SILVA NASCIMENTO
  • Influences and changes in the metabolic profile of Alphitobius  diaperinus (Coleoptera:Tenebrionidae) in its use as a polystyrene biodegrader

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • EMERSON GUEDES PONTES
  • JAYME MAGALHAES SANTANGELO
  • LUCIANO APARECIDO MEIRELES GRILLO
  • Data: Feb 24, 2022


  • Show Abstract
  • The world production of plastics has increased very quickly in the last 50 years, with emphasis on the Chinese production, responsible for ¼ of the world production. To date, no environmentally friendly method is available to dispose of plastic waste, which accumulates in landfills or is scattered as microplastics.
    In this context, biodegradation emerges as a sustainable alternative, as it consists in the mineralization of these materials through submission to microbial metabolism. Current research has reported that some coleopteran species are able to degrade plastics with the aid of their chewing mouthparts and the metabolic activity of their intestinal microbiota. This study shows that Alphitobius diaperinus is able to feed on and apparently degrade polystyrene. The metabolic profile of larvae fed with poultry feed, submitted to absolute fasting and fed with polystyrene were characterized. As well as monitoring their development, dry weight and digestive tract integrity.
    More than 60 metabolites were found and among them the metabolites of the polyalcohol, nitrogen and amino acid classes in A. diaperinus larvae submitted to fasting and in the Polystyrene (PS) diet had a significant increase in relation to larvae fed with ration for birds. Showing that even if they were able to chew/crush polystyrene, the metabolism of larvae fed with PS is very similar to that of larvae in fasting condition.
    Despite this, this research supports the notion that while synthetic molecules, unlike most natural compounds, do not generally enter the natural food chain to be degraded by environmental microbiota, some species of alternative plastic degraders may be able to decompose plastics. In view of the results found, it appears that the present study will contribute in the long term to provide an adequate, sustainable and profitable management of these post-consumer materials.

4
  • JAQUELINE DA SILVA MACÊDO
  • Morphometric and histological study of the gastroesophageal tube of the Blue-fronted Parrot (Amazona aestiva Linnaeus, 1758), Birds, Psittaciformes, Psittacidae in captivity and their importance for biodiversity.

  • Advisor : ILDEMAR FERREIRA
  • COMMITTEE MEMBERS :
  • APARECIDA ALVES DO NASCIMENTO
  • ILDEMAR FERREIRA
  • LUCIANO DA SILVA ALONSO
  • ANA LUIZA BASTOS
  • CLARICE MACHADO DOS SANTOS
  • Data: Mar 7, 2022


  • Show Abstract
  • This study aimed to describe morphological aspects of the gastroesophageal tract of Amazona
    aestiva (Linnaeus, 1758). Structures were described to add new information about the
    morphology of the digestive tract, thus contributing to conservation, through "ex-situs"
    studies and in the management and clinical of this species. These animals are considered seed
    dispersers, contributing to ecological balance. Despite its importance in the ecosystem, it is
    listed with imminent danger of extinction. The esophagus, inlugvium, proventrlic and
    ventricle of A. aestiva a. present histological similarities between birds of other taxonomic
    groups, however interspecific characteristics were observed, this includes the absence of
    mucous glands, accumulation of melanocytes in the esophageal epithelium, alternations of
    muscle fibers and elastic fibers in significant amounts in muscle tissue in the structure of
    inlugvium, and distribution of serotonin-producing cells (5-HT) in the proventricle and
    ventricle. The p-value indicates that there was no significant difference between the two sexes
    of A.aestiva when comparing the means of the total length of the bird and length of the organ
    follow-ups: cervical esophagus, inluvium, thoracic esophagus, proventrlicle and ventricle. The
    information was collected and compared with references to studies already conducted in other
    bird species. These characteristics may be the functional adaptation of the eating habit, which
    contributes to the comparative morphology of birds and with information for applied research,
    serving as a species of experimental model, besides contributing to the management of these
    animals conservation centers, creations, and ecological reserves. Due to the particularities
    related to different types of diet, especially in wild birds, the morphological study of the
    digestive system is fundamental for the knowledge of aspects related to physiology and
    phylogeny studies on system digestive of wild birds.

5
  • MILAINE SILVANO DA FONSECA
  • Importance of spatial scales on the structure and beta diversity of reef fish assemblages in Ilha Grande Bay, RJ

  • Advisor : LEONARDO MITRANO NEVES
  • COMMITTEE MEMBERS :
  • FABIO SOUTO DE ALMEIDA
  • LEONARDO MITRANO NEVES
  • LUIS FELIPE SKINNER
  • RAFAEL DE ALMEIDA TUBINO
  • Data: Mar 16, 2022


  • Show Abstract
  • Understanding the influence of spatial scales on biodiversity is essential to determine which
    conservation measures should be implemented at the sites in a region. Reef fish are a
    fundamental component for the functioning of reef ecosystems and have been threatened by
    impacts that occur at local and regional scales. Detecting which spatial scales are associated
    with greater variation in assemblage composition is crucial to identify the processes in the
    habitat that promote this pattern and propose effective conservation measures. The objectives
    of this study were: (1) to quantify the spatial variation of reef fish assemblages at scales from
    tens of meters to tens of kilometers, and (2) to determine whether there are patterns of beta
    diversity at these spatial scales. The tested hypotheses were that (1) there is a positive
    association between habitat heterogeneity and beta diversity, and (2) that smaller spatial scale
    leads to greater heterogeneity and beta diversity. These components of fish assemblage
    diversity (beta diversity) and habitat (habitat heterogeneity) were evaluated at a local spatial
    scale (between transects of sites) and a larger spatial scale (between sites of regions). Five
    regions were established in Ilha Grande Bay, with 2 covering deeper locations and increased
    distances from the coast (Ilha Grande and Canal Central), and 3 with shallower locations, close
    to the coast and under estuarine influence (Ribeira Bay, Mambucaba and Paraty). At each site,
    4-6 transects were sampled, totaling 289 transects. The difference in fish assemblage structure
    across spatial scales was tested using permutational multivariate analysis of variance
    (PERMANOVA) based on the Bray-Curtis index. The variation in species composition across
    spatial scales (beta diversity) was tested with analysis of the Homogeneity of Multivariate
    Dispersions (PERMDISP) based on the Jaccard index, while the components of nestedness and
    turnover were obtained by the BetaPart package. The greatest variability in fish assemblage
    structure occurred between sites within each region (Pseudo-F = 3.9, p=0.0001, ECV = 26%).
    Distance from the coast and benthic cover were the best predictors of assemblage structure. An
    assemblage of predatory fishes of mobile and carnivorous invertebrates characterized the
    samples from the Ribeira and Paraty bays, while a richer assemblage with fish from multiple
    trophic groups represented the samples from the Central Channel, Ilha Grande. Beta diversity
    varied within sites (F=4.241, P=0.0001) and regions (F=4.7173, p=0.0163). However, the local
    scale presented the highest Jaccard dissimilarity, with the turnover component as the main
    contributor, while in the regions the Jaccard dissimilarity decreased, and the contribution of
    turnover and nestedness were more uniform. Beta diversity was positively correlated with
    habitat heterogeneity (p<0.01), with the Ilha Grande sites being more heterogeneous compared
    to the Ribeira and Paraty bay sites. The variation of the fish assemblage at the scale of the sites
    was associated with the heterogeneity of the habitat, while the impacts associated with the
    influence of rivers and proximity to the coast were associated to assemblages’ differences at
    the scale of the regions. Conservation measures should consider the heterogeneity of habitats
    and the usage history at the scale of sites, and actions that minimize the effects of broader and
    more diffuse impacts at the scale of regions.

6
  • WESLEY DUARTE DE SOUZA
  • Species composition and spatio-temporal patterns of catches from recreational fisheries in Sepetiba Bay, Rio de Janeiro, Brazil
  • Advisor : RAFAEL DE ALMEIDA TUBINO
  • COMMITTEE MEMBERS :
  • KÁTIA DE MEIRELLES FELIZOLA FREIRE
  • ACACIO RIBEIRO GOMES TOMAS
  • LEONARDO MITRANO NEVES
  • MAGDA FERNANDES DE ANDRADE TUBINO
  • RAFAEL DE ALMEIDA TUBINO
  • Data: Apr 28, 2022


  • Show Abstract
  • Recreational fishery is a sport and leisure activity, practiced by a large number of people around the world, without the objective of commercializing the catches. In recent decades, this practice has shown a significant increase, especially in urban centers of developing countries. Despite the sporting characteristics, this modality can affect different populations of marine fish, especially in coastal environments used as breeding and growth areas. The lack of information on species composition and volume of catches, especially in coastal environments, represents an important gap to be filled. In this context, this work aims to investigate the composition of species captured by recreational fishing developed in Sepetiba Bay (RJ), one of the most important coastal environments in southeastern Brazil. Primary data, from capture records, were obtained from a program of systematic monitoring of fisheries carried out with small and medium-sized boats, in addition to kayaks, between October 2019 and September 2020. Were recorded 1,190 fisheries (85 boats and 77 anglers). The total volume of fish caught was 63,479.7 kg in 12,268 hours of fishing, generating a fishing yield (CPUE) of 53.3 kg/trip, 7.1 kg/fisher and 5.2 kg/hour. Were recorded 52 categories of species in 42 fishing grounds. The most frequent species were corvina – Micropogonias furnieri (45.0%), robalo-peva – Centropomus parallelus (26.9%), bagre – Cathorops spixii and Genidens genidens (17.6%), cocoroca – Orthopristis ruberHaemulon steindachneri and Haemulopsis corvinaeformis (16.7%), espada – Trichiurus lepturus (14.7%) and peroá – Balistes capriscus (11.6%). The most important species in terms of capture volume were T. lepturus (23.4%), B. capriscus (13.8%), olho-de-cão – Priacanthus arenatus (10.0%), M. furnieri (9.2%), dourado – Coryphaena hippurus (6.6%) and pargo – Pagrus pagrus (5.7%). The species with the highest frequency of release were C. spixii and G. genidens (58.9%), cação-viola – Pseudobatos percellens (55.6%) and baiacú – Chilomycterus spinosus (53.6%). The captures carried out in kayaks were essentially concentrated in the inner zone and on the robalo-flecha (C. undecimalis). The greatest richness of species, as well as the greatest number of fisheries (47.3%) were registered in the outer zone of the bay. More than half of the captures were carried out in points with a rocky bottom and those with natural baits (shrimp and sardines). The main seasons for the largest number of fishing were spring (27.9%) and winter (27.8%). Apparent seasonal patterns of fishing yield were verified for oceanic species (P. arenatusP. pagrus and C. hippurus), mainly during autumn and winter. The maximum weight variations of the species indicated seasonality trends for M. furmieriP. saltatrix and T. lepturus. Despite the captures accessing a wide variety of species, the variations registered determine an evident spatio-temporal differentiation pattern. The identification of species composition in catches and the recognition of variation patterns in space and time constitute fundamental information for the assessment of possible impacts on fish populations and contribute to the construction of a more comprehensive scenario from an ecosystem point of view.

7
  • GUSTAVO HENRIQUE SOARES GUEDES
  • Application of underwater drones in the environmental monitoring of inland waters: accessing the vertical distribution of fishes and the selectivity of the method

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • UWE HORST SCHULZ
  • ROSANA MAZZONI BUCHAS
  • FRANCISCO GERSON ARAUJO
  • JAYME MAGALHAES SANTANGELO
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • Data: Jun 7, 2022


  • Show Abstract
  • new approach for visual fish survey in reservoirs using underwater drones (remotely operated vehicle- ROV) is presented. The ROV was applied to identify abiotic gradients and to compare fish assemblages on the steep slopes in a tropical reservoir. The tested hypothesis is that fish are concentrated in the littoral zone due to the better physicochemical and habitat conditions, compared to deep and hypoxic layers. Twelve species were recorded (seven native, five non-native, with all species occurring in the littoral zone (1-7 meters deep), seven species in the transition (7-15 m), and four in the profundal zone (> 15 m). A greater fish abundance and richness was found in the littoral zone corroborating the hypothesis. The littoral zone was dominated by non-native cichlids (Cichla spp., Coptodon rendalli), while native catfish (Loricariichthys castaneus, Pimelodella lateristriga) occupied deeper areas. The fish distribution seems to be driven by local factors, such as oxygen availability and habitat structure. The preference for the littoral zone by alien cichlids may have led to the extirpation/decrease of native characids and induced catfishes to occupy deep habitats. Underwater drones can be a valuable tool for the simultaneous collection of abiotic/biotic data, especially in deep reservoirs with complex habitats, resulting in advances in the environmental monitoring of inland waters.

8
  • MARIANA ROMANINI MENEZES
  • Stingers and thorns: the community of flower visitors hymenoptera from the Botanical Garden of UFRRJ and the factors that affect flower visitation

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JARBAS MARCAL DE QUEIROZ
  • MARCELO DA COSTA SOUZA
  • TATIANA FABRICIO MARIA
  • Data: Oct 17, 2022


  • Show Abstract
  • The Hymenoptera order includes several flower-visiting insects (e.g. ants, bees, and wasps) and the coexistence of many different species in the same community can generate interspecific competition. Notwithstanding shared communities, research which evaluates how these taxonomic groups influence a whole community of flower-visiting Hymenoptera is lacking. Moreover, abiotic factors can also impact these floral visits, because each organism responds differently to climatic variations. The goal of this study is to evaluate abiotic factors, specifically relative air humidity and air temperature, which may be able to impact the number and the frequency of interactions between hymenopterans and flowers and to assess the composition and niche organization, by making use of interaction networks, of the entire community of flower-visiting Hymenoptera at the botanical garden of the Universidade Federal Rural do Rio de Janeiro. For the duration of a year, samples were made in that botanical garden, compartmentalizing the collections temporally in accordance with the time of the insects' shift (morning or afternoon). A positive influence of air temperature on the number of ant interactions and visits were observed. It is also possible to observe that most of these interaction networks exhibited a nested and non-modular pattern and an average level of network specialization. In addition, bees stood out as the species with the highest frequency of visits and with the most generalist behavior. This study demonstrates how a botanical garden can sustain a diverse community of floral visiting Hymenoptera in an urban environment and why it consists in an important tool for biodiversity conservation.

9
  • PAULA FERREIRA GROSSI
  • Litter ant community structure: the influence of tree species and sampling techniques

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JARBAS MARCAL DE QUEIROZ
  • JAYME MAGALHAES SANTANGELO
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • Data: Nov 4, 2022


  • Show Abstract
  • Among the organisms that are found in the litterfall, the ants stand out for their abundance, frequency and diversity. The litterfall is a food source and shelter for many ant species. In forests, the amount and quality of the litterfall should vary temporally and spatially. These variations are connected to the phenology of the different species of trees that are found in tropical forests. The presented research had the objective to verify if the pattern of the ants assembly diversity under the treetopof diferente tree species used in reforested sites of Atlantic Forest is influenced by the collection techniques. The techniques used for ant collection were the Winkler extractor and the fall trap (pitfall). Fifty four species and twenty-three ant genres were collected in a total of forty four samples of each technique. The effect of the collection technique on the species richness was marginally significant, but there weren't statistically significant effects of the species or functional group of trees or significant effect of the interaction between trees and the collection technique. The composition of the ants assemblies in the samples was as influenced by the trees species as the collection technique, but there wasn't statistically significant interaction between the two factors. The association of collection techniques are demonstrated adequate to evaluate the richness and the ants composition of the studied site, corroborating with the literature.

10
  • LEONARDO ALMEIDA FREITAS
  • Taxonomic and functional diversity of ichthyofauna along a gradient of marine influence in a tropical bay

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • ELLEN MARTINS CAMARA
  • FRANCISCO GERSON ARAUJO
  • HELAINE DA SILVA MENDONÇA
  • LUISA RESENDE MANNA
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • Data: Nov 23, 2022


  • Show Abstract
  • Understanding the patterns and processes that lead to the distribution of species in the environment is essential to make predictions to protect ecosystems and facilitate the rational exploitation of resources, being one of the most important issues in applied ecology studies. The present study aimed to assess the taxonomic and functional diversity of the ichthyofauna in a tropical semi-enclosed coastal system and to detect eventual spatial changes influencing fish diversity. We also sought to associate differences in fish assemblages with the gradient of marine influence, considering the three zones of the Sepetiba Bay (inner, middle and outer). Fish sampling, using bottom trawls and measurements of environmental variables were performed concurrently, using a standardized protocol in the three zones and four seasons to enable spatial and temporal comparisons. Seventeen quantitative morphological measurements of 5 to 6 adult fish for each species were used to determine 15 functional traits related to food acquisition and locomotion. Three taxonomic diversity indices (Shannon, Simpson and Pielou) and six functional diversity indices (richness, evenness, divergence, dispersion,  originality and specialization) were used. Water transparency and depth were higher in the outer zone compared to the inner zone, whereas pH (lower in winter), salinity (higher in summer compared to spring) and temperature (higher in summer) changed seasonally. An increase in species richness and a concomitant decrease in fish abundance and biomass were observed from the inner to the outer zone, with fish assemblages differing between the three zones. The Shannon and Pielou taxonomic diversity indices were higher in the outer zone, while the Simpson&#39;s dominance was higher in the inner zone, and did not differ among the seasons. Six functional groups were distinguished, with one of them (marine catfish) very abundant, predominating in the inner zone, and contributing to reduce the divergence. On the other hand, a very diverse group (richness) was predominant in the external area, contributing to increase the redundancy in this area. Most functional indices were higher in the outer zone, except for functional originality and specialization, confirming the greater redundancy of functional tracts in this zone. However, significant differences were found only for Functional Divergence, which was lower in the inner zone, indicating that less abundant species present more specialized traits. Due to the lower redundancy of functional traits, especially in low abundant species, the inner zone should be prioritized in conservation policies, as the loss of species could affect the ecosystem roles played by them, thus guaranteeing the preservation of functional characteristics as well as the sustainable use of available resources.

11
  • DANDHARA ROSSI CARVALHO
  • β-taxonomic and functional diversity as tools for evaluating the effects of Small Hydroelectric Power Plants on the ichthyofauna of a tropical river

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • BIANCA DE FREITAS TERRA
  • FRANCISCO GERSON ARAUJO
  • JAYME MAGALHAES SANTANGELO
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • TAYNARA PONTES FRANCO
  • Data: Nov 25, 2022


  • Show Abstract
  • Dams construction blocks lotic systems, creating physical barriers that modify the physical-chemical local conditions and alter the flow regime. The new environment formed prevents the free migration of the ichthyofauna and other aquatic organisms that inhabits the lotic environment that need to pass through the filters of the lentic environment. This environment, with lentic characteristics, facilitates the entry of non-native species, which may lead to the extinction of native species, especially those that are more specialized and more sensitive to new environmental conditions. Damming of tropical rivers has been one of the main threats to aquatic biodiversity, and it has occurred on an unprecedented scale. One way out for medium and small rivers is the construction of Small Run-of-Run Hydroelectric Power Plants (SHPs), as they present reduced flooding areas and do not form large reservoirs. However, the real influence of SHPs has been questioned as to their effects in ichthyofauna compared to large dams. In this context, the present study aimed to evaluate the influences on the ichthyofauna of two PCHs built in the middle section of the Paraíba do Sul River, a lotic system of great importance for the water supply of the state of Rio de Janeiro. This study aimed to assess influences on the ichthyofauna of two Small Power Plants (SPPs), built in the middle section of the Rio Paraiba do Sul. Three periods were selected: 1) a period with a totally lotic scenario, before the construction of the two SPPs (2008 - Pre); 2) a period immediately after the construction of the PCHs (2012 - Post); and 3) a period of a decade after the construction of these dams (2021 - Current). Seasonal comparisons were also made among three hydro-environmental conditions: 1) wet, between January and March; 2) dry, between July and August; and 3) transition, between September and October. To assess these changes in ichthyofauna, taxonomic and functional β-diversity were used, since they assess changes in species occurrence and serve to assess both species/function replacement (turnover) and species/function loss (nestedness) in relation to the pool available regionally. For the determination of 10 functional tracts, 12 quantitative morphometrical measures related to habitat use, feeding and locomotion of the species were taken. That ichthyofauna composition varied between periods, although seasonal variations were less conspicuous. Higher richness was recorded in the Post and lower in the Current period. Abundances decrease considerably in the Current period. The taxonomic and functional β-diversity increased over the three periods, with the taxonomic having increased significantly in the Post period and remained without significant differences in the Current period. On the other hand, the functional β-diversity was similar between the pre and post period, with a significant increase in the current period. The replacement component (turnover) was the one that most influenced the results of taxonomic and functional β-diversity, whereas no significant temporal differences were observed in the loss of species component (nestedness). There was a process of the ichthyofauna heterogenization over the periods, with an increase in taxonomic and functional B-diversity associated with a decrease in richness and abundance. Our study indicates that the ichthyofauna is undergoing a re-structuration process, due to the appearance of tolerant species and the replacement of native and sensible species, which results in function replacement after one decade of operation of the SPPs. This suggests that small-scale enterprises such as PCHs are harmful to the ichthyofauna, due to the changes in habitat, or the appearance of non-native and generalist species. Little is known about the real effects of PCHs on ichthyofauna and our results suggest that it is important to understand these changes, as they can be harmful to ichthyofauna. It is suggested to expand these studies in order to provide a basis for biodiversity conservation measures in environments affected by these projects.

Thesis
1
  • CECÍLIA FERREIRA DE MELLO
  • Ecology and Morphology of Species Groups Of Mosquitoes (Diptera: Culicidae), With Emphasis On The Tribe Mansoniini, In Areas Of Hydroelectric Exploitation In The Amazon, State Of Rondônia — Brazil

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • ANA LAURA CARBAJAL DE LA FUENTE
  • ILDEMAR FERREIRA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • MARTHA CECILIA SUÁREZ MUTIS
  • NATALY ARAÚJO SOUZA
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • ROSEMARY APARECIDA ROQUE
  • Data: Feb 1, 2022


  • Show Abstract
  • The main natural wetlands of the Brazilian Amazon, such as igapos, swamps, meadows,
    mangroves, and floodplains that border the springs and land depressions, provide refuge
    for many animals and plants, thus contributing to increasing local diversity and
    productivity. These environments are characterized by hydrological extremes of
    flooding and drought and are therefore excellent models for ecological studies, as they
    present very different limits and are subject to disturbance processes caused by these
    two periods. In anthropogenic wetlands, on the other hand, disturbance processes are
    caused by different types of human action or intervention. As a result, large lakes are
    formed during the construction of hydroelectric dams, completely altering the
    landscape, eliminating the floodplain, and turning the lotic system into a lentic system,
    which tends to favor floating species of aquatic macrophytes. In aquatic habitats of
    constant nutrient richness, low turbulence, absence of predatory and competing species,
    and also favorable climatic conditions, aquatic macrophytes have the ability to rapidly
    increase their biomass through sexual or asexual reproduction, constituting an excellent
    substrate for so many animals. The Mansoniini tribe is a group of mosquitoes belonging
    to the Culicinae subfamily and closely associated with this type of environment. With
    flat leaves to improve flotation and roots specialized in transporting air, aquatic 

    macrophytes form a microclimate much richer in oxygen and become a real nursery for
    several species of the Mansoniini tribe. The Mansoniini females lay their eggs in
    groups, under the leaves of these plants, mainly grasses. When they hatch, the larvae
    cross the water column and settle in the roots in order to absorb oxygen directly from
    the parenchyma, given that, unlike most mosquitoes, this group does not breathe on the
    water surface, demonstrating one of the main reasons for this skillful relationship.
    Aquatic macrophytes are plants found in all types of water bodies, even at low richness
    or biomass, classified as submerged, emergent, floating leaf, and floating. They are
    fundamental for the metabolism of ecosystems, acting as a substrate for algae,
    sustaining the debris and herbivore chain, therefore, functioning as a nutrient storage
    compartment. Seasonal variations contribute to ecosystems not being static, but
    dynamic and variable, considering that the Amazon region is highly seasonal, with two
    well-defined seasons: a rainy season in the Amazon winter and summer. Therefore, we
    investigated the population dynamics of Culicidae with emphasis on the Mansoniini
    tribe in these two periods, for two consecutive years, measuring the richness, diversity,
    dominance in hydroelectric exploitation areas in the Amazon, state of Rondônia, Brazil.
    The information obtained in this study is presented in the form of five articles on the
    bioecology and morphology of Culicidae with an emphasis on the tribe Mansoniini. The
    temporal distribution of mosquitoes with emphasis on the Mansoniini tribe is addressed
    in the first chapter “Temporal distribution of mosquitoes (Diptera: Culicidae) with
    emphasis on the Mansoniini tribe in the Amazon biome and its interaction with climatic
    factors”. The results of the Canonical Correspondence Analysis showed that the
    maximum temperature variable was significant and had a real influence on the
    distribution of mosquito populations in the study area. At the same time, in the
    relationship between the richness of species in each sample with the accumulated
    rainfall before the start of capture and with the set of evaluated data, geometric
    regression was observed. This represents the data with an adjustment coefficient,
    indicating that there is a positive correlation between the amount of rain accumulated in
    the days preceding the captures and the number of species found. These results indicate
    that the temperature and precipitation concentrated in the two weeks preceding the
    samplings were determinant on mosquito populations and affected the pattern of faunal
    composition. The second chapter the “Assessment of the infestation of Mansonia spp.
    (Diptera: Culicidae) in aquatic plants of the Madeira river basin in lentic and lotic
    environments, Rondônia state, Brazil, evaluated the presence of immature Mansonia
    species in different aquatic plants of the Madeira river basin in 10 lentic and lotic
    environments and correlated abiotic factors such as water pH, dissolved O2,
    conductivity and temperature with the population density of these mosquitoes. These
    correlations showed a sharp increase in the rainy season. Therefore, they were able to
    establish preliminary parameters of how environmental changes influence the ecology
    of this important genus of mosquitoes.These correlations showed a sharp increase in the
    rainy season. Therefore, they were able to establish preliminary parameters of how
    environmental changes influence the ecology of this important genus of mosquitoes.
    The third chapter “Dispersal pattern of Mansonia around the hydroelectric power plant
    area in the Amazon Jirau” presents data on the active dispersal of females of Mansonia 

    spp. around the Jirau hydroelectric power plant, using mark-release-recapture
    techniques. It was observed that the flight behavior of the recaptured specimens was
    summarized with a set of average and maximum distances covered and the dispersion
    movement of Mansonia spp. it is carried out predominantly by random, low and short
    flights, with a tendency to remain close to the breeding sites in certain fragments of
    vegetation. These correlations showed a sharp increase in the rainy season. As a result,
    they were able to establish preliminary parameters of how environmental changes
    influence the ecology of this important mosquito genus. The third chapter “Mansonia
    dispersal model around the area of the hydroelectric power station in Amazonia Jirau”
    presents data on the active dispersal of females of Mansonia spp. around the Jirau
    hydropower plant, using mark-release-recapture techniques. It was observed that the
    flight behavior of recaptured specimens was summarized with a set of mean and
    maximum distances traveled and the dispersal movement of Mansonia spp. is mainly
    carried out by random, low and short flights, with a tendency to stay close to breeding
    sites in certain vegetation fragments. The fourth chapter “Influence of seasonality on the
    morphological variability of wings in populations of Mansonia amazonensis (Theobald)
    (Diptera: Culicidae)” presents results on the analysis of the influence of seasonality on
    the morphological variability of wings in populations of Mansonia amazonensis. The
    results show that the wing size of Ma. amazonensis increases following a relatively
    gradual trend, being smaller during the dry period and larger in the rainy period. In the
    fifth chapter "Ultrastructure of Coquillettidia venezuelensis (Theobald) (Diptera:
    Culicidae) eggs", in order to find differentiable parameters in the exochory of
    Coquillettidia venezuelensis eggs, observations were made using electron microscopy at
    scanning, and it was possible to verify that the basal width of the outer chorionic
    tubercles of Cq. venezuelensis is more similar to the basal width of Cq. juxtamansonia
    eggs than the basal width of the chorionic tubercles of any other Coquillettidia species
    for which the egg has been described.

2
  • ISABELLE DA ROCHA SILVA CORDEIRO
  • Phylogenetic analysis of Hydrometridae Billberg, 1820 (Insecta: Hemiptera: Heteroptera)

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • CRISTIANO FELDENS SCHWERTNER
  • FABIANO STEFANELLO
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • INÊS CORREA GONÇALVES
  • Data: Apr 29, 2022


  • Show Abstract
  • Hemiptera is a monophyletic group of insects whose main synapomorphy is the
    modification of the mandibule and maxilla into concentric piercing-sucking stylets, with
    the labial and maxillary palps being absent. The order gathers four suborders, among
    which only Heteroptera has aquatic representatives. Heteroptera is monophyletic and
    has three main synapomorphies: the scent gland apparatus of the metathorax in adults,
    the dorsal abdominal scent gland apparatus in nymphs, and a strong reduction of the
    tentorium (internal chitinous scaffold of the head). Representatives of the infraorder
    Gerromorpha are known as semiaquatic heteropterans, or true bugs, and occupy a wide
    range of environments, such as humid terrestrial habitats, not necessarily close to water
    bodies, phytotelmata, habitats marginal to freshwater bodies or their surface, coastal
    marine habitats, and even the open ocean. Among the families of Gerromorpha,
    Hydrometridae currently includes three subfamilies (Hydrometrinae, Heterocleptinae e
    Limnobatodinae), with ten extant genera and about 130 species distributed worldwide,
    except for Antarctica, and 11 fossil genera, the oldest of which is dated from the Lower
    Cretaceous. For the present study, a phylogenetic analysis of Hydrometridae was
    performed based on morphological characters. The outgroup was formed by four
    families of Gerromorpha considered closely related to Hydrometridae in previous
    studies, while the ingroup gathered eight of the ten recent genera of the family, in
    addition to two undescribed genera from islands of the Pacific. At total, 110 characters
    (68 binary and 42 multistate) were described and coded, several of which were
    illustrated in order to facilitate their interpretation. The phylogenetic analysis was
    performed through heuristic searches with equal weights using TNT 1.5 no taxon limit
    and by Bayesian Inference using MrBayes 3.2.2. The monophyletism of Hydrometridae
    was not recovered, because Veliometra Andersen, 1977 (Heterocleptinae) was
    recovered as sister-group to Macrovelia hornii Uhler, 1872 (Macroveliidae).
    Hermatobatidae was recovered as the sister-group of Hydrometridae. Hydrometrinae
    was not recovered as monophyletic due to the position of Limnobatodinae as the sister-
    group of (Bacillometra Esaki, 1927 + Hydrometra Latreille, 1797), being closer to them
    than other genera integrating the former subfamily. The subfamily Heterocleptinae,
    including two recent and two fossil genera, is transferred to Macroveliidae. The
    remaining three recent and one fossil genera attributed to Macroveliidae are allocated in
    Macroveliinae. Two new subfamilies are erected to include genera previously allocated
    in Hydrometrinae, Cephalometrinae (type-genus: Cephalometra Polhemus & Ferreira,
    2018) and Chaetometrinae (type-genus: Chaetometra Hungerford, 1950). Considering
    the recent genera, Hydrometrinae now includes only Bacillometra, Hydrometra, and
    Bacillometroides Polhemus & Polhemus, 2010. The fossil genera that remain attributed
    to Hydrometridae are all allocated in Hydrometrinae, some provisionally until they are
    evaluated in a phylogenetic context.

3
  • LIDIANE GOMES DE LIMA
  • DISTRIBUTION PATTERNS OF ICHTHIOPLANKTONIC COMMUNITIES IN TWO ESTUARIAS UNDER THE INFLUENCE OF THE SEMIARID

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • CLAUDIA AKEMI PEREIRA NAMIKI
  • FRANCISCO GERSON ARAUJO
  • JAYME MAGALHAES SANTANGELO
  • JULIANA DOS SANTOS SEVERIANO
  • LUIZ UBIRATAN HEPP
  • MAGDA FERNANDES DE ANDRADE TUBINO
  • RAFAEL DE ALMEIDA TUBINO
  • Data: Aug 31, 2022


  • Show Abstract
  • Understanding the processes that lead to the formation of local communities from the regional pool of species has been one of the main objectives of community ecology. Species that occupy available habitats are filtered through environmental constriants (environmental filters) that select species by segregating niches and favoring speciation and species turnover. In addition, biotic interactions (biotic filters) influence variations in species composition, such as assemblages dominated by species that have competitive advantages. These filters can act on hierarchical scales, partitioning species diversity according to the components α (local diversity), β (variation of diversity between locations) to γ (regional diversity). The present study aimed to: 1) to assess the variation of the ichthyoplankton, the abiotic environment (local and landscape environmental variables) and the availability of food resources; and 2) to analyze the effect of local environmental and landscape variables on the patterns of beta diversity of the local communities of two tropical estuaries with different anthropic pressures: one located in a densely populated urban area, and the other located in an area of environmental protection. The study was carried out in three zones, according to the salinity gradient (upper, intermediate and lower), along the main channel of the estuaries of the Paraíba do Norte and Mamanguape – PB rivers. The results showed that the variables at local scale, as well as the availability of food resources were environmental filters, which were responsible for the formation of the assemblies along both estuaries. In the most impacted estuary (Paraíba do Norte), the influences of the trophic gradient provided by high nutrient concentrations from sewage disposal, agricultural activities and a shrimp farming, in addition to other anthropic impacts, may have resulted in the reduced number of species, low abundance of species and consequently a lower beta diversity, in addition to interfering with their nursery functions for fish species. On the other hand, for the less impacted estuary (Mamanguape), the environmental gradient driven by variations in temperature, transparency and chlorophyll-a, as well as food availability, were responsible for the spawning processes and formation of distinct larval assemblages between the estuarine zones. , which were directed through species substitution, suggesting the importance of environmental heterogeneity for fish diversity in this estuary.

4
  • JHON DARLY CHERO DE LA CRUZ
  • Monogeneans (Platyhelminthes: Monogenea: Diplectanidae, Hexabothriidae, Monocotylidae) parasitic on marine fish from Peru and Brazil

  • Advisor : JOSE LUIS FERNANDO LUQUE ALEJOS
  • COMMITTEE MEMBERS :
  • JOSE LUIS FERNANDO LUQUE ALEJOS
  • RAQUEL DE OLIVEIRA SIMOES
  • CLAUDIA PORTES SANTOS SILVA
  • MARCELO ENRIQUE OLIVA MORENO
  • FABIANO PASCHOAL DE OLIVEIRA
  • Data: Sep 28, 2022


  • Show Abstract
  • The present work aims to study the taxonomy of monogenetic parasites of marine fish
    in Peru and Brasil. Between March 2018 and December 2019, two species of
    elasmobranch fish were collected, Hypanus dipterurus (Jordan and Gilbert, 1880)
    (Dasyatidae) and Pseudobatos planiceps (Garman, 1880) (Rhinobatidae), and five
    species of sciaenids, Cheilotrema fasciatum Tschudi, 1846, Menticirrhus elongatus
    (Günther, 1864), Nebris microps Cuvier, 1830, Pareques lanfeari (Barton, 1947) and
    Stellifer minor (Tschudi, 1846). Host fish were obtained fresh from local fishermen and
    immediately analyzed for the presence of parasites. The monogeneans found were
    analyzed morphologically through light microscopy and some specimens were
    genetically analyzed. In the first chapter, two species of monogeneans of the family
    Monocotylidae, Peruanocotyle chisholmae Chero, Cruces, Sáez and Luque, 2018
    (Dasybatotreminae) and Heterocotyle margaritae Chero, Cruces, Sáez, Santos and
    Luque, 2020 (Heterocotylinae), were described from specimens collected from the gills
    of H. dipterurus based on morphological data. In addition, a new species of
    Loimopapillosum Hargis, 1955 was described also parasitizing the gills of H. dipterurus
    based on morphological and molecular data. The phylogenetic position of the new
    species of Loimopapillosum was investigated based on the partial sequences of 18S and
    28S rDNA genes and sequences of others monogeneans obtained from GenBank. As a
    result of this analysis, the Family Loimoidae Price, 1936 is rejected and included as a
    subfamily in the Monocotylidae. Loimopapillosum pascuali Chero, Cruces, Sáez,
    Oliveira, Santos &amp; Luque, 2021 represents the first species of this genus in South
    America. In the second chapter, two monogeneans species of the family Hexabothriidae
    Price, 1942 were found in the gills of two species of elasmobranch fish. The first
    species, Hypanocotyle bullardi Chero, Cruces, Sáez, Camargo, Santos and Luque, 2018,
    was described from H. dipterurus and the second species Rhinobatonchocotyle pacifica
    Oliva &amp; Luque, 1995 was found from P. planiceps and a redescription is provided. For
    both species of Hexabothriidae the sequences of the 18S and 28S rDNA genes were
    provided. In the third chapter, a new genus from the family Diplectanidae Monticelli,
    1903 is proposed and eight new species are described from the gills of sciaenid fish.

5
  • THATIANA LUIZA ASSIS DE BRITO CARVALHO
  • Use of fish as bioindicators of environmental impacts in the Bays of Paraty and Sepetiba, RJ: Histological biomarkers

  • Advisor : APARECIDA ALVES DO NASCIMENTO
  • COMMITTEE MEMBERS :
  • APARECIDA ALVES DO NASCIMENTO
  • LEILANE MARIA BARCELLOS NEPOMUCENO
  • MARCOS ANTONIO JOSE DOS SANTOS
  • VIVIAN DE ASSUNCAO NOGUEIRA CARVALHO
  • CLARICE MACHADO DOS SANTOS
  • ANA LUIZA BASTOS
  • BERNADETE MARIA DE SOUSA
  • Data: Dec 23, 2022


  • Show Abstract
  • Sepetiba Bay has been suffering heavily from anthropogenic activities, while Paraty
    Bay even with the presence of contamination sources does not seem to suffer major
    environmental effects. The use of bioindicators can be considered an important tool for
    environmental monitoring in aquatic ecosystems, in which the use of fish is efficient.
    Histology is considered a biomarker and can be used as an effective instrument to
    analyze the effects of pollutants and other stressors on fish. The gills, hepatopancreas
    and kidneys are target organs for the action of pollutants in the aquatic environment and
    can manifest at various levels of biological organization, including structural changes.
    In this sense, histological changes were analyzed in the gills, kidneys and
    hepatopancreas, in order to evaluate the use of the fish Menticirrhus americanus
    (Linnaeus, 1758) and Micropogonias furnieri (Desmarest, 1823) as bioindicators of the
    environmental quality of the Bays of Paraty and Sepetiba, located in the state of Rio de
    Janeiro. For the accomplishment of the present study a total of 75 fishes were collected
    from the Bays of Paraty and Sepetiba. In the species collected in the Bay of Paraty the
    lesions commonly found were leukocyte infiltration, vasodilation and lamellar blood
    congestion in gills; cellular hypertrophy, dilation of the tubular lumen, and tubular
    regeneration in kidney; nuclear hypertrophy, irregular shaped nucleus, nuclear
    lateralization in hepatopancreas. Stage III changes are the most important because they
    are irreversible. In addition, the gills were considered the most appropriate organ for
    analysis of environmental impacts, considering that the percentages of the lesions
    analyzed indicate that the gill tissue suffered the highest occurrence of histological
    alterations of stage III in Sepetiba Bay. Therefore, the percentages of the same stage
    changes found in the hepatopancreas and kidneys, are inferior when compared to those
    of the gills. Thus, histological biomarkers can be used as a low cost tool as a
    bioindicator of the environmental impacts by determining the health of Menticirrhus
    americanus and Micropogonias furnieri, from the family of the cyanides.

2021
Dissertations
1
  • RICARDINO DA CONCEIÇÃO NETO
  • Patterns of co-occurrence of species of soil ants in reforestation of small-scale Atlantic Forest

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • ANDRE FELIPPE NUNES DE FREITAS
  • ANDRÉ BARBOSA VARGAS
  • JARBAS MARCAL DE QUEIROZ
  • RODOLFO CESAR REAL DE ABREU
  • RODRIGO DOS SANTOS MACHADO FEITOSA
  • Data: Feb 12, 2021


  • Show Abstract
  • The use of null models in analyzes of co-occurrence patterns has become a viable alternative
    to study the rules that govern the assembly of communities. Local communities are formed
    from the regional species pool under the influence of several factors. Our study investigated
    some factors that may influence the formation of local ground-dwelling ant community using
    presence/absence matrices obtained from a planted forest in southeastern Brazil. We analyzed
    occurrence patterns of 52 ant species according to ant guilds, habitat types, sampling time,
    and randomization algorithms. The random pattern of species distribution predominated in the
    community, making up 70% of the results, followed by segregation, with 21.7%, and
    aggregation pattern, with 8.3% of the results. Non-random co-occurrence patterns were more
    frequent for omnivorous ants, heterogeneous habitats, dry period, and fixed-fixed
    randomization algorithm. The frequencies of aggregation and segregation were almost the
    same between ant guilds, with segregation patterns prevailing in all cases. Heterogeneous
    habitat matrices showed much more segregation than aggregation of species pairs, whereas
    the results for the homogeneous habitat matrices were dependent upon tree species. Regarding
    the sampling time, we found only segregation in the rainy, whereas in dry period, aggregation
    and segregation patterns occurred with small differences in frequencies. Aggregation species
    co-occurrence patterns of ants were never found in fixed-fixed algorithm. Our results showed
    the importance of analyzing several factors when using species co-occurrence patterns to
    understand the formation of local communities. Although ant community demonstrates in
    most cases a random structure in the distribution of species pairs, even working in a small
    spatial scale, we found evidence in favor of the tree specialization hypothesis, suggesting the
    importance of using different tree species in restoration projects to recover the diversity of ant
    species.


2
  • KAREN DOS SANTOS TOLEDO
  • Morphological variation of the brachial plexus in four species of phyllostomid bats (Chiroptera, Phyllostomidae)

  • Advisor : ADRIANO LUCIO PERACCHI
  • COMMITTEE MEMBERS :
  • ADRIANO LUCIO PERACCHI
  • ADRIANA VENTURA
  • ÉRIKA RENATA BRANCO
  • NATHÁLIA SIQUEIRA VERÍSSIMO LOUZADA
  • DANIELA DIAS
  • Data: May 28, 2021


  • Show Abstract
  • Despite the remarkable morphological modifications that occurred in the
    thoracic limbs of bats, information about the brachial plexus in this group is still scarce.
    This study aimed to describe the origin, composition, and distribution of these
    peripherical nerves in four species of Phyllostomidae. Both antimers of six Artibeus
    lituratus, five Desmodus rotundus, seven Glossophaga soricina, and five Phyllostomus
    hastatus—all males, adults, and from the Adriano Lúcio Peracchi Collection (UFRRJ)—
    were dissected. After complete exposure of the structure, I found that the brachial plexus
    of D. rotundus and P. hastatus are formed by the same roots (C5 – T1), while the fourth
    cervical spinal nerve and the second thoracic spinal nerve are present in G. soricina (C4
    – T1) and A. lituratus (C5 – T2), respectively. There was intraspecific variation e
    asymmetry both in the origin of the structure and in the combinations of the nerve
    segments for forming the terminal branches. Still, the distribution to the target muscles
    and patagium was more conserved. Data presented here support the presence of two
    distribution patterns of the nerves to the muscles in Chiroptera, and the innervation of the
    membranes seems to be explained by embryogenesis. Although the phyllostomid bats
    brachial plexus is similar to that of other terrestrial Laurasiatheria, aspects identified in
    these bats and apparently unique to Chiroptera, may be related to anatomical changes in
    the thoracic limbs functionally liked to flight.

3
  • FERNANDA SILVA DE AGUIAR DO PRADO
  • Fish, benthic invertebrates and environmental variables associations in a lagoon system of Rio de Janeiro State

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • GUSTAVO MATTOS SILVA DE SOUZA
  • ELLEN MARTINS CAMARA
  • FRANCISCO GERSON ARAUJO
  • MAGDA FERNANDES DE ANDRADE TUBINO
  • Data: Aug 11, 2021


  • Show Abstract
  • Coastal lagoons are shallow water bodies separated from the sea by any type of barrier or with limited connection with the marine environment through natural or man-made channels. Due to the high productivity, these ecosystems shelter distinct communities as fish and benthic invertebrates, which shows high economic and ecological value. The aim of this work was to evaluate the variation in the structure of the ichthyofauna and benthic invertebrates over environmental gradients during dry and rainy seasons, in addiction to assess eventual association between both biotic groups in the Maricá Lagoon System, located at Maricá city, Rio de Janeiro State. The tested hypothesis  is that environmental variables determine the fish and benthic invertebrates’ distribution and that these variables are s influenced by the distance from the sea connection, and that these two communities present significant association Three zones were established  to the sampling program according to the distance from the sea connection: Inner Zone (IZ, more distant from the sea conection), Middle Zone (MZ) and Outer Zone (OZ, closer to the connection with the sea ). The collection of biotic material and the environmental variables measurements occurred in July 2018 (dry season) and January 2019 (rainny season). The fish community structure differed significantly among zones, seasons and was significant for the interaction between these two factors (p < 0.05). Higher fish abundance was found in IZ and lower in OZ. Atherinella brasiliensis and Anchoa januaria were the species with most contribution in all zones and seasons. Temperature and salinity were the variables that presented the greatest independent explanatory power among the predictors of species richness (49.29 % and 18.29%, respectively) of the fish community, showing negative and positive correlations, respectively. The benthic invertebrates were significantly different among all studied factors. The greatest abundance was found on IZ and the lowest on OZ. Nereididae were the polychaetes family with most contribution on dry season and on inner and middle zones. Oligochaeta was the invertebrate group that most contributed on rainy season. Capitelidae presented most contribution on OZ. Concerning the benthic invertebrates, salinity and temperature were the variables with greatest independent explanatory power (40.47% and 18.85%, respectively). Contrarily to fishes, salinity showed significantly negative correlation and temperature showed positive correlation with benthic invertebrate. The correlation between these two groups was significative but low, even after the environmental variables control. Fish and benthic invertebrates that share the Maricá Lagoon System are submitted to similar environmental conditioning, that seem to act in different way for each group. Most of the explained variation of the fish community was associated with effects shared by environmental variables and by the spatial-zone structure (16%), and a negligible fraction was explained exclusively by invertebrates (1%). Considering benthic invertebrates, larger fractions (18%) were associated with the effects shared by the three factors (fish, environmental variables and zones), in addition to a significant additional explanation being shared by environmental variables and zone (10%) and by the exclusive explanation of environmental variables (13%).Understand the way that each taxonomic group responds to environmental variables and the spatial structure simultaneously could be an important tool to help decision-making related to the conservation of aquatic ecosystem in different scales.

4
  • RAYANE FERREIRA DIAS
  • Development and intrapuparial characterization of Peckia (Euboettcheria) collusor (Curran and Walley, 1934) (Diptera: Sarcophagidae), under different temperatures, with application in forensic entomology

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • ILDEMAR FERREIRA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • NATALY ARAÚJO SOUZA
  • PALOMA MARTINS MENDONÇA
  • SIMONE PATRICIA CARNEIRO DE FREITAS
  • Data: Nov 30, 2021


  • Show Abstract
  • The Sarcophagidae family has approximately more than 3,000 species, recording great diversity in Brazil, flies strongly associated with medical, veterinary, sanitary, ecological and entomological studies due to their life habits. However, in forensic entomology, the sarcophagus family is still little used for studies, despite being strongly registered in carcasses and even in human cadavers. Therefore, this study aims to identify and compare the stages of development and intrapupariform morphological characteristics to serve as an auxiliary tool in forensic entomology. Pupae collected after the zero mark were killed at intervals of 3 in 3 hours until completing the first 24 hours and after 6 in 6 hours until the emergence of the first adults, for each time 30 pupae were used, totaling 1560 for 27ºC and 1290 for 32 ° C. The time of intrapupal development of Peckia (Euboettcheria)collusor under controlled laboratory conditions was 288 hours at 27 ° C and 228 hours at 32 ° C. The 2,850 pupae were identified according to the worked temperature, being classified into eight stages of possible: puparia; prepupae; anterior and posterior cryptocephalic pupa; phanerocephalic pupa; pupa-adult apolysis; adult farate and imago, in addition to obtaining 16 key morphological characters to identify the age of the pupae. The intrapupariform morphological characteristics obtained have great potential to estimate the minimum Postmortem Interval (minPMI) through the work of researchers, specialists, technical assistants or forensic entomologists.

Thesis
1
  • CARLOS ALBERTO DOS SANTOS SOUZA
  • Ecology and behavior of the digger wasp Sphex ingens Smith 1856 (Hymenoptera, Sphecidae): subsidies for the species conservation in Brazil

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • JARBAS MARCAL DE QUEIROZ
  • FÁBIO PREZOTO
  • ROGÉRIO SILVESTRE
  • RODRIGO ARANDA
  • MAURO SÉRGIO CRUZ SOUZA LIMA
  • Data: Jun 11, 2021


  • Show Abstract
  • In recent years, despite the many advances achieved through research on insect conservation,
    the worsening decline in populations of countless species has worried scientists and cast doubt
    on the effectiveness of government policies and actions aimed at species conservation,
    especially when more than ¾ of the insect richness cataloged is still totally unknown as to the
    roles played in the functioning or maintenance of the stability of natural ecosystems.
    Sphex
    ingens
    Smith, 1856 is one of 147 species of Sphecidae with confirmed occurrence for some
    areas of the Neotropical Region, and there has never been an effort to clarify basic questions of
    its natural history, such as predatory behavior, dispersive capacity and the influence of
    environmental variables on the selection of habitats, and distribution. Therefore, this study
    aimed at assessing the ecology and behavior of the digger wasp
    S. ingens in order to propose
    actions for the conservation of the species in Brazil and to direct future research. The specific
    objectives focused on: (1) to evaluate the predation ecology of
    S. ingens through the predatorprey relationships, and the behaviors related to the prey-carrying mechanism; (2) to analyze the
    extent of the flight capacity of
    S. ingens; (3) to investigate which variables in the physical
    structure of the habitat are predictors in the models of the habitat selection; and (4) to model
    the potential geographic distribution of
    S. ingens in South America, considering the influence
    of climatic and elevation variables, in addition to assessing the degree of protection offered by
    the Brazilian conservation units on the areas where the species is likely to occur. The ecology
    and predatory behavior of
    S. ingens were recorded in the field during expeditions to three
    locations in the municipality of Angra dos Reis-RJ. Moreover, 235 individuals were capturedmarked-released to measure flight capacity at distances tests. The predictions for habitat
    selection were modeled after the inclusion of 15 variables of the habitat structure and their
    relationship with three landscape sizes in 93 areas visited on the continent and Ilha Grande (RJ);
    and records obtained in the field, in indexed databases, specialized works, and in entomological
    collections were used to model the potential distribution of the species according to the
    environmental variables and to estimate the protection received by the populations in
    conservation unit. The analysis of predatory behavior confirmed a high predisposition to
    specialization in capturing two species of Pseudophylinae katydids,
    Meroncidius spp. and Pleminia vicina (Orthoptera, Tettigoniidae), which is probably an important mortality factor for
    these prey populations. Besides, female tree climbing behavior can be an important strategy for
    reducing bird kleptoparasitism during nest supply and/or energy savings during prey transport.
    Flight ability tests, identify that the species can fly long distances (
    e.g., 4,5 km or 63.5 km2
    flight area). The models of habitat selection predicted that in small landscapes (3.5 km2), the
    size of the nesting areas and the non-waterproofed surface significantly influence the choice of
    the species for areas that will serve as nesting sites, while the presence of watercourses and the
    anthropic environment are the main predictive variables in landscapes with 63.5 km
    2. Along
    the analyzed stretch of Angra dos Reis,
    S. ingens showed an aggregated distribution pattern and
    restricted to certain habitats. In Brazil, more precisely the Atlantic Forest, concentrates 96.4%
    of the habitats suitable for
    S. ingens (i.e., 50,845.5 km2) in relation to the whole of South
    America. However, in the case of Brazil, only 20.2% of the areas where the species is likely to
    occur are officially protected by conservation units. In general, the ecological and behavioral
    patterns found for
    S. ingens were consistent and elucidated some questions about the natural
    history of the species, although it does not exclude the need for further research to consolidate
    bioecological information relevant to the management of its populations and habitats. Certainly,
    the information gathered reinforces that the species requires an urgent priority assessment in
    terms of conservation threat status. Also, the inclusion of
    S. ingens in the list of threatened
    species would be of great strategic value for short-term conservation in terms of preventive
    protection, while understanding other aspects of natural history requires more details.


2
  • LUIS FERNANDO MENEZES JUNIOR
  • Bat (Mammalia, Chiroptera) Community of the Private Natural Heritage Reserve (CPNHR) Bom Retiro, Silva Jardim, RJ, Brazil

  • Advisor : ADRIANO LUCIO PERACCHI
  • COMMITTEE MEMBERS :
  • ILDEMAR FERREIRA
  • MARCELO RODRIGUES NOGUEIRA
  • ISAAC PASSOS DE LIMA
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • LUIZ ANTONIO COSTA GOMES
  • Data: Jun 25, 2021


  • Show Abstract
  • From January 2011 to June 2018, a survey of the chiropteran fauna of the Private
    Natural Heritage Reserve Bom Retiro, Silva Jardim, Rio de Janeiro, was carried out. For
    this, the use of mist nets was used to capture bats in five collection sites. In 19
    campaigns, 540 specimens of bats distributed in four families were captured,
    Phyllostomidae, Vespertilionidae, Noctilionidae and Molossidae and 19 species.
    Carollia perspicillata was the most captured species, representing 45.75% of the
    catches, possibly justified by the large presence of plants of the Piperacea family.
    Compared to seven other surveys conducted in the state of Rio de Janeiro, CPNHR Bom
    Retiro showed low diversity, but the collector curve has not stabilized yet, and with the
    increase of more campaigns have more species added. In the comparison of two areas,
    one Forested and one Open, the first presented greater diversity, a fact that can be
    explained by the greater availability of refuges and food in this area. Four bat species
    presented streblídeos fly infestation, C. perspicillata was parasitized by eight fly
    species, while Platyrrhinus lineatus had presents two and Noctili leporinus and Sturnira
    lilium presented just one each, such results corroborate with other surveys carried out in
    São Paulo, Minas Gerais and Paraná, closer states that differ from distant states such as
    Maranhão and the Federal District, which seems to be preponderant factor. The
    presence of the species Dermanura cinerea is an important fact, as it is classified as
    vulnerable and is included in the List of Brazilian Endangered Animals. The CPNHR
    Bom Retiro bat community, despite the great dominance of some bat species, is an
    important set of this biota, reinforcing that the continuous study is essential to know it
    better.

3
  • CARLOS AUGUSTO DOS SANTOS SOUSA
  • Comparative morphology of the penis of Cerdocyon thous (Linnaeus, 1766) and Lycalopex gymnocercus (G. Fischer, 1814)

  • Advisor : MARCELO ABIDU FIGUEIREDO
  • COMMITTEE MEMBERS :
  • ANDRÉ RODRIGUES BARRETO DA CUNHA VIANNA
  • LEILANE MARIA BARCELLOS NEPOMUCENO
  • MARCELO ABIDU FIGUEIREDO
  • MAURICIO ALVES CHAGAS
  • PAULO DE SOUZA JUNIOR
  • ROGÉRIO MAGNO DO VALE BARROSO
  • YURI KARACCAS DE CARVALHO
  • Data: Aug 9, 2021


  • Show Abstract
  • Although canids are from a very heterogeneous family, they can be commonly separated into two distinct types: the dogs, wolves and jackals and the foxes and graxains. As important species in the modulation of the structuration of biological communities, they are frequently found in breeders and zoos. The aim of this study was to characterize the morphology of the penis of C. thous and L. gymnocercus in order to provide information that can help the reproductive management in captivity and favor the clinical conduct involving this organ as well as to contribute to comparative animal morphology. For this, fourteen cadavers, males and adults (seven C. thous and seven L. gymnocercus) were used. After the animals were placed in the right lateral decubitus position, and their chest wall was dissected to access to the thoracic aorta, which was properly cannulated for fixation with a 10% formaldehyde solution. Afterwards, the animals were dissected and anatomical regions, as well as the static structures of the penis of both species, were registered and identified. For the macroscopic characterization, two penises from each animal were cut at different regions for examination under a stereoscopic microscope: a sagittal and a transverse section. The remaining ten penises from cleaved region of the penis body (5 of each species) were subjected to routine histological technique for embedding in paraffin. From each sample, 5 slices with 5 micrometers of thickness each fragment were used and stained with hematoxylin-eosin, Mallory’s trichrome, Orcein and Picrosirius red method. The smooth muscle cells were ideitify by immunohistochemistry using anti-alpha-actin antibody. The results revealed that pênis of both species possess a fibroelastic histoarchitecture in contrast to described in the current literature for carnivores. As the anatomical regions of the penises, root, body and glans were identified. Penile areas (total penile area, corpus cavernosum area, corpus spongiosum area and luminal area of the urethra) were measured. The luminal area of the urethra of C. thous and L. gymnocercus measured 0.089 ± 0.048, and 0.095 ± 0.037, respectively (P = 0.8177). Total area of the penis in C. thous was 26.981 ± 4.842 while in L. gymnocercus was 20.228 ± 5.245 (P = 0.0673). In addition, the corpus cavernosum area of C. thous was significantly larger (9.929 ± 2.607) than that of L. gymnocercus (6.083 ± 1.048) (P = 0.0156). The corpus spongiosum area of L. gymnocercus was significantly larger (2.068 ± 0.424) when compared to C. thous (1.520 ± 0.188) (P = 0.0297). The histochemical and immunohistochemical results revealed a fibroelastic histoarchitecture, in contrast to descritions observed in the current literature for carnivores Thus, this research can contribute to the understanding of the reproductive behavior of these carnivores, in addition to helping to improve the management of animals in captivity, as well as contributing to improve clinical conduct in supporting the diagnosis of penile diseases

4
  • MARIANA DE SOUZA OLIVEIRA
  • Taxonomy and ecology of coccidians: Isospora spp. and Eimeria spp. of wild birds from Brazil and Portugal

  • Advisor : BRUNO PEREIRA BERTO
  • COMMITTEE MEMBERS :
  • BRUNO PEREIRA BERTO
  • ILDEMAR FERREIRA
  • VIVIANE MOREIRA DE LIMA
  • AGUIDA APARECIDA DE OLIVEIRA
  • HERMES RIBEIRO LUZ
  • LÚCIO ANDRÉ VIANA DIAS
  • SERGIAN VIANNA CARDOZO
  • Data: Sep 15, 2021


  • Show Abstract
  • Brazil is among the most biodiverse countries in the world, and this biodiversity is
    evaluated by the size of its territory, transformed, a large amount of endemic species, making it
    important for investments in bird conservation. Birds are animals of great ecological importance,
    essential for the maintenance of balance, acting as seed dispersers, pollinating agents, prey
    regulators and, most importantly, being conservation bioindicators, as they are animals known
    for their sensitivity to changes in habitats. The main factors related to the extinction of wild
    species are the degradation of natural environments, introduction of exotic species, caused by
    overexploitation by humans, impacting not only the fauna, but also the flora and microbiota, 

    and indirectly favoring the appearance and transmission of parasitic diseases. Parasites can play
    a major role in maintaining this biodiversity, through the maintenance of diversities in ecological
    communities, thus acting as key-species for this purpose. However, they can also cause decline
    in natural populations, decreasing so much the level of reproduction of their hosts. Among the
    different types of parasites, coccidia in birds stand out, they are predominantly intestinal
    intracellular protozoa, revealing fundamental importance, especially in anthropogenic
    environments, as birds stressed by human impacts tend to be more susceptible to infection and
    colonization of coccidia. Thus, coccidia play the role of biomarkers of environmental impacts.
    Coccidia fit into a diverse and complex group of parasites, highlighting the genera of Isospora
    Schneider, 1881 e Eimeria Schneider, 1875, which are of greater relevance for parasites of birds
    of the Passeriformes and Columbiformes orders. In this context, the objective was to analyze
    feces of wild birds captured in areas of the Atlantic Forest, Parque Nacional do Itatiaia, Parque
    Nacional da Serra dos Órgãos, preservation and reforestation area of the Instituto Federal de
    Pinheiral and in the District of Cacaria, Rio de Janeiro, in addition to the feces presented from
    Portugal, to identify and quantify coccidian parasites present. After the morphological analysis
    of the found oocysts, molecular analyzes were settled in the viable ones, working on DNA
    sequence analysis of COI and 18S genes, in addition to phylogenetic analysis. As a result we
    obtained five articles, three articles with records of new species, one Isospora sp. and two
    Eimeria spp., a redescription article of an Isospora sp. with new hosts, and an article with
    redescription of an Eimeria sp. in birds from Portugal.

5
  • RAYANE SORRENTINO RIBEIRO
  • Contamination of litter, microplastic and chemicals in the marine environment

  • Advisor : ANDRÉ RESENDE DE SENNA
  • COMMITTEE MEMBERS :
  • HELIO RICARDO DA SILVA
  • LEONARDO MITRANO NEVES
  • FABIO VIEIRA DE ARAUJO
  • MELANIE LOPES DA SILVA
  • ANDRÉ RESENDE DE SENNA
  • Data: Oct 27, 2021


  • Show Abstract
  • Each year, the impacts caused by human activities on the environment increase.
    Human activities cause disturbances due to the intense manufacture and consumption of
    synthetic products, chemical compounds, mining, and environmental accidents involving 

    pollutants. Nevertheless, inadequate solid waste management, demographic, industrial and
    tourist growth, inadequate public sanitation policies, result in favourable scenarios for
    environmental contamination, especially in marine environments. Coastal areas have dense
    population density, marinas, ports, sewage channels and intense tourist activity, which
    aggravates contamination by macro, micro litter and chemical compounds. These contaminants
    interact with the biota, where different groups of organisms are physiologically impacted.
    About this topic, there are diverse methodologies applied to litter and microplastics (MPs)
    studies. Regarding litter, many methodologies used in studies are biased, consequently the
    analyses and results are imprecise. As a result, Chapter I approaches methodological concepts
    usually used to ecological works, in the analysis of litter collected in Sydney Harbour.
    Simulations of different sizes and numbers of sampling units (transects or quadracts) were
    performed and the impact of these units on sample precision was calculated. It is noticed that
    the choice and definition of sampling design directly reflects on the precision of the litter
    sampling. This is a baseline for future studies on the subject and the consequent production of
    more precise studies and analyses, not only applicable to litter. Still on methods, Chapter II
    reviews and describes methodologies applied to the study of microplastics in crustaceans. This
    review included all papers about MP in crustaceans published up to March 2021. In addition
    to description of methods, this work supports studies involving MPs in invertebrates, since it
    presents criticisms and limitations about methods used so far. Finally, as a case study, Chapter
    III analyses the contamination of MPs in different benthic organisms of the coast of Rio de
    Janeiro. Contamination was analysed in natural substrate, algae, sponges, and sea squirts,
    concomitantly related to MP ingestion by epibiont amphipods. Macroalgae are more
    contaminated by MP, as well as their associated organisms. Sponges and ascidians have
    different filtering process that influence the accumulation of MP in tissue, as well as its
    availability to associated organisms. MPs are considered ecosystem compounds and these
    results report the transference of this contamination in different benthic ecological levels and
    in sites not previously analysed.

6
  • AMANDA QUEIROZ BASTOS
  • Bionomy of culicidae and natural investigation for flavivirus in a landscape of the Atlantic Forest biome in the state of Rio de Janeiro, Brazil

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • HÉLCIO REINALDO GIL-SANTANA
  • GERSON AZULIM MÜLLER
  • ILDEMAR FERREIRA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • JULIA DOS SANTOS SILVA
  • NATALY ARAÚJO SOUZA
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • Data: Oct 29, 2021


  • Show Abstract
  • The mosquitoes, family Culicidae, have 3,568 species classified in two subfamilies:
    Anophelinae and Culicinae. Both have species of epidemiological importance. The fauna
    inventory of mosquitoes in areas of natural environment is condiderably important in ecological
    studies. The natural populations of animals in a given biogeographic area distributed in
    communities subject to constant fluctuations in response to the environment. During the
    processes of anthropic action or in the possible periods of recovery of the vegetation cover,
    knowledge of the biodiversity of mosquito communities in na Atlantic Forest environment is of
    relevant importance. Since this knowledge is useful to evaluate possible changes in behavior
    and adaptations in the pattern of activities of mosquitoes considered to be, until then, of wild
    habit, preferably. The sampling resulted from collections made in two fragments of Atlantic
    Forest in the state of Rio de Janeiro in municipality of Nova Iguaçu in the Associação de
    Taifeiros da Armada (ATA) and in Boa Esperança site. The duration of collections in both
    locations was one year.The present study aimed to assess the richness, diversity, equitability and
    preference of immatures and adults in both fragments and the influence of climatic factors
    (temperature, relative humidity and rainfall) on the abundance of mosquitoes. In the two study
    areas, biweekly visits, sytematic and standardized sampling were performed using a manual
    sucker to collect the larvae. In ATA, the natural breeding sites surveyed were bamboo stalks,
    while in the Boa Esperança site, ovitraps were randomly distributed and the natural bamboo and
    bromeliad breeding sites were monitored. Adult spcimens were captured using CDC light traps
    with CO2 attractiveness, part of the specimens from the collected eggs were used to perform the
    analysis of possible natural infection by flavivirus (Zika, yellow fever). During the sampling
    period in the ATA, 3170 larvae were collected in perforated bamboo in eight stems of Five
    plants, of which 688 specimens reached the adult stage, distributed in 10 genera and 19 species.
    The richness of the immatures collected in the ATA was 20 species, with a recorded diversity of
    1.817 and Shannon’s equitability of 0. 6064. In the sample area of the Boa Esperança site, 5514
    larvae were collected and 1322 reached the adult stage: 949 in the plastic container, 80 in the
    bromeliad and 293 in the bamboo. Of the 5868 eggs collected, 3991 hatched, and 3807 reached
    the pupal stage and 2420 reached the adult stage. The species from the eggs with the greatest
    abundance were Aedes albopictus with 61% and Haemagogus leucocelaenus 34%. In the CDC
    light trap with CO2 attractiveness, 2621 specimens of mosquitoes of these genera were: Culex
    (84,9%), Wyeomyia (5,3%), Aedes (3,5%) and Limatus (3,1%). A total of 1,229 specimens of
    mosquitoes: Ae. albopictus (651), Hg. leucocelaenus (565) and Hg. janthinomys (13) from eggs
    collected at the Boa Esperança site were submitted to RT-PCR to detect flavivírus. The bamboo
    breeding area showed the greatest diversity and fairness, however, the plastic container had the
    lowest indexes. Regarding the richness of the immatures found, it was showed greater richness
    in the bamboo. The adults captured at sample point 5 of the Boa Esperança site had the highest
    levels of diversity, equatability and richness. Evidence was found through the polymerase chain
    reaction (RT-PCR), partial sequences of Zika vírus in sample of Hg. leucocelaenus, an
    important species from the epidemiological point of view in the transmission of the yellow fever
    vírus.

7
  • RAFAELA DE SOUSA GOMES GONÇALVES
  • Spatial and temporal assessment of the ichthyofauna and their environmental relationships

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • ANDRÉ LUIZ MACHADO PESSANHA
  • ELLEN MARTINS CAMARA
  • FRANCISCO GERSON ARAUJO
  • FÁBIO LAMEIRO
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • MIRIAM PILZ ALBRECHT
  • TAYNARA PONTES FRANCO
  • Data: Dec 15, 2021


  • Show Abstract
  • Shallow water estuarine environments have many habitats that favor colonization and
    use by different fish species. These coastal ecosystems are undergoing increasingly
    impacts resulting from industrial and urban developments in their surroundings,
    resulting in a growing loss of biodiversity, which may be accompanied by the losses of
    important ecological functions. Investigating the patterns and processes that act on
    biodiversity is essential to obtain a more view of the dynamics and roles of communities
    in the ecosystems, and for this, short and long-term studies are essential. Studies have
    mainly addressed the taxonomic structure, requiring a more integrated approach, aiming
    to understand the dynamics and roles of functional groups in space and time. The
    present study, divided into two chapters, aims to understand the spatiotemporal
    dynamics of the ichthyofauna of shallow areas in a tropical bay in a growing process of
    environmental change, exploring taxonomic and functional aspects. In chapter 1, we
    seek to describe the relationship between beta diversity and environmental
    heterogeneity, in order to test the hypothesis that environmental heterogeneity
    influences biodiversity. A weak positive relationship between environmental
    heterogeneity and beta diversity was detected, suggesting that more heterogeneous
    environments tend to have greater variations in biological composition. In Chapter 2,
    we assess temporal changes (1983-1985, 1999-2001, and 2017-2019) in taxonomic and
    functional indices. Previous studies have already reported a decline in the fish richness
    in the shallow areas of Sepetiba Bay, but the investigation of how the functional groups
    have been affected has not yet been investigated. We tested the hypothesis that
    functional diversity indices also changed over time, as a result of environmental
    changes in the recent decades. We found a substantial decrease in species richness and
    abundance in more recent periods compared to 1983-1985. However, the functional
    structure remained relatively stable, with the exception of functional richness, which
    showed a significant decrease, indicating an impact on the amount of functional space
    occupied by the local community, so that some of the resources potentially available to
    the community were no longer used. The stability observed in the functional descriptors
    can be explained by the fact that estuarine environments tend to have high functional
    redundancy due to the restrictions imposed by the marked environmental gradient,
    which can result in the convergence of functional traits between species, ensuring that,
    despite losses in richness and abundance of species, the main functions can be
    maintained. The information obtained in this study confirms that the use of functional
    indices is essential to complement taxonomic assessments, giving a detailed view of the
    extent of biodiversity loss in impacted environments.

2020
Dissertations
1
  • JHON LENNON GENOVEZ DE OLIVEIRA
  • Taxonomy and ecology of coccidians of wild birds from Southeastern Brazil: Molecular identification of Isospora spp.
    (Apicomplexa: Eimeriidae) in the Itatiaia National Park, RJ

  • Advisor : BRUNO PEREIRA BERTO
  • COMMITTEE MEMBERS :
  • BRUNO PEREIRA BERTO
  • CARLOS WILSON GOMES LOPES
  • SERGIAN VIANNA CARDOZO
  • SERGIO THODE FILHO
  • VIVIANE MOREIRA DE LIMA
  • Data: Feb 13, 2020


  • Show Abstract
  • Coccidia (Apicomplexa: Eucoccidiorida) are protozoan parasites frequently observed in
    wild birds, which are extremely important for biodiversity, host specificity and
    conservation. This study aimed to identify, morphologically and molecularly,
    coccidians of wild birds captured in Itatiaia National Park, which is a protected area in
    the interior of State of Rio de Janeiro. Seventy-six members from two different families
    were captured and identified. Two species of coccidians were identified: Isospora
    sepetibensis Berto, Flausino, Luz, Ferreira, Lopes, 2008 of the new host Trichothraupis
    melanops (Vieillot, 1818) (Passeriformes: Thraupidae) and Isospora massardi Lopes,
    Berto, Luz, Galvao, Ferreira, Lopes, 2014 from new hosts Turdus spp. (Vieillot, 1818)
    (Passeriformes: Turdidae). The oocysts of these species were morphologically similar to
    the original descriptions; however, for I. massardi, the oocysts exhibited different size
    patterns associated with each host Turdus spp. Molecular analysis was performed by the
    mitochondrial cytochrome c oxidase subunit 1 (COI) gene and by the 18S small subunit
    ribosomal RNA (18S) gene. Isospora sepetibensis is the first coccidian parasite of a
    New World thraupid to have a molecular identification of the COI gene. Isospora
    massardi exhibited a genetic difference of 3% in COI sequences between Turdus spp.,
    which substantiated an ecological discussion that associates morphometric and
    genotypic differences with a parasite-host co-specification process.

2
  • LETICIA NERY ALVES SANT'ANA
  • Diversity and distribution of semi-aquatic bugs (Insecta: Heteroptera: Gerromorpha) from Alagoas and Sergipe, northeastern Brazil

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • ALINY PATRICIA FLAUZINO PIRES
  • JULIANNA FREIRES BARBOSA
  • LEANDRO LOURENCO DUMAS
  • TATIANA NASCIMENTO DOCILE
  • Data: Feb 18, 2020


  • Show Abstract
  •  

    The Brazilian fauna of semi-aquatic bugs (Insecta: Heteroptera: Gerromorpha)
    is poorly known in most of the national territory, with sampling and studies
    concentrated on northern and southeastern regions, while the northeastern is
    still underexplored. This is especially evident when analyzing the states of
    Alagoas and Sergipe, where only three species have been recorded so far. The
    present study aims to increase our knowledge on the diversity and distribution
    of Gerromorpha from Alagoas and Sergipe by obtaining specimens, recording
    new occurrences, elaborating lists of species, generating models of potential
    distribution, and determining key areas for sampling or conservation. A total of
    2,792 specimens were collected, belonging to 39 described species, 16 genera
    and five families. Among them, 31 represent new records from Alagoas and 32
    from Sergipe. Ecological niche modelling was performed only for species with at
    least ten occurrence localities within the study area. Therefore, eleven species
    were analyzed: Mesovelia mulsanti White, 1879, Me. amoena Uhler, 1894
    (Mesoveliidae); Limnogonus aduncus Drake &amp; Harris, 1930, Brachymetra
    albinervus (Amyot &amp; Serville, 1843), Rheumatobates crassifemur schroederi
    Hungerford, 1954 (Gerridae); Rhagovelia tenuipes Champion, 1898, R. whitei
    (Breddin, 1898), Platyvelia brachialis (Stål, 1860), Microvelia venustatis Drake &amp;
    Harris, 1933, Mi. quieta Drake &amp; Carvalho, 1954, and Mi. pulchella Westwood,
    1834 (Veliidae). Species occurrence was related to environmental suitability
    and compared to biomes of the mesorregions of Alagoas and Sergipe, and of
    their federal conservation units. Potential species richness was also related to
    lotic and lentic systems. The study shows that a lot of work is still needed in
    order to know in more detail the geographic distribution of semi-aquatic
    heteropterans from the states of Alagoas and Sergipe, and of the country as a
    whole.

3
  • DIOGO PIGNATARA COIMBRA
  • Investigation of hemoparasites in Callithrix (primates: callitrichidae) individuals from free living and captivity in the metropolitan region of Rio de Janeiro, Brazil

  • Advisor : DENISE MONNERAT NOGUEIRA
  • COMMITTEE MEMBERS :
  • DENISE MONNERAT NOGUEIRA
  • CLAUDIA BEZERRA DA SILVA
  • JORGE LUIS AZEVEDO DE ARMADA
  • MARISTELA PECKLE PEIXOTO
  • CARLOS EDUARDO DA SILVA VERONA
  • Data: Jul 31, 2020


  • Show Abstract
  • Neotropical primates are hosts of various hemoparasites species. Callithrix marmosets inhabiting the Rio de Janeiro metropolitan region interact with humans and can share possible zoonoses. The objectives of this study are: to identify at the species level hemoparasites of the marmosets of the metropolitan region of Rio de Janeiro through optical microscopy, morphometry and molecular genetics; estimate and compare the epidemiological values of prevalence and parasite mean intensity between in situ and ex situ localitions. Two collections were carried out in two in situ locations, Jardim Botânico do Rio de Janeiro (JBRJ) Universidade Federal Rural do Rio de Janeiro (UFRRJ), and two ex situ localitions, Biotério of the Universidade Federal do Rio de Janeiro (Biotério-UFRJ) and Wild Animals Triage Center of Rio de Janeiro (CETAS-RJ). Samples were also analyzed from the Wild Animals Recovery Center of the Universdade of Vale do Paraíba in São Paulo (CRAS-UNIVAP) as a control site. Animals captured were sedated and about 1 ml of blood was collected for blood smears and molecular genetic analysis. The slides were analyzed under a microscope with photographic record and morphometric measurements. Prevalence and mean parasite intensity were analyzed. DNA was extracted from the blood samples using the phenol-chloroform method. Primers were used for amplification of the 18S rRNA gene of Trypanosoma and ITS-1 for microfilaria by the polymerase chain reaction. The 18S rRNA gene amplicons were sequenced, aligned by BLAST® and submitted to phylogenetic analysis. It was found in the JBRJ samples Trypanosoma sp., Microfilaria and Babesia sp. In the UFRRJ and CETAS-RJ samples, Trypanosoma sp. Through the morphometric analysis, the Trypanosoma of the JBRJ and UFRRJ were identified as T. minasense with measures in the range expected for species in characters TL 28.4 and 48, PK 6.8 - 15 and B 2 - 6 μm. The amplified fragments for Trypanosoma presented 700 bp as the positive control, and the microfilaria fragments presented between 200 and 300 bp as in the literature. Sequencing of the PCR amplified fragments of the Trypanosoma 18S rRNA gene revealed genetic similarity above 98% with T. minasense, grouping in the same clade in the phylogenetic analysis. The morphometric data suggest that the microfilariae found are Mansonella marmosetae and Dipetalonema graciliformis, being possible the presence of more species. Through microscopy, in situ localities presented infection rate of 25% for Trypanosoma sp., 11% for microfilariae and 3% for Babesia sp. Ex situ localities presented infection rate of 2% for Trypanosoma sp. With molecular genetic data, the infection rate of Trypanosoma in situ was 43% against 14% in ex situ localities, on the other hand microfilariae was 21% and 44%, respectively. This result partially corroborates the hypothesis that in situ localities are more likely to have hemoparasitoses due to the diversity and availability of niches, contact with other specimens and to lower factors of physical impediment of the vectors. Differences regarding the microfilaria infection rates should be related to the density of hosts and the limitation of their movements.

4
  • URSSULA NASCIMENTO GUEDES
  • A new species and new records of Amphipoda (Crustacea: Peracarida) associated with rhodoliths in the Fernando de Noronha Archipelago, Pernambuco, Brazil

  • Advisor : ANDRÉ RESENDE DE SENNA
  • COMMITTEE MEMBERS :
  • ALESSANDRO PONCE DE LEÃO GIUPPONI
  • ANDRÉ RESENDE DE SENNA
  • FABIO VIEIRA DE ARAUJO
  • INGRID ÁVILA DA COSTA
  • MAGDA FERNANDES DE ANDRADE TUBINO
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • Data: Aug 28, 2020


  • Show Abstract
  • Very little is known about the diversity of species of Amphipoda Latreille, 1816, for oceanic
    islands in Brazil. This dissertation describes a new species of the genus Pariphinotus Kunkel,
    1910, family Phliantidae Stebbing, 1899, which is distinguished from other similar species by
    presenting the following characters: Pleopod 3 with two coupling setae to the peduncle, uropod
    1, peduncle not exceeding the distal margin of telson and the latest with subacute distal margin.
    This is the second species of the genus known from Brazil and the first recorded from the
    Fernando de Noronha Archipelago. The first record of the circuntropical species Synopia
    ultramarina Dana, 1853, is also made for the archipelago. Previously, this species was
    registered in Brazilian waters only for the states of Bahia and Espírito Santo. However,
    additional material was examined, in addition to Fernando de Noronha, also for the coast of the
    states of Ceará and Pernambuco. Morphological variations were observed between populations,
    based on the material studied and previous descriptions of the same species in the literature. In
    addition to these two species, Cymadusa filosa Savigny,1816, of the family Ampithoidae
    Boeck, 1871, Gibberosus myersi (McKinney, 1980), of the family Megaluropidae Thomas &
    Barnard, 1986, and Mayerella sp., family Caprellidae Leach, 1814, are also registered for the
    first time for the Archipelago of Fernando de Noronha. Finally, an additional record of the species Elasmopus longipropodus Senna & Souza-Filho, 2011, of the family Maeridae Krapp-Schickel, 2008, is the only one among the examined material previously known from the location. The material examined comes from the Fernando de Noronha Archipelago, state of Pernambuco, northeastern Brazil, and was collected by SCUBA diving, from rhodoliths beds, from the Ressureta channel, between Meio and Rata Islands. Additional material was collected off the coast of the state of Ceará, during environmental consultancies coordinated by Petrobras S. A., and off the coast of the state of Pernambuco, during the REVIZEE NE Project.

5
  • THAIS MATTOS ESTRUC
  • Origin and Distribution of the Lumbosacral Plexus Nerves of Two Didelphis Species (Didelphidae, Didelphimorphia)

  • Advisor : MARCELO ABIDU FIGUEIREDO
  • COMMITTEE MEMBERS :
  • ANDRÉ RODRIGUES BARRETO DA CUNHA VIANNA
  • LUCIANO DA SILVA ALONSO
  • MARCELO ABIDU FIGUEIREDO
  • MARCO AURÉLIO PEREIRA SAMPAIO
  • Data: Sep 3, 2020


  • Show Abstract
  • Morphological studies provide knowledge that allows understanding how animals interact with the
    natural environment or captivity. The aim of this study was to describe the origin and antimeric
    distribution of the lumbosacral plexus nerves of Didelphis aurita and D. albiventris, as well as to
    describe the skeleton and dimensions of the lumbar intumescence of the species in this study.
    Fourteen adult cadavers of D. aurita were used, seven males and seven females, from the Serra
    dos Órgãos National Park (PARNASO), 13 adult cadavers of D. albiventris, seven males and two
    females, from the collection of the Animal Anatomy Laboratory of the Federal University of
    Pampa (UNIPAMPA), and two males and two females from the Mammal Collection of the
    National Museum / UFRJ (MNRJ). The specimens were sexed, identified and fixed with perfusion
    of 10% formaldehyde solution. Then, they were dissected until exposure of the origins of the
    lumbosacral plexus nerves. The data were represented in absolute frequency and simple
    percentage. The right and left lumbosacral plexuses derived a trunk for the femoral and obturator
    nerves of the ventral branches of L3-L4 (75%) in D. aurita, and in D. albiventris the femoral
    nerve of L3-L4 (73.1%) and obturator nerve of L3-L4 (61.5%). In the two studied species there
    was formation of a lumbosacral trunk derived from branches of L5-L6-S1 in 78.6% in D. aurita
    and in 61.5% in D. albiventris. Lumbar intumescence originated from L2-L5 (46.2%) with an
    average length of 4.69 ± 0.62 cm in D. aurita and L2-L4 (38.5%) with an average length of 4.38 ±
    0,71cm in D. albiventris. There was a positive correlation between lumbar intumescence and
    rostrosacral length in D. aurita (p = 0.0141 and r = 0.6598) and D. albiventris (p = 0.0323 and r =
    0.5941). There was no significant difference in size between the lumbar intumescence of the two
    species (p = 0.3164). The origin and distribution of the lumbosacral plexus nerves, the skeleton
    and dimensions of the lumbar intumescence of the studied species show similarities with domestic
    and wild euterium mammals. The lumbosacral plexuses in D. albiventris and D. aurita were
    formed by contributions from the last four lumbar ventral branches of the spinal nerves (L3, L4,
    L5 and L6) and the first sacral (S1), being the most cranial origin also observed in primates and in
    Xenarthra species.

6
  • IVISON CORDEIRO BRANDÃO DE LIMA
  • Not only from Opercula live the Serpulidae Rafinesque 1815 (Annelida) – Discussion of new Morphological Characters for Utilization at the Group’s Systematics

  • Advisor : ANA CLAUDIA DOS SANTOS BRASIL
  • COMMITTEE MEMBERS :
  • ANA CLAUDIA DOS SANTOS BRASIL
  • HELIO RICARDO DA SILVA
  • ANDRE QUEIROZ DE PADUA
  • JOÃO MIGUEL DE MATOS NOGUEIRA
  • ELAINE CRISTINA DE SOUZA LIMA
  • Data: Oct 30, 2020


  • Show Abstract
  • Serpulidae is a diverse group of tubeworms, easily recognized by the calcareous
    tube and bright-colored radiolar crown. Traditionally, the identification of species in the
    group has focused on characteristics of the tube and, mainly, the operculum modified
    from one of the crown radioles, present in most genera. In Brazil, 46 species were
    registered until 2020, of which only nine were originally described in Brazilian territory.
    The objective of the present study was to carry out a new taxonomic study of the family
    on the Brazilian coast and to search for new characters useful in the identification of
    species. Sampling was made punctually in the intertidal region on states at the northeast,
    southeast and south regions of Brazil, on different substrates; the specimens were
    anesthetized with menthol, fixed with 4% formalin and kept in flasks with 70% ethyl
    alcohol. Additionally, specimens deposited in scientific collections at UFRRJ, UFAL,
    UERJ, and UFRJ National Museum were analyzed. A total of 26 species belonging to 13
    genera were analyzed, five of them being new occurrences for the Brazilian coast and one
    corresponding to a new species in the genus Spirobranchus. The knowledge about the
    Serpulidae family in Brazil has been extended in 11%, and structures of the animals'
    morphology were discussed, as they are not usually used in the group's taxonomy, but
    present great potential to refine the identification process of genera and species of
    serpulids.

7
  • ELAINE RODRIGUES MIRANDA NERY DA SILVA
  • Influence of the population density of larvae on the content of triacylglycerol, fecundity and size of females in Aedes aegypti (Linnaeus) (Díptera: Culicidae)

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • EMERSON GUEDES PONTES
  • JACENIR REIS DOS SANTOS MALLET
  • JAIRO PINHEIRO DA SILVA
  • JULIA DOS SANTOS SILVA
  • Marise Maleck de Oliveira
  • Data: Nov 30, 2020


  • Show Abstract
  • Given the importance of the Aedes aegypti as arboviroses vector, understanding the impact
    of abiotic factors, such as population density in the larval rearing s, during larval development,
    is fundamental to improve control methods. The aims of this work were to analyze the effects of
    population density on the triacylglycerol (TAG) reserves, fecundity and the size of mosquitos.
    To evaluate the influence of density on the amount of triacylglycerol in the different stages of
    development of A. aegypti, the larvae were reared in the following densities 0.04, 0.32 and 0.8
    larvae / mL, represented by D1, D2 and D3, respectively. It was observed that different larval
    rearing affected the amount of triacylglycerol on the different development stages of this insect.
    The group reared in a high population density (D3) presented greater storage of triacylglycerol,
    except when analyzing the amount of triacylglycerol μg/protein of fat body in blood-fed
    females. In addition, it was possible to observe a higher resistance to fasting, higher amount of
    laid eggs. Insects reared on D2 and D3 were larger than D1. This study provided interesting data
    for future investigations as to how densitiy of larval rearing affect the lipid metabolism
    concerning to synthesis and mobilization of triacylglycerol store in A. aegypti and how does it
    influences it size and the reproduction.

8
  • LUAN VALIM DOS SANTOS
  • Diferencial expression of brummer lipase and levels of TAG in different developmental stages and starvation of Aedes aegypti (Diptera: Culicidae)

  • Advisor : EMERSON GUEDES PONTES
  • COMMITTEE MEMBERS :
  • EMERSON GUEDES PONTES
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • LUCIANO APARECIDO MEIRELES GRILLO
  • Data: Dec 14, 2020


  • Show Abstract
  • Lipid storage in the form of triacylglycerol (TAG) is essential during the
    insect life cycle, as it enables body transformation during the pupal stage and supports
    energy expenditure during the early phase of adult life and reproductive maturation. The
    lipolytic activity of the brummer (bmm) lipase facilitates the insect energy system
    homeostasis. We observed the relationship between bmm lipase and lipid storage
    in Aedes aegypti larvae and adults. The bmm sequence was identified in A. aegypti,
    exhibiting a patatin-like phospholipase domain, reinforced by the presence of a catalytic
    dyad with serine and aspartate residues, revealing a high degree of similarity with other
    organisms. The bmm expression was differentiated in the larval phase and the adult
    animal fat bodies, following the TAG reserve dynamic. In larval stages L3, L4, and
    pupa, Bmm was expressed three times as much compared to stages L1 and L2. In the
    post-emergence (PE) and post-blood-meal (PBM) fat body of adult animals, the
    expression varied over several days. When post-emergence adult animals fasted,
    without sucrose, a very pronounced increase was observed from the third day onwards
    when compared to animals that did not fast. A significant decrease in the levels of TAG
    from the third day, which suggests Brummer’s participation in the process. Six hours
    after blood feeding, the levels of TAG increased suggesting a process of lipid reserve
    accumulation to guarantee oogenesis and reproduction. The bmm in A. aegypti responds
    positively to fasting and regulates the mobilization of TAG reserves in adult
    mosquitoes&#39; fat bodies.

9
  • ANDRIELLE RAPOSO RODRIGUES
  • Introduced species of Serpulidae RAFINESQUE, 1815 (ANNELIDA): A case study on the Sepetiba Bay, RJ.

  • Advisor : ANA CLAUDIA DOS SANTOS BRASIL
  • COMMITTEE MEMBERS :
  • ANA CLAUDIA DOS SANTOS BRASIL
  • KARINA ANNES KEUNECKE
  • CINTHYA SIMONE GOMES SANTOS
  • FABIO BETTINI PITOMBO
  • LUIS FELIPE SKINNER
  • Data: Dec 18, 2020


  • Show Abstract
  • Serpulidae is a family of filter-feeding, tubiculous, fouling and globally distributed
    polychaetes. They are animals with a very conspicuous morphology, usually composed
    of an operculum, a radiolar crown, thorax and abdomen. These animals are commonly
    translocated through vessels or floating debris. They can be found in port regions,as
    well as in places with a diversity of natural (e.g. rocks, mollusc shells) and artificial
    (e.g. pier, ship's hulls) substrates available for settle. The knowledge about the
    Serpulidae species within Sepetiba Bay is still scarce, aiming to expand this knowledge
    active collections were made in 15 places within the bay. Through morphological and
    systematic techniques it was possible to comprehend the local diversity, as well as the
    forthcoming of exotic species. As a result of this work seven species belonging to four
    genera were identified, one being native and the other six exotic. With this survey it was
    possible to report three new records for Sepetiba Bay (Salmacina ceciliae, H.dianthus
    and P. balboensis) and to confirm the presence of Spirobranchus tetraceros for the state
    of Rio de Janeiro. Updating the list of serpulid species occurring on Sepetiba Bay, Rio
    de Janeiro and Brazil, even as the list of exotic species of polychaete present on the
    Brazilian coast. Nevertheless, we recommend increase the effort in evaluating the
    invasive potential and monitoring the Brazilian marine environment, mainly on port
    regions.

Thesis
1
  • ISRAEL DE SÁ MACIEL
  • Acoustic ecology of Guiana dolphin (Sotalia guianensis) in Sepetiba bay and Ilha Grande bay

  • Advisor : RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • COMMITTEE MEMBERS :
  • ILDEMAR FERREIRA
  • RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • LILIANE FERREIRA LODI
  • LUCIANA DUARTE DE FIGUEIREDO
  • CAMILA DOMIT
  • RENATA SANTORO DE SOUSA LIMA MOBLEY
  • Data: Feb 10, 2020


  • Show Abstract
  • Acoustic repertoires may change in temporal and spatial scale, and may present
    changes influenced by the creation of new social alliances, changes in soudscape or
    geographical. Thus, the goal of this study is to evaluate the spatial and temporal changes
    in the acoustic repertoire of the Guiana dolphin (Sotalia guianensis). This study is based
    on a dataset of acoustic recordings in Sepetiba Bay from 1998 to 2002, new recordings
    from 2015 to 2018 in Sepetiba Bay and in 2017 and 2018 in Ilha Grande Bay. Temporally,
    changes in the acoustic parameters of whistles, frequency contours and signature whistles
    were compared. Spatially, frequency contours were compared between populations of
    Sepetiba and Ilha Grande bays. Still in spatial scale, the influence of anthropogenic noise
    and environmental variables on the acoustic parameters and occurrence was modeled.
    Temporally, the Guiana dolphin's repertoire may be stable for about 20 years. However,
    over time, there was a reduction in the diversity of whistles, a reduction in the duration
    of emissions, a reduction of over 90% in whistle rate, and an increase in the maximum
    and minimum frequencies. In the spatial comparison between bays we identified 180
    frequency contours in the population of Ilha Grande Bay and 53 in the population of
    Sepetiba Bay. The geographical variations observed are not only in the types of whistles
    emitted, but also in the diversity of the repertoires and their low sharing. Modeling
    indicated that Guiana dolphins vocalize more, with longer and more complex whistles in
    less noisy habitats. However, there is no change in the pattern of occurrence regarding
    noise levels, but due to environmental variables. Between bays it is still unclear the
    reasons that promote differences in acoustic diversity. However, both the temporal
    variation and the predicted by the spatial scale models indicate that the Guiana dolphin
    presents an acoustic behavior response similar to the anthropogenic noise level. However,
    environmental variables were more important than noise levels for occurrence.

2
  • LUIZ ANTONIO COSTA GOMES
  • Metacommunity structure of phyllostomid bats (Mammalia, Chiroptera) in Brazilian Atlantic Forest

  • Advisor : ADRIANO LUCIO PERACCHI
  • COMMITTEE MEMBERS :
  • Ricardo Moratelli Mendonca da Rocha
  • ADRIANO LUCIO PERACCHI
  • ANDRE FELIPPE NUNES DE FREITAS
  • CARYNE APARECIDA DE CARVALHO BRAGA
  • ILDEMAR FERREIRA
  • JAYME MAGALHAES SANTANGELO
  • MARCELO RODRIGUES NOGUEIRA
  • Data: Feb 19, 2020


  • Show Abstract
  • Metacommunity ecology has provided the understanding of how multiple species
    interact, vary and are organized in suits of communities throughout ecological gradients.
    Community composition is determined by combinations of environmental and spatial
    processes, and the emergent properties of species distribution form spatial patterns
    (metacommunity structures). We used 54 species of phyllostomid bats and 30 sites
    (with ≥ 19 species) along the Atlantic Forest biome of Brazil to (1) determine the
    species distribution, (2) characterize the metacommunity pattern, and (3) identify
    environmental and spatial characteristics that give rise to such pattern. Bats were
    analyzed in term of metacommunity considering all species and functional groups
    (carnivorous and herbivorous species). As environmental variables, we used 19 climate
    variables, which are a suit of variations of temperature and precipitation, and latitude
    and longitude to create spatial variables called Moran’s Eigenvectors Maps, which
    represent variation at broad to fine spatial scales. The Elements of Metacommunity
    Structure (coherence, range species turnover and range boundary clumping) were used
    to determine the best-fit idealized metacommunity pattern in relation to empirical
    distribution of bats. Canonical Correspondence Analysis and Variation Partitioning
    were used to determine the latent environmental gradient and the relative contribution of
    temperature, precipitation and space in structuring local species composition,
    respectively. We also tested the effect of Coastal and Seasonal forests on phyllostomid
    bat groups, using the Kruskal-Wallis test. Analyzes and tests were conducted in R and
    PAST softwares. Both the phyllostomid bat metacommunity, and carnivorous and
    herbivorous bats exhibited positive coherence, indicating that most species of each bat
    group responded to a latent environmental gradient. However, all phyllostomids showed
    a quasi-Clementsian structure, carnivores exhibited a quasi-nested structure with
    stochastic species loss, and herbivores showed a Clementsian structure. The detected
    environmental gradient comprised joint variation in temperature, precipitation, and
    space, and was pervasive in all bat groups. These three factors together explained from

    48.3% to 66.2% of variation in species composition among sites regarding bat groups.
    No pure effect of suits of environmental variables was found for all phyllostomids or
    carnivorous bats. However, pure space and precipitation features were significant for
    herbivorous bats. The quasi-Clementsian and Clementsian patterns highlighted by all
    phyllostomids and herbivores indicate that species with similar distributions share
    evolutionary and ecological characteristics forming groups of species along the
    observed gradient. Clementsian compartments were delimited by anthropogenic
    historical processes, such as sites comprising fragments of original Atlantic forests and
    sites comprising spatial alterations related to human land use. Conversely, the quasi-
    nested pattern with stochastic species loss presented by carnivores indicates that range
    boundaries of species were determined by species-specific environmental tolerances
    throughout the observed gradient. Phyllostomid bat species present non-random
    distributional patterns that are molded by a spatially-structured environmental gradients
    throughout the Atlantic forest biome in Brazil. Analysis of functional groups of species
    provided additional ecological information on species distributions that are obscured
    when considering a functionally heterogeneous group of species. Finally, habitat
    fragmentation associated with human activities likely plays a crucial role in modern
    phyllostomid species distributions throughout the Atlantic Forest of Brazil.

3
  • DIEGO MATTOS PENEDO
  • Phenotypic, cytogenetic and molecular genetic analysis in black-horned capuchin, Sapajus nigritus (Platyrrhini, Cebidae) from areas of Rio de Janeiro and São Paulo states, Brazil

  • Advisor : DENISE MONNERAT NOGUEIRA
  • COMMITTEE MEMBERS :
  • ANDRÉA MARIA DE OLIVEIRA
  • CARLOS EDUARDO DA SILVA VERONA
  • DENISE MONNERAT NOGUEIRA
  • HELIO RICARDO DA SILVA
  • LENA GEISE
  • MARIELA NIEVES
  • RODRIGO SALLES DE CARVALHO
  • Data: Jul 30, 2020


  • Show Abstract
  • The black-horned capuchin, Sapajus nigritus, is a Neotropical primate with a wide distribution in the Atlantic Forest (AF), from southeast Brazil to Misiones, Argentina. The species presents phenotypic and genetic diversity, often associated with geographical patterns. The coat coloration varies with intrapopulation differences, with transition in the predominance from black to brown, in the south-north distribution. Cytogenetic analysis in populations from Argentina showed a specific polymorphism in the chromosome pair 11. While in most Sapajus’ species this pair is the largest acrocentric, with a terminal extracentromeric heterochromatic (HC) block, in S. nigritus in these populations the total deletion of HC is described. However, the terminal He block has already been demonstrated in specimens from RJ. In addition to this polymorphism, phylogenetic data demonstrate paraphyly among samples from RJ and other localities along the distribution. These variations may correspond to a pattern of phylogeographic discontinuity described in AF at SP, associated to forest refuges occurring in Pleistocene. The objective of this study was to analyze the phenotypic and genetic diversity of S. nigritus in SP and RJ, investigating the coat patterns, the distribution of He in the par 11 and the molecular diversity in the state of RJ, comparing it with other localities. Individuals from five populations in the RJ state were analyzed: Ilha da Marambaia (IM), Reserva Biológica de Poço das Antas (RBPA), Parque Nacional do Itatiaia (PNI), da Tijuca (PNT) and da Serra dos Órgãos (PARNASO); as well as ex situ specimens from Guaratiba/RJ (Gua) and cities of São Paulo: capital (cSP), São José dos Campos (SJC), São Sebastião (SS), Paraibuna (PB) and Campos do Jordão (CJ). Specimens of S. nigritus at the Museu Nacional do Rio de Janeiro (MNRJ), from Angra dos Reis, Itatiaia, Paraty and Teresópolis, were included in the phenotypic analysis. Coloration of the back, belly, limbs, tail and face were evaluated. The presence and distribution of He were analyzed using classical and molecular cytogenetic techniques. The phylogenetic relationships were inferred based on the mitochondrial genes cytochrome c oxidase I, II and cytochrome b, including sequences available in GenBank®. In 49 individuals captured, six ex situ and eight MNRJ specimens were identified brown (n=37) and black (n=26) coat patterns, with intrapopulation variation, predominating black to the west (PNI and MNRJ) and brown to the east (IM and PNT). The association of this finding with the predominance of the black pattern described in an SP population confirms the black-brown variation in the SP-RJ distribution. The pair 11 with the deletion of HC was identified in the samples to the east (IM, Gua, PNT, PARNASO and RBPA), while to the west both patterns were identified, without (cSP, CJ and SS) and with (SJC, PB and PNI) He block. Molecular divergence was observed between the samples from RJ and those from SP, PR and Argentina, including the PNI, forming paraphyletic clades. The intraspecific diversity observed in S. nigritus may represent an evolutionary significant unit (ESU) and confirm the sampled region as a phylogeographic discontinuity point for the species.

4
  • ELVIS ALMEIDA PEREIRA SILVA
  • Diversification and evolution in neotropical anurans through phylogeography and historical biogeograph

  • Advisor : HELIO RICARDO DA SILVA
  • COMMITTEE MEMBERS :
  • HELIO RICARDO DA SILVA
  • DENISE MONNERAT NOGUEIRA
  • RICARDO UTSUNOMIA
  • PATRICIA ALVES ABRUNHOSA
  • SARAH MÂNGIA
  • ELIANA FARIA DE OLIVEIRA
  • FELIPE CAMURUGI ALMEIDA GUIMARÃE
  • Data: Oct 6, 2020


  • Show Abstract
  • Biology has as one of its main questions, the search for patterns of distribution
    of organisms. The science that seeks to identify the processes that led to the formation of
    these standards is Biogeography. As access to molecular data increased between the 1970s
    and 1980s, the study of Biogeography expanded and then the term Phylogeography was
    created, whose main objective is to understand the processes that acted on the
    geographical distribution of species, based on genetic data. Testing the patterns and
    processes that led to these distributions in philopatric organisms, with low vagility and
    high rates of endemism is interesting when trying to understand historical
    geomorphological and climatic events. The neotropical region is one of the most diverse
    regions on the planet, as it is home to enormous biodiversity, with the greatest diversity
    of amphibians in the world, in addition to having a diversified geomorphology due to the

    historical complex of evolution of the continent and different types of ecoregions. In the
    past millions and years, the South American continent has undergone severe changes due
    to marine incursions, uplift of mountain ranges and the closing of the Isthmus of Panama,
    which changed the climate of South America completely. In addition to these geological
    events, climatic events also acted in the modification of the neotropical landscape several
    times, causing forest morphoclimatic domains to expand and retract over time, and
    consequently, species dependent on forest habitats, fluctuated with the events of
    expansion and retraction of these forests. Anurans occupy a wide range of habitats, have
    low vagility and many species possibly followed the forest cycles, making them good
    models for understanding the evolution of these morphoclimatic domains. With this, the
    present thesis presents two chapters, the first, phylogeographic structure of
    Boana
    crepitans
    and the second, biogeographic aspects of the species of the Sphaenorhynchini
    tribe. In addition to pointing out information about the historical connections between the
    forest morphoclimatic domains of the Amazon and the Atlantic Forest and identifying
    some main processes that have acted in the diversification of these taxa.


2019
Dissertations
1
  • OSÉIAS MARTINS MAGALHÃES
  • RELATIONSHIPS BETWEEN ENVIRONMENTAL FACTORS AND ALAR AND SEXUAL DIMORPHISMS In ROBUST RHAGOVELIA GOULD, 1931 (INSECTA: HEMIPTERA: VELIIDAE)

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • FRANCISCO GERSON ARAUJO
  • TATIANA NASCIMENTO DOCILE
  • Data: Feb 21, 2019


  • Show Abstract
  • Gerromorpha display two phenomena well studied in temperate areas: alary polymorphism, in
    some species individuals can be apterous, micropterous, brachypterous, or macropterous, with
    different forms coexisting in a same population; and the variation of somatic characteristics
    between males and females, which can be relate to sexual conflict. Rhagovelia robusta Gould,
    1931 is a species where both phenomena are evident. Thus, the present dissertation aims to
    define the relations between alary and sexual dimorphism in R. robusta, as well as the role of
    environmental factors in the determination of alary forms. We evaluated patterns of shape and
    size in different alary forms and sexes of R. robusta and the relations between alary and sexual
    dimorphisms. Our results shows the significant variations on certain structures between males
    and females, as well as between males of different alary forms. Males presents allometric
    modifications on the pronotum and posterior femur, and appear are integrated to each other.
    Such integration is tied to the adaptive responses to the needs for dispersal and reproduction.
    Subsequently, we analyzed how environmental factors influence the abundance of alary forms
    of R. robusta. Our results show that different climatic conditions, occurring during the
    developing period of the individuals, influence the abundance of the alate morphotype. A
    higher abundance is associated to higher mean temperatures and rainy seasons, while it is
    negatively affected by lower temperatures and dry seasons. These results reflect the adaptation
    of the species, through the different morphotypes, to the variable resource availability through
    time. During dry seasons, the environment is more homogeneous and there are less resources,
    thus it is less viable to invest in the flight apparatus and the costs involved in the dispersion.
    On the other hand, the apterous males that are proportionally more abundant during these
    periods have higher copulation capacity, ensuring a higher reproduction rate and the continuity
    of the species in the habitat. During high pluviosity seasons, with higher heterogeneity and
    resource availability, it is possible to invest more in the development of alate individuals and
    in the dispersion to new areas.

2
  • EDUARDO CABRAL CASADO LIMA
  • Characterization of sound emissions of humpback whales, Megaptera novaeangliae (Borowski, 1781) in the Abrolhos region from 2005 to 2016

  • Advisor : SHEILA MARINO SIMAO
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • ILDEMAR FERREIRA
  • LUCIANA DUARTE DE FIGUEIREDO
  • MARIANA DE ASSIS ESPÉCIE
  • RODRIGO HIPÓLITO TARDIN OLIVEIRA
  • SHEILA MARINO SIMAO
  • Data: Feb 22, 2019


  • Show Abstract
  • The general objective of the study was to analyze the variation in the structure of the humpback whale song (Megaptera novaeangliae) in the Bank of Abrolhos region, during the period from 2005 to 2016, describing the hierarchical level of Phrases and Themes throughout this period. Records of vocalizations of whales were conducted by the Humpback Whale Institute team (IBJ), between 2005 and 2016, in the region of Abrolhos, Bahia State, Brazil. The hierarchical level of Phrases and Themes was read from the Raven 1.5 software, evaluating five parameters for sentences: (1) Low frequency (Hz); (2) High frequency (Hz); (3) Delta Frequency (Hz); (4)Peak Frequency (Hz); (5) Delta time (s). The mean, standard deviation (SD), minimum value (vmin) and maximum value (Vmax) of each parameter were calculated in each sentence. Variance analyses (ANOVA) were performed and Tukey&#39;s test was applied only in sentences that occurred in two years or more to verify if there were significant variations between the years of study. With the value of the Post Hoc test &gt; 0.05 not representing significant variation a year. At the hierarchical level of themes, the units that comprised the best visualization sentences were selected to analyze the measurement of two parameters measured in the Raven1.5 software: (1) dominant frequency (Hz) and (2) duration of time (s). We analyzed 6 hours, 07 minutes and 04 seconds with a 9-year scope for the study, being, only the year 2010, presenting many noises in the samples, therefore not used in the analyses. The results show a quantity of 16 phrases and 13 themes
    throughout the years of study. It is evidenced, therefore, that the song of the Humpte whale is quite variable in relation to its structures, Units, Phrases and Themes, not presenting a fixed pattern in its corner. Phrases and themes that were found in the present work, were also found around the world. An example is the topic 5, composed of sentence 6, which in 2006 is very similar to that found in Madagascar in the same year. This fact may suggest that there is a learning transmission happening in the feeding areas may be occurring in the feeding area in Antarctica. The follow-up over the years will allow to evaluate the changes occurring in the reproductive seasons, assisting in the understanding of the evolution of the themes and phrases, reinforcing the idea that there may be similarities between them with populations from other places to around the
    world.

3
  • RICARDO IGNACIO CASTRO ÁLVAREZ
  • Polychaetes associated with rocky shores from Sepetiba Bay, RJ

  • Advisor : ANA CLAUDIA DOS SANTOS BRASIL
  • COMMITTEE MEMBERS :
  • ANA CLAUDIA DOS SANTOS BRASIL
  • KARINA ANNES KEUNECKE
  • ELAINE CRISTINA DE SOUZA LIMA
  • FABIO BETTINI PITOMBO
  • TITO CESAR MARQUES DE ALMEIDA
  • Data: Feb 25, 2019


  • Show Abstract
  • Rocky shores are ecosystems of great species richness, abundance and endemism of benthic
    organisms; polychaeta is one of the most abundant and diverse, occurring in microhabitats
    and forming associations with other organisms as algal tufts and mussel banks. The present
    study is the first work with high taxonomic resolution of polychaeta associated with the rocky
    shores in Sepetiba Bay, including different microhabitats and a large sample. The aim of that
    study is comparing the species richness, composition and abundance of polychaetes
    associated with algal tufts and mussel banks in five places in Sepetiba Bay, as well as, to
    identify and inventory polychaetes associated with rocky shores. Algal tufts, in general,
    exhibit higher species richness than mussel banks; however, mussel banks had higher
    similarity than algal tufts. No exclusive species were detected for each environments.
    Including all sampling points, algal tufts from Praia do Sino presented the highest species
    richness. In total 62 species were sampling, the most abundant were Naineris aurantiaca,
    Timarete caribous and Pseudonereis sp. Among the species found four are new records for
    the Brazilian coast, one new record for the southeast region and 33 are new records for the
    Sepetiba Bay, besides another important result to the redescription of N. aurantiaca. The
    present work to increase the knowledge about the polychaetes species in associations with
    rocky shores and allowed to detect some species that involve complicated taxonomic
    questions and are potential new species for the science.

4
  • BRUNO DO NASCIMENTO SOARES
  • Taxocenosis of immature of Diptera (Insecta) associated with Aquatic Macrophytes in a pond coastline: a spatio-temporal approach

  • Advisor : JAYME MAGALHAES SANTANGELO
  • COMMITTEE MEMBERS :
  • JAYME MAGALHAES SANTANGELO
  • JARBAS MARCAL DE QUEIROZ
  • ALBERT LUIZ SUHETT
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • Data: Feb 26, 2019


  • Show Abstract
  • Aquatic macrophytes usually proliferate in aquatic ecosystems with favorable conditions. Under such scenario, macrophytes may occupy great areas of the water surface and water column of lentic systems, playing an  important ecological role in the structure and distribution of animal communities that inhabit there. In adittion,
    macrophytes are sensitive to human activities . For this reason, the aim of this study was to determine the composition, species richness and abundance of mosquito larvae associated to the roots of floating macrophytes (Eichhornia crassipes), in spatio-temporal approach at Imboassica lagoon, located in Macaé city, RJ. Sampling was performed in six points with permanent stands of E. crassipes in August (winter) andDecember (summer), 2015. Chironomid larvae were collected through the sweeping method, using a "D" type net followed by a entomological scoop. Additionally, sediment samples were collected under the stands, Sampling stations were also sampled for granulometric composition and content of organic matter in the sediment in addition to total nitrogen, dissolved organic carbon, total phosphorus, orthophospates, temperature, pH, electric conductivity, dissolved oxygen, turbidity, total solids in suspension and chlorophyll a content. Abiotic variables were used to group sampling stations in winter and summer with Principal Component Analysis (PCA). Abundance was The abundance of chironomids was compared between seasons with Paired sample t-tests and species richness was compared with rarefaction curves. Permutational multivariate analysis of variance (PERMANOVA) was used to compare species composition. Finally, Analysis of Canonical Correspondence (ACC) was performed to describe which environmental variables best explained the patterns of species distribution. By the end of the study 1.539 specimens associated to the root of E. crassipes were collected(1.292 in winter and 247 in summer). Goeldichironomus, Chironomus, Culicoide, and Polypedium were the most abundant taxa. Disease vector species were not registered. No difference in abundance was detected between winter and summer. However, more species were observed in summer. Species composition did not differ between winter and summer. Finally, a positive correlation of the most abundant taxa was observed with lower temperature, and high concentrations of dissolved oxygen, total solids in suspension and chlorophyll a content. Only Chironomus displayed a positive correlation with smaller values of dissolved oxygen. Permanent stands of the macrophyte E. crassipes harbor high densities of chironomid larvae, which present high tolerance to eutrophic systems such as Imboassica lagoon.

5
  • MARIANA SAMPAIO CASIMIRO
  • THE USE OF TERRESTRIAL ARTHROPODS IN THE EVALUATION OF AREAS IN THE PROCESS OF ECOLOGICAL RESTORATION

  • Advisor : JARBAS MARCAL DE QUEIROZ
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • JAYME MAGALHAES SANTANGELO
  • JARBAS MARCAL DE QUEIROZ
  • ANDRE FELIPPE NUNES DE FREITAS
  • LUIZ FERNANDO DUARTE DE MORAES
  • Data: Mar 15, 2019


  • Show Abstract
  • The development of easy-to-observe measures of successful restoration is essential for
    monitoring from ambitious goals proposed by the global restoration (eg Bonn
    Challenge, New York Declaration on Forests). Among the arthropods, ants have a long
    history of environmental monitoring. An important task of ecological studies is to
    understand and quantify environmental factors that influence species distribution. Ants
    compose a large proportion of biomass in ecosystems; and has a long history of
    environmental monitoring. Therefore, the general objective of this work is to analyze
    the effects of tree species used for the restoration of degraded soils in the structure of
    the ants assembly and their effects along the restoration time gradient. Initially we did a
    meta-analysis with global works that approach ants as bioindicators in areas with
    different stages of succession. As a second step, we sampled ants under a total of 46
    individuals in four target species (23 leguminous and 23 not-leguminous). As a result of
    the meta - analysis, the recovery of ant diversity was faster in tropical than in temperate
    ecosystems. Restoration of ant functional groups occurred faster than species richness.
    Trends in species composition and functional groups were less predictable than in
    species richness and functional groups. According to the second chapter, functional
    species and groups of trees influenced the arthropod community, but did not influence
    the ant community.

6
  • MARIANA MARQUES MARTINS
  • Feeding habits and trophic ecology of two syntopic species of sciaenid Micropogonias furnieri and Ctenosciaena gracilicirrhus in a tropical bay in southeastern Brazil

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • ALEJANDRA FILIPPO GONZALEZ NEVES DOS SANTOS
  • FRANCISCO GERSON ARAUJO
  • LUCIANO NEVES DOS SANTOS
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • RAFAEL DE ALMEIDA TUBINO
  • Data: May 8, 2019


  • Show Abstract
  • The analysis of fish diet is of great importance to understand not only the coexistence of
    these groups of organisms, but also the processes developed in ecosystem in which they
    inhabit. The objective of this study was to analyze the diet of twoc Sciaenidae species,
    Ctenosciena gracilicirrhus and Micropogonias furnieri and to assess the occurrence of
    ontogenetic and seasonal variations in diet, besides the possible mechanisms used to
    allow the coexistence of these abundant syntopic species in the outer zone of Sepetiba
    Bay. The tested hypothesis is that these species closely related in form, have
    partitioning of food resources to coexist in Sepetiba Bay and that occur changes in
    feeding habits along the growth. The stomach contents of 198 specimens of M. furnieri
    (85-280 mm of total length) and 198 of C. gracilicirrhus (49-131 mm in total length)
    obtained from quarterly daytime bottom trawls performed between the winter of 2012
    and the fall of 201 in three zones (internal, central and external) of the Bay of Septiba,
    RJ were examined. Different patterns in diets between species, size classes and seasons
    were determined by the Non-Metric Multidimensional Scalin. Significant differences
    were detected in the diet between the two species (Pseudo-F = 5.16, p = 0.001) and
    between size classes (Pseudo-F = 2.23, p = 0.001), but not between seasons (F = 0.36, p
    = .920), according to PERMANOVA. Micropogonias furnieri fed mainly on Polychaeta
    and Caprella, while C. gracilicirrhus preferred Caprella. Micropogonias furnieri
    prefered Crutacea in the smaller size classes, extending to the use of Polychaeta in
    larger size classes. Ctenosciena gracilicirrhus showed preference for Caprella, which
    was more clearly observed in larger size classes. No significant seasonal variations were
    observed for the two species. Both species presented a narrower trophic niche with
    increasing in size, thus characterizing a trend towards specialization, also confirmed
    through the Amundsen diagram, with M. furnieri preferring Polychaeta, and C.
    gracilicirrhus specializing in Caprella. As expected, a high intraspecific overlap of
    intraspecific trophic niche was observed between size classes within each species, but
    not at an interspecific level, with both species using different dietary resources. The
    hypothesis that the two species closely related in form present partition of the trophic
    niches as a mechanism to facilitate coexistence was accepted

7
  • LUCAS DE ASSIS SILVA ANDRADE
  • The importance of an RPPN for avifauna: studies on richness, composition and conservation

  • Advisor : ILDEMAR FERREIRA
  • COMMITTEE MEMBERS :
  • ILDEMAR FERREIRA
  • BRUNO PEREIRA BERTO
  • SERGIO THODE FILHO
  • Data: May 15, 2019


  • Show Abstract
  • The Atlantic Forest is one of the most diverse biomes in the world. It is estimated that a total
    of 1,361 species of vertebrates, among which 567 are endemic, this fact associated to the great
    fragmentation of its territory, leads to the classification of a hotspot, with priority area for
    conservation. Brazil, as a whole, contains a vast diversity of birds, with almost two thousand
    species, being the second most diverse group in its territory. The main strategies for the
    conservation of Brazilian biodiversity are focused on the creation and maintenance of
    conservation units. Currently, RPPNs are considered a great possibility of expansion of the
    SNUC, since it is a category that integrates civil society and because it can be easily created,
    as well as presenting high rates of conservation positives. Therefore, the main objective of
    this work was to inventory the species of birds present in the Private Reserve of the Natural
    Heritage of Porangaba and its surroundings. And the specific objectives, related to the
    Reserve and its surroundings, were: to estimate the richness of the bird fauna; describe the
    composition of the bird community; determine species abundance; to classify the species of
    birds in relation to their trophic guilds; analyze the conservation of avifauna according to
    dependence on forest habitats, the degree of endemism and the risk of extinction of the
    species. The present study was developed in the Porangaba Natural Heritage Private Reserve,
    with an area of 84.4 hectares, located in the city of Itaguaí, RJ. Data collection took place
    between May and December 2018. Two complementary methodologies, Mackinnon lists and
    fog networks were adopted for the survey of the avifauna. The birds are classified according
    to: trophic guilds; forest dependency; endemism; conservation status. In total, 162 bird
    species were registered in the RPPN area and in their surroundings, distributed in 47 families
    and 21 orders. The five most representative families, that is, with the largest number of
    species, were: Thraupidae (18); Tyrannidae (18); Trochilty (12); Thamnophilicity (8);
    Psittacity (8). The average richness did not differ between dry and rainy seasons. The majority
    (37%) of the bird species recorded at the study site belonged to the insectivorous guild,
    followed by omnivores. Six species of the study site are classified as almost endangered at
    international level (IUCN). Amazona rhodocorytha is also threatened at the state and national
    level. Regarding species restricted to a specific biome, 42 bird species from the study site
    were classified as endemic to the Atlantic Forest. Additional research, with an even longer
    collection period, is likely to indicate a greater richness of bird species. The present study
    demonstrates the importance of Conservation Units, in particular the RPPN, for the
    preservation of avifauna.

8
  • DANIELE DE AGUIAR MAIA
  • Comparative analysis of mosquito community sampling methods (Diptera: Culicidae) in an area of Atlantic Forest fragment of Brazil

  • Advisor : JERONIMO AUGUSTO FONSECA ALENCAR
  • COMMITTEE MEMBERS :
  • HERMANO GOMES ALBUQUERQUE
  • ILDEMAR FERREIRA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • JULIA DOS SANTOS SILVA
  • RONALDO FIGUEIRÓ PORTELLA PEREIRA
  • Data: Aug 8, 2019


  • Show Abstract
  • Fauna surveys of mosquitoes in areas of natural environment are of considerable importance in ecological studies. Several traps have been developed to aid in the collection of eggs and immature mosquitoes, and some of these traps are developed from plastic, bamboo and tire containers and are being used for the purpose of improving the surveillance of biological vectors. The present work evaluated and compared the sampling methods using traps (bamboo, larvitramps and ovitraps), in order to study the viability of these different traps and detect the most accepted by Culicidae females of epidemiological importance in a fragment of Atlantic Forest of the Association of Navy Steers (ATA) located in the municipality of Nova Iguaçu, state of Rio de Janeiro. During the sampling period, from July 2017 to June 2018, 1,854 specimens of Culicidae were identified, belonging to 16 species, two of which are epidemiologically important in the transmission of arboviruses: Haemagogus (Con.) leucocelaenus (Dyar & Shannon, 1924) and Aedes (Stg.) albopictus Skuse, 1984. The dominant species were: Limatus durhamii Theobald, 1901 (45.0%), Limatus pseudomethisticus Bonne-Wepster & Bonner, 1920 (23.0%), Culex (Car.) Iridescens (Lutz, 1905) (12.6%) and Trichoprosopon (Tri.) digitatum Rondani, 1848 (10.4%). It was observed that the traps of larvitrampas presented greater acceptance for pregnant females to lay their eggs, followed by the traps of ovitrap. The study provided relevant information about the knowledge regarding the use of artificial containers by culicidae, indicating genetic plasticity that directs them evolutionarily towards the domiciliation of some species, since finding them in tire traps shows affinity with the anthropic environment

9
  • MÁRCIO MORAIS SILVA
  • ANALYSIS OF THE DIET OF TAMANDUA TETRADACTYLA LINNAEUS, 1758 (PILOSA: MYRMECOPHAGIDAE) FROM RIO DE JANEIRO AND MINAS GERAIS, BRAZIL

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • JULIANA MOURÃO DOS SANTOS RODRIGUES
  • FERNANDA AVELINO CAPISTRANO DA SILVA
  • CECÍLIA BUENO MOACYR DE LIMA E SILVA
  • BRUNO CLARKSON MATTOS
  • Data: Dec 18, 2019


  • Show Abstract
  • The collared anteater, Tamandua tetradactyla Linnaeus, 1758 (Pilosa:
    Myrmecophagidae), is a small mammal predator of ants and termites. Using its nose to
    locate and its claws to break the structure of the colonies, this animal is able to capture
    its prey with the tongue. Despite of the knowledge about its diet, there are few studies
    describing which species are actually consumed by these mammals. The aim of this
    study was to investigate the diversity and abundance of insect species in the collared
    anteater diet and verify if there is any pattern. To evaluate that, eight samples of
    stomach contents of T. tetradactyla, roadkilled on the BR-040 highway between the
    cities of Duque de Caxias (RJ) and Simão Pereira (MG), were collected from 2009 to
    2014 and analyzed. Stomach contents were removed and preserved in 70% ethanol until
    analyzed under a stereomicroscope and identified at the lowest taxonomic level
    possible. A total of 22,832 specimens were obtained, distributed in 54 insect taxa of
    three orders: Blattodea (Isoptera), Coleoptera, and Hymenoptera. The most abundant
    taxa was Isoptera, represented mainly by the genus Nasutitermes Dudley, 1890 with
    12,352 specimens found. To compare the similarity in species composition among the
    eight samples, we used the Jaccard’s test, which showed low similarity between them,
    suggesting that these collared anteaters eat without any apparent pattern, but according
    to their individual preferences. However, three species were common among the
    samples: Camponotus atriceps (Smith, 1858), C. rufipes (Fabricius, 1775) and
    Cephalotes pusillus (Klug, 1824). Such species are very common in areas of the
    Atlantic Forest disturbed by human activities, such as cities and roads. Total
    precipitation in the month of collection was positively correlated with the richness of
    insect species, suggesting that this factor influences the richness of food sources
    available for the mammals.

Thesis
1
  • MARIA LUIZA RIBEIRO DE OLIVEIRA
  • Reproductive compatibility and morphological characterization of sperm in species of the genus Triatoma (Hemiptera, Reduviidae, Triatominae)

  • Advisor : JACENIR REIS DOS SANTOS MALLET
  • COMMITTEE MEMBERS :
  • JACENIR REIS DOS SANTOS MALLET
  • ANGELA ALVES DE ALMEIDA
  • CLEBER GALVÃO
  • ALICE RICARDO DA SILVA
  • JERONIMO AUGUSTO FONSECA ALENCAR
  • RENATO DA SILVA JUNIOR
  • ELIDIOMAR RIBEIRO DA SILVA
  • Data: Feb 21, 2019


  • Show Abstract
  • Spermatozoa are among the most diverse cell types, and their morphologies often provide
    data that can be used to reliably evaluate phylogenetic relationships. They can also help to
    clarify the nature of “specific complexes”, which are common among triatomines. In the
    present study, we evaluated the copulation behavior of Triatoma rubrovaria and the structural
    morphology of sperm from T. carcavalloi, T. infestans, T. pintodiasi, and T. rubrovaria.
    Copulatory behavior was described from the moment males and females genitalia joined until
    they separated. Insemination was confirmed by the presence of a spermatophore in the
    female’s bursa copulatrix. To measure their sperm, males were dissected and their seminal
    vesicles were removed, squashed on glass slides, and then spread, fixed, and observed under a
    photomicroscope. The images obtained were analyzed to measure the sperm. Seminal vesicles
    were also prepared for transmission electron microscopy. We performed K-means clustering
    separately for each species to group their sperm based on morphology. The differences in
    spermatozoa length among species of Triatominae, sperm types, and the interaction between
    species and sperm type were assessed with a two-way analysis of variance (ANOVA). The
    copulation time in T. rubrovaria was 3 to 5 min, which was sufficiently long for
    spermatophore transfer. All taxa showed polymorphic (short and long) sperm, with significant
    differences in the lengths of sperm among taxa. Using electron microscopy, the sperm cells of
    the four taxa examined were found to have similar ultrastructural morphology, confirming the
    hypothesized synapomorphies of sperm within the suborder Heteroptera

2
  • TAILAN MORETTI MATTOS
  • The use of taxonomic distinctness, functional diversity and trophic modeling as tools to evaluate fish assemblages in reservoirs with different hydro-environmental configurations

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • ALBERT LUIZ SUHETT
  • LUISA RESENDE MANNA
  • MIRIAM PILZ ALBRECHT
  • RONALDO ANGELINI
  • Data: Feb 22, 2019


  • Show Abstract
  • The construction of reservoirs, blocking the lotic systems, creates physical barriers that
    alter the flow regime and create new physic-chemical conditions in the new
    environment, besides acting as a barrier, preventing the free migration of aquatic
    organisms. The lentic environment also facilitates the introduction of non-native fish
    species, causing local extinction of a large number of fish species, especially those
    more specialized and less susceptible to new environmental conditions. The increasing
    number of reservoirs in tropical rivers is threatening aquatic biodiversity on an
    unprecedented scale, posing a major challenge for fish populations, especially for large
    migrators. The objective of this work was to evaluate and compare fish assemblages in
    eight reservoirs with different hydro-environmental configurations, associated to the
    Paraíba do Sul river basin: 1) reservoirs that bar the main RPS channel; 2) Reservoir in
    cascade derived from waater abstraction from RPS and, 3) reservoirs isolates. Three
    approaches were used: functional and taxonomic distinction, functional diversity and
    trophic modeling. Three approaches were used: functional and taxonomic distinction,
    functional diversity and trophic modeling. To evaluate the functional, taxonomic and
    functional diversity of the reservoirs, the fish community was sampled monthly in the
    summer of 2011 and in the winter of 2017. Thirty measurements in fish (26
    quantitative and four categorical), representing functional attributes associated with
    locomotion, feeding, life strategy and habitat use were taken in 34 species of the
    different reservoirs. The trophic modeling was elaborated only for the Ribeirao das
    Lajes Reservoir (RRL), based on monthly sampling (September / 2015 to July / 2017) of
    different consumer compartments (birds, zoobenthos and fish) and on available
    information on producers, non-fish consumers and detritus. Two models were
    constructed for the Ribeirao das Lajes Reservoir, being an annual model, representing
    the scenario of high quota in the reservoir (MCA) and another additional model
    representing an adverse condition, with reduced water quota in the reservoir (MCB).
    Differences were detected in fish assemblages of the different types of reservoirs
    (main channel, cascade and isolates). The number of species did not differ among the
    reservoirs, except in Tocos, which was significantly smaller when compared to the
    other reservoirs (F = 6.9 P <0.001). The highest taxonomic and functional
    distinctiviness were found for the isolated reservoirs, and the inverse of this pattern
    was found for the reservoirs that bblock the main channel of the Paraíba do Sul river.
    This suggests that the fish fauna in these latter types of reservoir is probably composed
    of species phylogenetically close and morphologically similar with greater taxonomic
    and functional redundancy. The Santana reservoir, the first in the cascade system,

    xiii
    presented the highest levels of functional diversity, with high richness and functional
    uniformity, low originality and high exclusivity. Contrary to the expectations, the Santa
    Branca, Funil and Pombos Island reservoirs (built in the main channel of the Paraíba do
    Sul River) presented the lowest values of these indices, suggesting high functional
    redundancy. Tocos, despite being an isolated reservoir and smaller area, presented the
    highest values of divergence and functional specialization. The matter and energy
    brought by the inflow water providing a greater habitat diversity in the reservoirs that
    block the main channel of the river do not seem to be the most important determinant
    factors for the roles developed by the fish in the reservoirs. The models elaborated in
    the RRL revealed that the main base compartments (producers) were Leaf-Seeds-Fruits
    and Periphyton, surpassing Phytoplankton. The compartments of Selective Birds (NT =
    3.8), Generalist Birds (NT = 3.7) and the species of piscivorous fish Hoplias malabaricus
    (NT = 3.8) and Cichla spp. (NT = 3.6) presented the highest NTs estimated for the web.
    The main key species of the system were generalist birds, and the fish R. quelen and H.
    malabaricus. Cichla spp., even not being considered as a key species, presented high
    relative biomass and high impact on the web, also showing great relevance for the
    ecosystem. No differences were found in the trophic web between MCA and MCB,
    with the biomass of some compartments varying between the scenarios modeled. The
    Ancestry value was 25.9, with Overhead of 74.2, indicating that the RRL is a mature
    ecosystem. Only 34 species were recorded in the eight reservoirs, seven of which were
    non-native species (ENN). However, studies recorded the occurrence of 89 fish species
    for the lotic stretches of the Paraíba do Sul River, a strong indication that reservoirs
    actually act as filters, selecting species with specific attributes and facilitating the
    establishment of ENN. Based on this study, it is suggested that the construction of
    dams should be done only for the purpose of water supply and irrigation, and that they
    do not block the main river channel, in order to avoid drastic influence on the services
    provided by these lotic systems, thus contributing to the maintenance of biodiversity.
    As an alternative to power generation, investments in clean energy sources are
    suggested, but with less impact on the environment.


3
  • JULIANA MOREIRA DE OLIVEIRA
  • Morphological and Molecular study of Anacanthorus spp. (Monogenea: Dactylogyridae) parasitizing serrasalmid fish
    (Characiformes) in Brazil

  • Advisor : JOSE LUIS FERNANDO LUQUE ALEJOS
  • COMMITTEE MEMBERS :
  • ANDERSON DIAS CÉZAR
  • DIMITRI RAMOS ALVES
  • FABIANO PASCHOAL DE OLIVEIRA
  • FRANCISCO GERSON ARAUJO
  • JOSE LUIS FERNANDO LUQUE ALEJOS
  • LUIS CLÁUDIO MUNIZ PEREIRA
  • RAQUEL DE OLIVEIRA SIMOES
  • SIMONE CHINICZ COHEN
  • Data: Feb 27, 2019


  • Show Abstract
  • With the aim of studying the diversity and the host-parasite association of Anacanthorus
    spp. parasitizing fish of the family Serrasalmidae, between October 2015 to July 2016
    parasitological surveys of 11 species of serrasalmids, from 4 different localities, the
    Miranda River (State of Mato Grosso do Sul), the Mogi Guaçu River (State of São
    Paulo), the Upper Paraná River (State of Paraná) and the Xingu River (State of Pará).
    Hosts were analyzed immediately after capture to verify the presence of parasites.
    Parasites were analyzed morphologically through light microscopy, and some species
    were sequenced genetically. The phylogenetic position of the species of Anacanthorus
    parasites of serrasalmids fish was investigated based on partial sequences of the 28S
    gene of 9 species of Anacanthorus, a new sequence of the species Mymarothecium
    viatorum, and 39 monogenean sequences retrieved from GenBank. The analyses
    support the monophyly of the anacanthorine, represented by Anacanthorus in this study,
    and the phylogenetic relationships between Anacanthorus spp. corresponded to the
    phylogenetic relationships among the three major lineages of Serrasalmidae (“pacus”,
    “Myleus-like pacus” and “true piranhas”). Two new species of Anacanthorus were
    found and described, the first from the gills of Serrasalmus maculatus, and the second
    from the gills of Myloplus schomburgkii, both differing from its congeners mainly by
    the morphology of the copulatory complex. Additionally, new hosts and geographical
    records were provided, together with new partial sequences of the mitochondrial
    cytochrome c oxidase subunit 1 gene (COI) of species of Anacanthorus.

4
  • NATALICE DOS SANTOS SALES
  • IMPORTANCE OF BIOTOPES AND AVAILABILITY OF FOOD RESOURCES IN THE STRUCTURE OF FISH METACOMUNITY IN A TROPICAL ESTUARY, NORTHEAST OF BRAZIL

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • ANA CRISTINA PETRY
  • FRANCISCO GERSON ARAUJO
  • LEONARDO MITRANO NEVES
  • LUCIANO NEVES DOS SANTOS
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • MIRIAM PILZ ALBRECHT
  • Data: May 23, 2019


  • Show Abstract
  • Mesohabitat heterogeneity of the tropical estuaries influences the patterns of fish richness and diversity, favoring, among other processes, recruitment and niche partitioning, allowing the coexistence of fish species in these ecosystems. The aim of present work is to analyze the different environmental factors of mesohabitats and their influence on the distribution of fish species. he study was carried out in a tropical estuary, located in the northeast of Brazil, and that presents a peculiar characteristic due to the strong influence of the semi-arid
    region, because in all its upper extension the river is intermittent, and for that reason there is small contribution from drainage basin arriving to the estuary. Fishes were collected using a beach-seine net during the rainy (June, July and August/2015) and dry (October and November/2015 and January/ 2016) seasons. Samplings were carried out in five mesohabitats present in the estuary: Beaches (PA), Sea grass beds (FM), Tidal mudflats (PM), Mangroves (MA) and Marginal Vegetation (VM). The results showed that Mudflats showed the greast density and biomass of juveniles among the mesohabitats. Salinity is the predictor factor influencing the distribution of the fish assemblages of PA, FM, PM and MA, whereas VM was influenced by MO, coarse sand, chlorophyll and transparency. Density and biomass showed highest values during the rainy season, indicating the importance of this period for the dynamics of estuarine fish assemblages in this region of scarce rains. Species in Marine Dependent Estuary (MED) guild showed numerical abundance, mainly by representatives
    of the families Gerreidae and Engraulidae. This abundance of species dependent on the estuary at a certain stage of development emphasizes the importance of this ecosystem as a nursery for several species of economic
    and/or ecological importance.

5
  • PILAR COZENDEY SILVA
  • STUDY OF THE RELATIONSHIP BETWEEN MORPHOLOGICAL ASPECTS OF TONGUES OF SIXTEEN SPECIES OF LIZARDS OCCURRING IN BRAZIL AND THEIR RESPECTIVE
    TYPES OF FORAGING

  • Advisor : ARMANDO SALES
  • COMMITTEE MEMBERS :
  • ARMANDO SALES
  • APARECIDA ALVES DO NASCIMENTO
  • LEILANE MARIA BARCELLOS NEPOMUCENO
  • CLARICE MACHADO DOS SANTOS
  • OSCAR ROCHA BARBOSA
  • SARAH SILVA MENDES
  • Data: May 31, 2019


  • Show Abstract
  • The Squamata reptiles have a sophisticated sensory system, frequently adapted to the
    environment in which they live and the activities performed in their foraging. The
    tongue lizards is a fundamental structure of the sensory system for foraging. Thus, this
    study sought investigate the morphological and histological tongue structure of 16
    species of Brazilian lizards and its relationship with ambush and active foraging. For
    that, were analyzed the shape and elongation and made histological slides of tongues
    specimens of the 16 species and colored by HE, PAS, Alcian Blue and Gomori Trichome.
    Scanning electron microscopy of the languages of 13 species was made. The tongue of
    all species showed stratified squamous keratinized epithelium, with the keratin layer
    varying in thickness and position in the tongue and also scale-like papillae, filiform
    papillae. Teiidae and Gymnophtalmidae lizards showed the most specialized tongue
    and restricted to wile foraging, while Leiosauridae, Gekkonidae, Polychrotidae and
    Tropiduridae lizards presented tongue with less favorable to tongue-flicking and
    therefore closest to ambush foraging structure. Mabuydae and Anguidae lizards
    species showed characteristics of both foraging types, showing a probable plasticity
    between the extremes of wile and ambush foraging. This fluctuation between types of
    foraging has been observed within the old genus Mabuya from previous studies that
    indicate that factors such as food availability and habitat changes are able to alter the
    dynamics of some species foraging. In this study it was possible to relate aspects such
    as types of papillae, tongue shape, muscular arrangement, keratin layer, among
    others, with the possible dynamics of foraging the 16 species. The muscle arrangement
    found in active foragers was considered more compact and focused for the tongue-
    flicking, while the ambush foragers muscle arrangement shown less restricted. And
    stand out from other factors such as the presence of taste buds. The analysis of
    external and microscopic characteristics of the tongue provided great contributions to
    the understanding of how the lizard optimizes its environment perception, as realize
    the time and its energy expenditure. Also contributes with more information about the
    morphology and ecology of species occurring in Brazil.

6
  • ROSA DA SILVA SANTOS
  • Ecomorphological patterns in fish from a tropical bay in southeastern Brazil: approaches using shape of the sagittae otoliths, body shape and diet.

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • JAYME MAGALHAES SANTANGELO
  • FRANCISCO GERSON ARAUJO
  • LILIAN CASATTI
  • CARLOS ANTÓNIO DA SILVA ASSIS
  • ALEJANDRA VANINA VOLPEDO
  • Data: Aug 15, 2019


  • Show Abstract
  • Ecomorphology in fish is the study of the relationships between individuals&#39; body shape
    and their ecological function, based on the comparison between patterns of variation in
    shape and patterns of variation of morphological attributes such as feeding habits and
    niche exploration. Based on this principle, we sought to identify the ecomorphological
    patterns related to the shape of the sagittae otoliths, body shape, and diet of species that
    make up the fish assemblage of a tropical bay in southeastern Brazil.The ichthyofauna
    sampled came from the shrimp trawling, and was dominated by small-sized individuals
    (subadults) and comprised 22 species. In the Second Chapter, the cluster analysis on the
    contour data of the otoliths (Fourier Ellipses Analysis - EFA) resulted in the
    identification of 9 groups. The different otoliths patterns indicate different functions,
    from the longer and wider otoliths (associated with greater auditory capacity with
    botton foraging) to smaller and narrower otoliths with prominent rostra (associated with
    greater swimming capacity and less need for acoustic communication). A significant
    correlation was found between the size of the otoliths in relation to the size of the fish
    for benthic species and that they have large otoliths (M. furnieri, P. brasiliensis and O.
    ruber). For the other species, the size of the otolith did not present consistent change as
    function of the size of the individuals that are mostly juveniles. In the Third Chapter, 17
    morphometric measurements were taken for the calculation of 10 ecomorphological
    attributes, which were used to interpret the life habits and a better understanding of the
    adaptations and occupation of different habitat use. The Principal Components Analysis
    applied to the ecomorphological attributes allowed the identification of eight groups of
    fish. The ecomorphological attributes that most influenced the division of the groups
    were compression index (CI), caudal peduncle compression index (ICPCd), relative
    height (RA), relative eye position (PRO) and relative head length (CRC). Therefore, the
    fish that most differed in this analyses were the Pleuronectiformes (with high bodies
    laterally compressed, indicating to be able to vertical displacements with limited
    maneuverability) and the Scorpaeniformes (with eyes positioned dorsally and with a
    relatively long head indicating benthic habits capable of catching relatively large prey),
    suggesting different ways to explore the environment.In the Fourth Chapter, through the
    bibliographic survey based on secondary data, it can be concluded that the great
    majority of the species studied are carnivorous ichthyophagous (13 species), of which
    some practice cannibalism. It was noticiable the use of crustaceans (Decapoda,
    Brachyura, Mysidacea), annelids (Polychaeta, Nereidae) and molluscs (Gastropoda,
    Bivalvia, Cephalopoda) as food items of almost all species, with the exception of
    Engraulidae Cetengraulis edentulus which was the only exclusively herbivorous species
    preying on phytoplankton components.This species was isolated from the others in the
    three approaches, presenting high values of ARB, ABO and CRPCd, as well as
    differentiated otoliths with prominent rostra, dented ventral border and quite different
    feeding habits. These characteristics constrain this species to remain in an isolated
    group in the three approaches. Gerreidae Eucinostomus gula and Eucinostomus
    argenteus presented consistent similarity in both body morphology, otolith morphology
    and feeding habits. This consistent similarity was also found for Menticirrhus
    americanus and Paralonchurus brasiliensis, which also remained grouped together in
    all three approaches.The Pleuronectiformes did not form a consistent group in the 16different approaches, but were always organized in neighboring groups demonstrating acertain level of similarity between them, depending on the level of cut of thedendograms. Cathorops spixii was not used in the otolith morphology approach, but itremained with Orthopristis ruber in the chapters on body morphology and diet. The Sciaenidae stayed together in the body ecomorphology approach (except S. rastrifer) and separated in the ecomorphology approaches of the otoliths and diet, maintainingproximity forming neighboring groups in the dendrograms of the different analyzes. The results demonstrated the existence of an association between body morphology and otoliths, and the life and exploitation habits of resources, particularly those related to food.

7
  • JOÃO RICARDO CARREIRA ALVES
  • FLEBOTOMINAL FAUNA (DIPTERA: PSYCHODIDAE; PHLEBOTOMINAE) AND VECTOR IDENTIFICATION OF Leishmania sp. IN THE REGION OF CAVES, SUMIDOURO CITY, STATE OF RIO DE JANEIRO, BRAZIL

  • Advisor : JACENIR REIS DOS SANTOS MALLET
  • COMMITTEE MEMBERS :
  • JACENIR REIS DOS SANTOS MALLET
  • SIMONE PATRICIA CARNEIRO DE FREITAS
  • RODRIGO CALDAS MENEZES
  • RENATO DA SILVA JUNIOR
  • NATALY ARAÚJO SOUZA
  • BRUNO MOREIRA DE CARVALHO
  • ANGELA ALVES DE ALMEIDA
  • Data: Aug 30, 2019


  • Show Abstract
  • In order to know the phlebotomine fauna of Sítio Portão de Pedra, municipality of Sumidouro,
    Rio de Janeiro, catches were made in 2009 and 2010, in a cave, around the cave and in the
    Atlantic Forest in the region, with a view to a case report of American cutaneous leishmaniasis
    was recorded in 2007. 1756 sandflies belonging to 14 species were captured, of which 11 were
    Lutzomyia: Lutzomyia gasparviannai Martins, Godoy & Silva, 1962b, L. edwardsi
    (Mangabeira, 1946), L. tupynambai (Mangabeira) , 1942b), L. hirsuta hirsuta (Mangabeira,
    1942b), L. whitmani (Antunes & Coutinho, 1939), L. davisi (Root, 1934), L. migonei (France,
    1920), L. microps (Mangabeira, 1942a). ), L. cortelezzii (Brethés, 1923), L. quinquefer (Dyar,
    1929), L. sp. and three Brumptomyia species: Brumptomyia brumpti (Larrouse, 1920), B.
    guimaraesi (Coutinho & Barreto, 1941a) and B. sp. L. gasparviannai was predominant in all
    collection sites (67.3%), being more frequent in the forest (73.8%). Torrential rains and
    landslides, which occurred from January 11 to 12, 2011, mainly on the mountain slopes of the
    highland region of Rio de Janeiro state, would affect the ecology of sandfly species at the Portão
    de Pedra site, municipality of Sumidouro, State of Rio de Janeiro, Brazil. The predominant
    species, in 2009/2010, was L. gasparviannai with 67.3% of the collected specimens. This
    research confirms the prevalence of this species, but with a marked difference (47.2%). L.
    gasparviannai predominated in the collections made in the cave, around the cave and in the
    Atlantic Forest. The fauna diversity was higher in the previous period, with 14 species collected,
    while in the present study there were 9 species. The species of medical importance, L. whitmani,
    L. migonei, L. hirsuta hirsuta and L. davisi were more quantitative (65) in 2009/10, while in
    this period there were 38 specimens. 2323 sandflies belonging to 9 species were captured, being
    8 of the genus Lutzomyia: L. gasparviannai, L. edwardsi, L. tupynambai, L. hirsuta hirsuta, L.
    whitmani, L. migonei, L. intermedia, L. sp. and one species of Brumptomyia: B. brumpti. It is
    reported that nematode-infected L. edwardsi found in 2009 and 2010, five years later, found
    Wuchereria bancrofti infected L. gasparviannai, both species were collected in the cave. In
    order to evaluate the relationship between climatic indices and the three most frequent species,
    a Poisson regression was performed. The results showed that the relative humidity showed
    significant differences (p <0.01) for L. gasparviannai, L. edwardsi and L. tupynambai. For
    temperature only L. tupynambai was significant. In the cave and Atlantic Forest collections,
    significant differences occurred in the three species (p <0.01). When comparing the Cave
    Surroundings and the Atlantic Forest and the periods 2009 and 2010 with 2015 and 2016, the

    X

    species L. edwardsi and L. tupynambai showed significant results (p <0.01). To evaluate the
    differences between the SISA results, an analysis of variance (ANOVA) was performed, which
    found significant differences between the values SISA of the three species (p - value = 0.004).

8
  • LUIZ FELIPE DE ANDRADE
  • Taxonomy and distribution of the family Phoxocephalidae G. O. Sars, 1891 (Crustacea: Amphipoda) from continental shelf and deep sea of southwestern atlantic

  • Advisor : ANDRÉ RESENDE DE SENNA
  • COMMITTEE MEMBERS :
  • ANA CLAUDIA DOS SANTOS BRASIL
  • ANDRÉ RESENDE DE SENNA
  • HELIO RICARDO DA SILVA
  • KARINA ANNES KEUNECKE
  • CAROLINA TAVARES SCHUMMAN
  • JESSER FIDÉLIS DE SOUZA FILHO
  • ALESSANDRO PONCE DE LEÃO GIUPPONI
  • Data: Oct 30, 2019


  • Show Abstract
  • The family Phoxocephalidae G. O. Sars, 1891, is one of the most diverse amphipod taxa in terms of taxonomic characters, being grouped in the suborder Amphilochidea Boeck, 1871. The most stable characters that characterize the family include: antennae 1 and 2 haustorioid in shape, with multiarticulate accessory flagellum; gnathopods 1 and 2 chelated or subchelated; relation between shape and size of pereopods 6 and 7 (both posteriorly expanded, adapted to the fossorial habit, but pereopod 7 shorter than pereopod 6); uropod 3 with inner ramus present; and telson deeply cleft. The Phoxocephalidae are benthic, living mostly buried in the substrate, and are widely distributed bathymetrically, being found from shallow waters to the deep sea. The material examined was collected off the Atlantic coast of South America, from north of the state of Rio de Janeiro to Mar del Plata, Argentina, from 1969 to 1972, at depths ranging from 15 to 500 meters. The campaigns were organized by the Instituto Oceanográfico from Universidade de São Paulo (IO-USP), using two research vessels, R/V Almirante Saldanha and R/V Prof. W. Besnard, being the latter, part of the MBT (Mini Biological Trawl) project. All specimens are preserved in ethanol 70% and are be deposited at the Crustacea Collection of the Universidade do Estado do Rio de Janeiro (UERJ). For the taxonomic study, the appendages and mouthparts were dissected and mounted in glycerin gel slides, drawn under an optical microscope with camera lucida, Motic-BA 310, and digitalized with CorelDRAW 2018. After the analysis of samples from 33 stations, it was possible to identify 19 species of Phoxocephalidae to date, grouped into 8 known genera, plus the description of a new genus belonging to the subfamily Phoxocephalinae. From this total, we described nine new species grouped in the following genera: Cephalophoxoides Gurjanova, 1977; Heterophoxus Shoemaker, 1925; Limnoporeia Fearn-Wannan, 1968; Phoxocephalinae gen. nov; and Pseudharpinia Schellenberg, 1931. The species Metharpinia dentiurosoma, Alonso de Pina, 2003b, M. grandirama Alonso de Pina, 2003b and M. iado Alonso de Pina 2003a, known only for Argentina were recorded for Brazilian waters for the first time. Besides that, the following species had their distribution extended: M. protuberantis Alonso de Pina, 2001; Microphoxus cornutus (Schellenberg, 1931); Mi. uroserratus Bustamante, 2002; Fuegiphoxus abjectus J.L. Barnard & C.M. Barnard, 1980; F. fuegiensis (Schellenberg 1931); P. tupinamba Senna & Souza-Filho, 2011; and Parafoxiphalus longicarpus Alonso de Pina, 2001. Identification keys to the world were created when necessary or updated to all genera of Phoxocephalidae found in the campaigns. Distribution maps were prepared for all new species described using the software QGIS 3.2.1

9
  • JOSÉ PAULO DO CARMO SILVA
  • The use of morphometry and microchemistry of the saggitae otolits and genetic markers as tools to investigate the population connectivity of Mugil liza (Valenciennes, 1836) on the the southeastern coast of Brazil

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • JAYME MAGALHAES SANTANGELO
  • RAFAEL DE ALMEIDA TUBINO
  • MAGDA FERNANDES DE ANDRADE TUBINO
  • RAFAEL JARDIM ALBIERI
  • MARCIA CRISTINA COSTA DE AZEVEDO
  • MARCUS RODRIGUES DA COSTA
  • RAQUEL RENNÓ MASCARENHAS MARTINS
  • Data: Dec 19, 2019


  • Show Abstract
  • The study aims to investigate the connectivity of an important fishery resource along the southeastern Brazilian coast of (mullet, Mugil liza) between semi-closed coastal systems and the adjacent coastal zone, aiming to provide subsidies for preservation and sustainable use. Two approaches were used to achieve these objectives, which correspond to the two chapters of the Thesis: 1. Morphometry of the Sagittae otolith; 2. Biochemistry of the Sagittae otolith. The fishes were collected along about 612 km, covering the coast of the states of Rio de Jneiro and São Paulo, in the following semi-closed systems and in their respective adjacent coastal zones: estuaries of Santos/Guarujá and proximities of Caraguatatuba/Ilha Bela; bays of Sepetiba/Ilha Grande and Guanabara; and the coastal lagoons of Saquaremma and Maricá. We investigated, through the two approaches, the existence of different population groups throughout the study area, the population connectivity between the systems and the stocks/populations, and the existence of different pattern of individual movements within the different systems (lagoons, bays and estuaries). In the first chapter we tested the existence of different stocks of mullets along the coast of the states of São Paulo and Rio de Janeiro. Assuming that different morphotypes and/or variations in otolith shape may represent different populations/stocks, we tested the hypothesis that there is more than one Mugil liza stock/population across the study area. For this, we used Fourier elliptical descriptors and morphometric indices to identify variations in the shape of otoliths throughout the study area. A geographical pattern of separation, suggesting the existence of at least two stocks/populations throughout the study area was detected, and the presence of three otolith morphotypes that did not show a clinal distribution pattern was found, suggesting that the study area is a transition area for different stocks / populations of M. liza. In the second chapter, the patterns of movement and use of semi-closed systems and open coastal zone were studied. Assuming that mullets use estuarine systems during the early phase of their life cycle and migrate to the platform as adults, to be part of the migratory/spawning stock of the species. We tested the hypothesis that there is an individual differentiation of use, with some individuals returning to the estuarine environment after spawning and some others individuals do not need to exit estuarine systems to complete their life cycle. For this, the elemental strontium and barium profiles of the mullets captured within the main estuarine systems and respective coastal zone sites were evaluated. Sr concentrations along the nucleus-edge (life history) and nucleus (birth areas) axis suggest distinct populations / stocks and birth areas in both the adjacent platform and the estuarine region. Three movement profiles were identified, with the most common named Marine Visitors (MV), representing connections between estuarine and marine environments. The second profile was named Estuarine Resident Estuarine (ER), comprising individuals who remained in the estuarine environment during their life cycle. Finally, the third identified profile was named Marine Migrator (MM), represented by individuals who remained in estuarine environments during the early stages of the life cycle and apparently migrated permanently to the marine environment. In this study, the great plasticity of this species was observed in the use of adjacent estuarine and coastal environments, a possible adaptation to the euriraline conditions that allow the persistence of stocks / populations in high abundance in this transition region between the temperate and tropical areas of southeastern Brazil. Brazil.

2018
Dissertations
1
  • FLAVIA SOUZA DA MOTTA
  • Taxonomic revision of Neotrephes China, 1936 (Insecta: Hemiptera: Heteroptera)

  • Advisor : FELIPE FERRAZ FIGUEIREDO MOREIRA
  • COMMITTEE MEMBERS :
  • FRANCISCO GERSON ARAUJO
  • FELIPE FERRAZ FIGUEIREDO MOREIRA
  • RAFAEL BENZI BRAGA
  • Data: Aug 16, 2018


  • Show Abstract
  • Hemiptera is one of the main orders of insects and is currently divided in four suborders. Among them, only Heteroptera has representatives intimately related to water bodies, of which those that live primarily submerged belong to the infraorder Nepomorpha. The nepomorphan family Helotrephidae is represented in South America by only the subfamily Neotrephinae, which has two genera: Neotrephes China, 1936e Paratrephes China, 1940.
    Studies about these insects in South America are scarse in comparison with other regions. Neotrephes is characterized by the short labium, not reaching to the mid coxae, and has nine valid species: N. fragosus Nieser & Chen, 2002, N. jaczewskii China, 1940,N. lanemeloi Nieser & Chen, 2002, N. latus Nieser & Chen, 2002, N. minutus Nieser & Chen, 2002, Nplaumanni China, 1940, N. transversus Nieser & Chen, 2002,N. usingeri China, 1936,andNvariegatus Nieser & Chen, 2002. For the presente study, more than 1,200 specimens of the genus have been examined, amog which there are holotypes and paratypes. We presente here redescriptions of the genus and its known species, descriptions of three new species, an identification key including all these species, illustrations, several new records, and maps of geographic distribution. Additionaly, we record the occurrence of wide intraspecific chromatic variation and a small number of diagnostic structural features. Therefore, the precise identification of specimens is only possible through the examination of male and female terminalia.

2
  • GEYSA DA SILVA CAMILO
  • Intraspecific variation of functional traits in freshwater fish from lentic and lotic systems in Southeast Brazil

  • Advisor : FRANCISCO GERSON ARAUJO
  • COMMITTEE MEMBERS :
  • BENJAMIN CARVALHO TEIXEIRA PINTO
  • FRANCISCO GERSON ARAUJO
  • JARBAS MARCAL DE QUEIROZ
  • MIRIAM PILZ ALBRECHT
  • Data: Aug 31, 2018


  • Show Abstract
  • The intraspecific variation reflects differences in characteristics of the organisms in a given population, and is one of the most important aspects of evolutionary and ecological theories. The aim of this study was to investigate the magnitude and direction of intraspecific variation in fish species between two different types of aquatic systems (lentic and lotic) in Southeast Brazil. Twenty functional characteristics were measured
    and analyzed in 10 individuals of six species in each system (reservoirs and rivers). The tested hypothesis is that intraspecific variation would be greater in lotic environments because we expect greater variation in species traits of individuals in heterogeneous systems with greater habitat availability. According to the intraspecific coefficient of variation for each trait in each species, intraspecific variation was higher in lentic systems,
    which is contrary to our initial hypothesis. According to the Analysis of Covariance to test the effect of the lentic and lotic systems in each species, removing the size effect, the traits oral gape, body depth, body width and gut length were those that most differed significantly between the lentic and lotic environments, being frequently greater in the lentic systems. For both lotic and lentic systems, the traits oral gape, pectoral fin height,
    gut length, oocyte diameter, oocyte number and gonadosomatic index had greater variation at the intraspecific level (Relative Intraespecific Variation > 60% ), whereas the traits eye diameter, pelvic fin length and dorsal fin length varied more at the interspecific level (Relative Intraspecific Variation < 25%). The traits eye diameter, eye position, body width, pectoral fin length, pelvic fin height and length, caudal fin height and length, dorsal
    fin height and length, anal fin height, and gill raker length had low relative intraspecific variation in both systems and therefore are better to be associated with environmental characteristics.


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